Nematolebias whitei (Rio pearlfish): 119420472
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Entry
119420472 CDS
T08042
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119420472 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119420472 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119420472 (pdlim4)
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Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119420472
NCBI-ProteinID:
XP_037543797
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Position
14:complement(12342266..12392558)
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AA seq
380 aa
AA seq
DB search
MPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILAINGDSTEHM
THMEAQNRIKMCSQHLTLSITRSGAGERVWSPTLSEDGKISPYMEHDSQNFRPITSGFGS
YGRKPSYTSEPHSPQPPQSPQPPLPPQPPLLTHLNNGHSRPNNGYSYGYGNGTGNAQYNN
PAGLYSHNGSNGDRVLPSKMGGLSLSATHSPEPPLQSPVGRNGFDPQSAVYKMLQDYEEP
VSEPKQSGSFKYLQEILEAEDGGMSPTERMRQLKSPIRSPIQKLGSPITNPVTNPVSGLQ
KLPQCTRCCNGIVGTIVKARDKLYHPDCFMCDDCGVNLKQRGYFFIEDNLYCETHAKARV
QPPEGYDVVAVYPNSKVELV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaccgtgacactgaagggaccctctccgtggggctttcggctggtgggagga
cgggacttcagcacaccgttaactatctccagggtaacacctggtagcaaggcagcccaa
ggtgacctgtgtccaggagacactatcctggctatcaatggtgacagcacagagcacatg
acacacatggaggctcagaacaggataaaaatgtgctcccagcacctcacactcagcata
acaagatcgggagctggagaaagagtgtggtcaccaacacttagtgaggacggcaagata
agtccttacatggagcatgactcacagaatttccgtcccatcaccagcggttttggcagt
tatggtcgaaaaccttcatatacatctgaaccgcattcccctcagccccctcagtctcct
cagccccctctgcctcctcagccccctctgctcactcacctgaataatggacactccagg
cccaacaacggctacagttatggatatggcaatggaaccgggaatgctcagtacaacaac
ccagcggggctttactctcacaatggcagcaatggagacagagtcttgccaagcaagatg
gggggtctcagcctgagtgccacacacagcccagagcctcccctacagtcccctgtgggc
cgtaatggtttcgacccccagtcagccgtctacaagatgctgcaggactacgaagagccc
gtctctgagcccaaacagtctggctccttcaaataccttcaggagatcctggaagctgag
gatggaggcatgtcgccgacagagagaatgagacagttaaagtctcccatcagatctcca
atacaaaaattgggcagccccattaccaacccagttaccaacccagtatctggtcttcag
aagctaccccagtgcacgcgctgttgtaacggcattgttggcaccatcgtgaaggccaga
gacaagctctaccatcctgactgcttcatgtgcgacgactgcggcgtcaacctcaagcag
aggggatacttcttcatcgaggacaatctgtactgtgagacccacgccaaggctcgcgtc
caaccccctgagggctacgacgttgtggctgtttaccccaactccaaggtggagttggtc
taa
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