Nematolebias whitei (Rio pearlfish): 119420162
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Entry
119420162 CDS
T08042
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119420162 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119420162 (chrne)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119420162 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119420162
NCBI-ProteinID:
XP_037543469
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Position
14:complement(38711772..38725893)
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AA seq
519 aa
AA seq
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MAVRGFGIFFGLVVFWGTFEGLVECNEESILIRDLFKGYNKNIRPTVNPENKVEVQIKLT
LTNLISLNEKEETLTTNVWIEIQWLDYRLVWNPAEYYGIEVLRVPYNTVWLPDIVLENNI
DGKFDVAYYANVLISNTGSMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTYSANEL
DLILPMEKSQTFEWVHIDPAAFTENGEWTIVHRPARKMINKQYTPDDLEYQEITFNLIIQ
RKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKVPET
SLSVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPNTHIMSHSVKHLFLEMVPRFLGMS
PLVDDSDVTAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMLFDKQRERHGLNQSIVNNI
DVSSTANLYKSLAQAAPEIKQCVDACNFIAESKRQQNDFGSEIESWVLIGKMIDKVCFWA
AILLFIIGTVGVFLTGHFNRAPEFPFQGDSKKYVPINVD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgtggttttgggatattttttggccttgtagttttttgggggacttttgaa
ggcctggtggaatgtaacgaggaatcgattctgatcagagacttgttcaaaggctacaac
aagaacattcgtccaacggtgaatcctgaaaacaaagtggaggttcagatcaagttgacg
ctcacgaacctcatctccctgaatgaaaaggaggagactcttacaaccaacgtatggatc
gagattcaatggttggattatcgccttgtctggaacccagctgagtattacggcattgaa
gtcctccgtgtcccatacaatacagtctggcttcctgacatagtcctggagaataatatt
gatggaaagttcgatgtcgcttactatgctaatgtgttgatcagcaacactggttcgatg
tactggctgcctcctgccatctaccgtagcacctgtgccattgagatcacctatttcccc
tttgattatcaaaattgcacactggtattcagatcccagacatacagtgccaatgagttg
gacctgatattgccgatggaaaaaagccaaacttttgagtgggtgcatattgaccccgca
gctttcacagagaatggtgagtggaccattgtccatagaccggccaggaagatgatcaac
aagcagtatactccagacgacctggagtatcaggaaatcacgttcaatctgatcatccaa
aggaagccccttttttacatcatcaacatcatcttgccatgctccctcatctcgtcactg
gttgtactggcctacttcctacctgcacaagctggaggacaaaagttgactgtggccatc
tctgtcttgctggctcagactgtcttcctcttccttattgctcagaaggtgcctgagact
tccctttctgtccctctgatcggcaagtatctgatctttgtcatgtgtgtcaccactctc
attgctaccaatcaaatcgtggtgctgaacttctcgctgcgcagcccgaacactcacatc
atgtcccacagcgttaagcatctctttttggaaatggtgcctcgcttcctgggcatgtcc
ccactggtggatgacagtgatgtgacggctgaggtgaacggtgtgagggagcggcggcgc
agctcattcggcctcatgcagagagcagaggaatacgtgctgaaacagccgcgcagcgaa
atgctgtttgacaagcagagagagagacatggactcaatcaatcgattgtaaataatata
gacgtcagcagcacagccaacctgtataaaagtttggcccaggctgcacctgagatcaag
caatgtgtggatgcctgcaactttatcgccgagagcaaaaggcaacaaaatgactttgga
tctgaaattgaaagctgggttctgattggaaagatgattgataaagtgtgtttctgggct
gcgatcctcctcttcatcatcggcacggtgggagtcttcctaacgggacacttcaaccga
gcaccagaatttccatttcaaggagacagcaaaaaatatgtcccgattaatgtggattaa
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