Nematolebias whitei (Rio pearlfish): 119420237
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Entry
119420237 CDS
T08042
Symbol
smfn
Name
(RefSeq) small fragment nuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119420237 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119420237 (smfn)
03009 Ribosome biogenesis [BR:
nwh03009
]
119420237 (smfn)
Messenger RNA biogenesis [BR:
nwh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119420237 (smfn)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
Pre-60S particles
RNases
119420237 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
119420237
NCBI-ProteinID:
XP_037543552
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All DBs
Position
14:45817900..45828426
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AA seq
199 aa
AA seq
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MSMCQRMVWVDLEMTGLDIEKDQIIEMACIITDCDLNIVAEGPNLIIKQSDELLDGMSDW
CKEHHGKSGLTQAVRDSKVILEQAEYEFLSFIRQHTPPGQCPLAGNSVHADKKFLDKYMP
QFMHHLHYRIIDVSTIKELCRRWFPEEYQKGPHKSSTHRALEDIQESIKELQYYRASIFK
ASAEEKKRKVVDEAGNNLN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtgtcagaggatggtgtgggtggacctggagatgacaggcttggacattgag
aaagatcaaatcatcgagatggcatgcatcatcacagactgtgacctgaacatcgtagct
gaagggcccaacttgattatcaagcagtcagatgagcttctggatgggatgtctgactgg
tgtaaagagcatcatggaaagtcaggactgacccaggccgtacgagacagtaaagttatt
ctggaacaagcagaatacgagtttctatcctttatcaggcagcacaccccccctggacag
tgtcctcttgctggcaactctgttcatgcagacaagaagtttctggataagtacatgcca
cagttcatgcaccaccttcactacaggatcattgatgtgagcaccatcaaggagctctgc
agacggtggtttccagaggaatatcaaaaggggcctcacaaaagctcaactcacagagct
ttggaggacatccaggagagcattaaagagctgcagtactacagagccagcatcttcaaa
gcttcagcggaggagaagaagcgcaaagttgtagacgaagcaggcaacaacttgaattag
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