Nematolebias whitei (Rio pearlfish): 119420348
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Entry
119420348 CDS
T08042
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119420348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119420348
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119420348
Intermediate filaments
Intermediate filament-binding proteins
119420348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
119420348
NCBI-ProteinID:
XP_037543662
LinkDB
All DBs
Position
14:complement(46606067..46717269)
Genome browser
AA seq
1539 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIQEKPELRSVVQQK
LEEIRECWSDLETTTKAKARQLFENNKPEPAVKSYSDLDSQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGLSVPQRGLMAGDKEGAEQLGEVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGTNLQSVQHYLKKNQTLQ
RELTGRRARIEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLQLETERRSVMLDAAL
QAQQYYSEAAKVESWLSGQKLHVASEEKGTDEASTLQLLKAHLTLEQTVETYAETVGMLS
QQCQRLLELGHPESEQITKQQSHIDRLYVSLKDMVEHRKAKLEQQYWLYQLHKEVEELEK
WITEREAVAASTELGKDLEDVTALQEKFTKFASETFSTGEQRMEQVNKMVNEMIDCGHSD
AANIAEWKDGLNESWADLLELMETRRQMLAASHQLHRFFTDCKEVSAQITGKLKQLPEVR
ACQVNITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEHEVM
EAWKELLRSCEASHIQVTSVTDKVQFFSVVRENLMWMEGIMGQIRWDEPRDLTALEVMMK
QHQELKAKIDGRSKTIQQCADLGKILIAAGNTASEEIKEKLDCLLTKQRDLVEKWDKHQE
RLQCKQEKFQFAQETVKAEAWLKAKEPLISSKQEGEEAHAQTDEVEQLILRHEAFRKAAV
TWKERFSSLRQLSAAEKKQEEDKKTTPLSSRRMFPLSCLTPSVPSSSATSSFLRHSIPVH
VKHKPLQTSLDLGACSSTQRLTTTLASYNTVLNGSGYHGPDQQAGKLISTTYLGVNQQTT
GADSGFSASQSGGADISTYHGVNHQTAGSAESSGYYGVTTGCVGGMQNHLSGGKLGSSGN
ITQQPSSGSLGSPGFLTQQNMGSSGYLAQPQNFGSSVYLGQHPNMGSSGYLAQQPNMGSS
GYLAQQPNMGSSGYLAQQPNMGSSGYLAQQANMGSSGYLAQQPNMGSSGHLAQNYQGSGG
LGSSSYLAQNHYSSGSLGSSGYLVQSGGIMDPKMAYAWQHLKADFMQPKINHIHKAINPL
LEASRLQREQFGDIPMADMMGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQ
TSSEQEIQARLNELPLIVRQERYRRRIERQSSSEQEGSNKQRLQRQDSSDLEGSVKDGSD
KRSGEKRSTMAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRSDGRPRARDRPKPRRRPR
PKEPEGTRRSRSAPATGAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWVNV
YCVLKDGMMTFYKDARNHTTTYNGEPTVDLSNCSFDPSVGYKKKKNVFILQVNDGTNLVF
HARDEEDLKAWTSNITASIAEHDDMAKWDKPGTSSMDPDHSERKEKSEGDADMQSERSEL
GEGEQGSEKGEVSEKLDTSEIADKLECGAGGSSTSGKSK
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacactgcgcgggatgaggcacagaagctgcacaggaagtggctg
aaacaccaggcctttatgacagagctggcccgcaataaagaatggctggccaagatagaa
caggagggtcaagagctgatccaggagaagccggagctacgttcggtcgtgcagcaaaag
ctggaggagatcagggagtgctggtccgacctggagaccacaacaaaggctaaggcccgc
cagctttttgaaaataacaagcccgagccagcagtcaagagctattcagaccttgacagt
cagctgtcccatttggagcagcagccaccgcagctcgagcaggcacaccatctgcccacc
tttaatgaacagctccagaaattccaggctatggaatctcagattggggacttttacaag
gatgtgggagagttaggaagtttgcaggggctaagcgtaccccagcgaggcctgatggca
ggtgacaaagagggcgctgagcagttgggtgaagtggagacccgcatcgttcgactgatt
gagccactgaaggagagacgtcgcatcctgctggcctccaaggagatgcaccaagtagcc
caggatctggaagatgaaatactgtggatccaagagcggcttcccctggcctcctgcaag
gattatggaactaacctccagagtgtacagcactatctgaaaaagaaccagacacttcaa
cgagagctgacagggaggcgagcacgaattgaagaggttttagaccgggctggaattatt
gcctcactgagaactcctgaggtggactttgtgcgtgaaggggcggggcatgtgcgccag
ctgtgggaggttttgcagctggagacagaaaggagatctgtgatgctggatgctgcacta
caggctcagcagtactacagtgaggcagctaaagtggagtcctggctatcagggcagaag
ctccatgtggccagtgaagaaaaaggaacagatgaggcaagtacactgcagctactaaag
gcccacctgactctggaacaaacagtggaaacctatgcagagacagtaggcatgctgtcc
cagcaatgccagcgtctactggagttgggacacccggagagtgagcagattacaaagcag
cagtcccacatagaccggctgtatgtgtcactcaaagacatggtggagcacagaaaggcc
aagctggaacaacagtactggctctaccagcttcacaaggaggtagaggagctagagaaa
tggatcactgagcgtgaggcagtggcagcttccacagagctgggcaaagacctggaggat
gtaacggcgcttcaggagaagttcaccaagtttgcctcagaaaccttcagcactggcgaa
cagcgcatggagcaagtgaacaaaatggtgaatgagatgattgactgtggtcactcagat
gcagccaacatcgcagagtggaaagatggactgaatgagtcatgggctgatctcctggag
ctcatggagacccgcagacagatgctggcagcatcacaccaactgcacagattcttcacc
gactgcaaggaggtctccgctcagattacaggtaaactgaagcagctgccagaggtgagg
gcgtgccaggtcaacatcaccaatccagctaccctgcagaggctcatgcactccttcgag
catgcccttcaactgctagttgcacaggtaaggcaactgcaggagaatgctgcccagttg
aggacaatctatgctggtgagaaagctgaggccattatggtcaaggaacacgaagtgatg
gaggcatggaaggaactgctgagatcttgtgaagccagtcatatccaggtgacttctgta
accgacaaggtgcagttcttctctgtggtgcgagaaaacttaatgtggatggaaggcatc
atgggccaaataagatgggacgagccgagggatttgacagctctggaagtgatgatgaaa
caacaccaggaactaaaagccaaaatagatggtcgcagcaagaccatccaacagtgtgca
gatcttggcaagattctgatagctgcaggcaacactgcatcagaggagataaaggagaag
ttggactgtcttttgactaagcaaagggatctagtggaaaaatgggacaagcaccaggaa
aggttgcagtgtaaacaagaaaaattccagtttgctcaggagacagtaaaggcagaggcc
tggctaaaagccaaggagccacttatctcatccaagcaagagggagaagaggcccatgcc
caaactgatgaggttgagcaactcatacttcgccatgaggccttccgcaaggctgctgta
acgtggaaagaacgcttcagctcccttcgccagctttccgcagctgagaagaaacaagag
gaggacaaaaagacaactccgctttctagtcgaaggatgttcccgttatcttgtctgact
cccagtgttccttcgagcagtgctacctcttctttcttgaggcattcaataccagttcat
gtgaaacacaaacctttacaaaccagcttggatttgggtgcctgttcctcaacccagaga
ttaacaacaacactagctagctataacacagttttaaatggatcaggctaccatggacca
gatcaacaagcaggaaagttgataagcaccacatacttaggtgtgaaccaacagacaact
ggagctgactctggtttctctgcatcccagagtggtggagcagacatttctacttaccat
ggggtaaatcaccaaacagctggtagtgcagagagttctggatactatggagtgaccact
ggctgtgtaggtggtatgcaaaatcatctatctggtggtaagttaggaagttcaggaaac
atcactcagcagccaagcagtggaagtctaggaagccctggctttctgactcaacaaaat
atgggcagttctggatatttggcacaaccacaaaattttggaagttctgtttatttggga
cagcaccctaatatgggaagctctgggtatttggcacaacagcctaatatgggaagctct
gggtatttggcacaacagcctaatatgggaagctctgggtatttggcacaacagcctaat
atggggagctctgggtatttggcacaacaggctaatatggggagctctgggtatttggca
caacagcctaatatggggagctctggacacctggcacagaattatcagggcagtggtgga
ttaggaagctcaagctatttggcacaaaatcattacagcagtggaagtttaggcagctct
ggttacctggttcagagtggaggcatcatggaccctaagatggcatatgcatggcagcac
ctgaaagctgacttcatgcagcccaagatcaatcacatacacaaagctataaaccctctt
ctggaggctagcagattgcagcgagaacagtttggggatattccaatggcagatatgatg
gggccagagtcaggactggaacttcttcatggccgtctccagagggatccccgtggtagt
cgttctgatccacagatggaccatctgaggcgagagcgagaatataaactgggaagacag
acctccagtgaacaggaaatccaagcccggctgaatgagctgccactaatagtgcggcag
gagcgttaccggaggcgcatcgagaggcagtcatccagtgaacaagagggcagcaacaag
cagaggctacagagacaggattcgagtgacctagagggctctgttaaagatggctctgac
aaacgctcaggggagaagagatccaccatggcagagattgtggaacaggtccaggagaga
gaggcagcacatgcacgtggagagccttatcgtcctcctagcagtctctcagcacccgtg
actcgttctgatggacgccctcgagctcgagaccgtcctaaacctaggaggcgtccccgt
ccaaaagaacctgagggaactcgccgttctcgctcagccccagctactggtgccccaaca
acaccccagccaccttctcacacagctcaaaatgaaggattcctctaccgtaaaaaggcc
accagcactgaccttgaagctcaacagaggagccccaacagcaaatcctgggtgaacgta
tactgtgtgctgaaagatggaatgatgactttctacaaagatgctaggaaccacaccaca
acatacaatggagagcccactgttgacctcagtaactgctcatttgatccttcagtgggg
tacaagaagaagaaaaatgtcttcattttgcaagtaaacgatggaaccaatttagtcttt
catgcaagagatgaggaggacttgaaggcttggacttcaaatatcaccgcctccatagct
gaacacgacgacatggctaagtgggacaagccaggcacctcatccatggaccctgaccac
tccgaaaggaaggagaagtcagaaggggacgcagacatgcagtcagaaaggtctgagctg
ggggagggggagcagggctcagagaaaggtgaagtctcagagaagttagacacgtctgaa
attgctgacaagttggaatgtggggcaggcgggtccagcacatccggaaaaagcaaatga
DBGET
integrated database retrieval system
