Nematolebias whitei (Rio pearlfish): 119420480
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Entry
119420480 CDS
T08042
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119420480
04082 Neuroactive ligand signaling
119420480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119420480
Ion channels [BR:
nwh04040
]
Ligand-gated channels
GABA-A
119420480
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Ortholog
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
119420480
NCBI-ProteinID:
XP_037543806
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Position
14:complement(12912162..12965106)
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AA seq
525 aa
AA seq
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MFASRIRRMKTACVCFFPFIVAVARAQSAGVNDPSNMPLVKETVDRLLKGYDIRLRPDFG
GPPVRVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFHWRGGKNAVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGQGPQRQKKAAEKTATANNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLAGHDSMWEPIFMDDAAIGLGDQKNKMDPHENILLG
TLDIKNDMGVTELALGLNDPRNTMLTYDSSNLQYRKAGLARHNFGRNALERHMSHKKSRL
RRRASQLKITIPDLTDVNSIDKWSRMIFPTVFSFFNIVYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgtcaagaataagaagaatgaagactgcgtgcgtctgttttttccccttcata
gtggccgtggcgcgcgctcagagcgccggtgtcaatgacccgagcaatatgcccctggtc
aaagaaacggtggacagactcttgaagggttatgatatccgactgagaccagattttgga
ggtcctcccgtgagagtgggaatgaacatagacatatccagcatagacatggtgtccgag
gtgaatatggactatacattgacaatgtacttccagcaggcctggcgagacaagcggctg
tcctactctgagattccactcaacctgaccttagataaccgggtagcagaccagctctgg
gtccccgacacctacttccttaacgacaagaaatcgtttgtccatggtgtcactgtgaaa
aacagaatgatccgactgcacccagatggcaccgtactatatggactgaggatcactact
acagctgcttgtatgatggacctaagaaggtatccgctggatgaacaaaactgcacgctt
gagatagagagttatggctacactactgatgacattgaattccactggcgaggaggaaaa
aatgcagtgacaggagtggacaagatcgaactaccccagttctccattgtggatcacaag
ctcatctcgaaaaacgttgtattctccacaggctcttaccctcgtctctccttgagtttt
aagctaaaaaggaatattggatatttcatcctgcagacatacatgccttctattcttatc
accatcctctcctgggtctccttctggattaactatgatgcctctgctgccagagtggct
ctaggtatcaccacggtcctcaccatgacaaccattaacacccacctgagagaaaccctc
cccaaaatcccatatgtcaaggccatagacatgtacttgatgggctgctttgtgtttgtc
ttcctggccttactggagtatgcactggtgaactacatcttctttggtcagggtccacaa
cgtcagaaaaaagcagctgagaagacagcaacagcaaacaatgaaaagatgagaatggat
ccaaacaagtggctcgtggggaatgtagttggcagagatgataccctgtatgcaagaatg
aaacaaagagatctggctggccatgactccatgtgggagccaatttttatggatgatgca
gcaattggacttggggatcaaaaaaataagatggatccacatgaaaacatcctcttgggc
actctggatatcaagaatgacatgggcgtcacagagctggctctgggtctgaatgaccca
cgaaacaccatgttaacatacgacagctcaaatctacaatatcgtaaagcaggcctggcg
aggcacaactttggccgaaatgcactggagcgccatatgtctcataagaagagccgacta
cggaggcgggcttcacagttaaaaatcaccatcccagacttgactgatgtaaactccatt
gacaaatggtcaaggatgattttccccacagttttttccttcttcaatattgtttactgg
ctttactatgtcaactaa
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