Nematolebias whitei (Rio pearlfish): 119420241
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Entry
119420241 CDS
T08042
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119420241
04121 Ubiquitin system [BR:
nwh04121
]
119420241
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
119420241
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Atypical E3
119420241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
ADNP_N
Motif
Other DBs
NCBI-GeneID:
119420241
NCBI-ProteinID:
XP_037543557
LinkDB
All DBs
Position
14:complement(46406322..46408291)
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AA seq
588 aa
AA seq
DB search
MSSASQSSSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKST
HGVLDGRSPGPQLSKAASGGAAEAGRQHGERVDRSRGEYGASSRLLNGLHRPEDAAMSEG
SRQSPNTRRVAAAVPALHSTISHALMAQGLVAAPHGLLAPLAGSRSGVTPIAVSAGPIMA
EAGRRQAVALGVGAGTSALLGLDPAVWRNSEVMAELNEVARSRVEGWPGQPKAVRDVLVA
LSSSVPFNVRFRKDHNLLGRVLAFDASTVPEFELKVFVEYPVGSGIIFSGVPDLVRQMFR
DSAKDAGKAVNSGLRYVEYEKRHGSGDWRVLSELLNDGVRMFKEPPIPEVLPQPDPVPSL
AAAGRPAPAKGTTRRRKASPGSENGESDGRPDHAAREPWSRGAYTEALAGMAVPQEGPPR
LHSQPSPISALMGVADSLTSSQMARDSPSMSAGHSSAAGRSSSSSPSTASTSASQAAMGG
QGLSAVGPSSSSVSGESTSSTQAVLCCTLCRERLEDTHFVQCPSVPHHKFCFPCTRGFIR
SQGPGGEVYCPSGERCPLAGSTVPWAFMQGEISTILAVEREVTVKKEE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcctcgcagtcttcctccagacgccagtggtgctacctgtgcgatctgccc
aagatgccgtgggccatgctgtgggagttcagcgaggcggtgtgtcggggctgcgtgaat
tacgacggcgcggaccggatcgagctcctcatcgagacggcgcggcagctgaagagcacc
cacggggtcctggacggcaggtccccgggtccgcagctcagtaaagccgcgtcgggcgga
gccgcggaggccgggcggcagcacggggagcgcgtggacaggagccggggggagtacgga
gcctcctcccgcctcctcaacggcctgcacagacctgaggacgcagccatgtccgagggg
agtcgtcagagcccgaacacgcggcgtgtggccgcggccgtgccggccctccacagcacc
atctcccacgcgctaatggctcaggggctggtggcggcgcctcacgggctgctggccccg
ttagccgggtccaggtctggagtgacacccattgcagtttcagctggtcccataatggct
gaggcaggcaggaggcaggcggtggccctgggtgtgggggccggcacctcggccctgctg
ggtttggaccctgcagtttggaggaacagtgaggtgatggcagagctgaacgaggtggcc
cgcagccgggtggagggctggcccggtcagcccaaagcggtccgggacgtgctcgtggct
ctcagcagctctgtccctttcaacgtgcgcttcaggaaagaccacaacctgctgggtcgc
gtcctggccttcgacgccagcaccgttcccgagttcgagctgaaggtgtttgtggagtac
cccgtgggctcaggaatcatcttttctggagtcccagacctggttcgccagatgtttcgt
gattctgccaaagatgccggcaaagctgtgaactctgggctgagatatgtggaatatgag
aagcggcacggctccggagactggcgcgtgctgtctgagctgctcaacgacggcgtgagg
atgttcaaagaacccccgatcccagaggtcctaccccagccggacccggtgccgtcgctg
gcagctgctgggcgtcccgctccggcaaaaggaacgacgaggcgccgcaaagcttccccc
ggctctgagaacggagagagtgacgggagacccgaccatgcagcgagggagccctggtcc
agaggtgcctacacagaagcccttgcaggcatggctgttcctcaggagggccccccccgg
ctgcacagccagccgtcgcccatctcggcgctcatgggggtcgcagacagcctgacttct
agtcagatggccagagacagccccagcatgtccgctggccactcctcagcagcggggcgc
tccagcagcagcagtccctccaccgcctccacctcagcctcccaggcagccatggggggg
caaggtctgagcgcagtgggaccgagcagcagctcggtcagcggggagagcacgagcagc
acgcaggctgtgctctgctgcaccctctgcagagaacgcctggaggacacacactttgtc
cagtgtccctctgtcccgcaccacaagttctgtttcccgtgcacccgggggttcatccgc
agccaggggcctgggggggaggtgtactgcccgagcggggagcgctgcccactcgctgga
tccaccgtgccttgggccttcatgcagggggagatctctaccatcctggcagtggagcga
gaagtgacagtgaagaaggaagagtga
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