Nematolebias whitei (Rio pearlfish): 119420215
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Entry
119420215 CDS
T08042
Symbol
pdzd3b
Name
(RefSeq) PDZ domain containing 3b
KO
K24059
PDZ domain-containing protein 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119420215 (pdzd3b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
119420215 (pdzd3b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
DUF6288
Motif
Other DBs
NCBI-GeneID:
119420215
NCBI-ProteinID:
XP_037543530
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All DBs
Position
14:complement(42565334..42583827)
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AA seq
503 aa
AA seq
DB search
MTSGRGVTLTEKFTQNPKEGIDNPAMVFTDCTDSVSTPRPRLCVLKREDGEAFGFNLRVE
RDCNGHVIRNVVSGGIAERSGLRDGDRLLEVNNCYIDDVPHPEVSRKIKLSGHQLCLLVL
DGEEYEQTVSQGQNLQTLVKAHKEEGCKPPRLCHITKDSASGLGISFTPLEGERGRFSVS
LVKGGAAEKAGVCKGDHLVWMNGAMVSHLTHAALSRMMKKCGNAITILVIDSESEKIYMQ
KTMPILPAMAVSHKLPFKARKLHLIPGPSGYGFLLRLEKTPSGNTYHVLREVDKGSPAEK
GGMKDGELLLEVNGESVESLQHDDIVDRVRLSRTQVSLTTITPSGLDFYTKLGLSPLLFC
EDDAAEEEKDENVPASAEVQLSSKKNSDSCSPRLCTVQKGPLGFGFDLDHVPQRPGISIS
QVASGGSAEKAGLVVGDVVLEVNGQNVEKKQLEDVMKLVEKEKSILSLLIKDQTSYNKMT
TADVSTSDVTSKEEEDDYEISVL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaggcagaggcgtcacgttaacagagaaatttacacaaaatccaaaagaagga
atagataacccagcgatggtcttcacagactgcacagactccgtgtcgacacccaggcct
cgcctgtgtgttttgaaacgagaagacggggaggcttttggctttaacctgcgggtggag
agagactgcaatggacacgtgatcagaaatgtggtgtcaggaggcatagcggagcgcagt
ggtcttcgggatggagacagacttctggaggtcaacaactgctacattgatgatgttcct
caccctgaggtgtctagaaagataaagcttagtggacaccagttgtgcttgttagtgcta
gatggagaggagtatgagcagactgtgtcacaaggccaaaacctccaaactctggtcaaa
gcccacaaggaagaaggctgcaaaccacctaggctctgccacatcaccaaggattctgcc
tcaggtctgggtatcagctttacacccctggaaggagagagaggtcgtttctctgtgagc
ctggtgaaaggaggcgcagctgaaaaggcgggggtgtgtaagggagatcacttggtgtgg
atgaatggagcaatggtgtcccatctcacacatgctgcactctcccgaatgatgaaaaag
tgtggcaatgctatcaccatcctggtgatagacagtgagagtgagaagatctacatgcaa
aagacaatgcccattctgcctgccatggccgtctcacacaagctgccttttaaagccaga
aagctccatttgatacctggaccttcggggtacggctttctccttcggctagagaaaaca
ccatcaggaaacacatatcatgttctgcgtgaggtggacaaaggcagtcctgcagagaag
ggaggaatgaaggatggagagctcttgctggaggtcaatggagagtcagtggagtcactg
cagcatgatgacattgtggacagagtgcgactgagtagaacgcaggtctccctcaccacc
atcactccctcggggctagacttttacaccaagctgggtctttctcctcttctgttttgt
gaggatgatgcagctgaggaagagaaggatgaaaatgtaccagcatctgcagaagttcag
ttatcgtcaaagaaaaacagtgactcatgcagtccaagactttgtacagtccaaaaaggt
cccctggggtttggctttgatctagaccatgtcccacagagacccggcatttcgatcagt
caggtagcttctggtggttctgcagagaaagctggacttgttgtgggggatgtagttttg
gaagtcaatgggcaaaatgtggagaagaaacaattggaagatgtgatgaagctggtggaa
aaagagaagagtattctttctttattgatcaaggatcagacaagctacaacaaaatgaca
acagctgatgtttcaacttctgatgtcaccagcaaagaggaagaagatgattatgagata
tctgttttataa
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