KEGG   Nematolebias whitei (Rio pearlfish): 119420510
Entry
119420510         CDS       T08042                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh00565  Ether lipid metabolism
nwh01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    119420510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nwh03036]
    119420510
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nwh04147]
    119420510
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119420510
Exosome [BR:nwh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119420510
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Nup120_160 LisH Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_RFWD3 LisH_PAC1 Beta-prop_SPT8 eIF2A Beta-prop_DCAF12 Nucleoporin_N Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc ARMC9_LisH DUF7800 SutA-RBD LisH_2
Other DBs
NCBI-GeneID: 119420510
NCBI-ProteinID: XP_037543846
LinkDB
Position
14:16825156..16840572
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDINEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEVKEDITYGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
NVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDHTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFAGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPDSAHPTILDATGLE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGICLMTLVGHDNWVRGVLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKSAPYVVTGSVDQSVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcgcagagacaaagagatgaactaaatcgtgctatagctgactatctacgt
tctaatggatatgaggaggcttattccactttcaagaaagaagcagaattagatataaat
gaagaagtagataagaaatatgctgggcttttggaaaagaaatggacctctgttatcaga
ttacagaagaaggtaatggagttggaatcaaagctgaatgaggtgaaggaggacataacg
tacggaggacccgtgggtcagaagagggaccccaaggagtggatcccccgtcccccagag
agatacgccctgagtgggcaccgtgctccagtcacacgggtcatattccatcctgtgttc
aatgtcatggtcacagcctctgaagatgctaccatcaaggtgtgggactatgaagctggg
gactttgagcggaccctcaaaggccacacagactctgtgcaggacatctcgtttgaccac
acagggaagctgctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
gggtttgaatgcatccgaacaatgcatggccatgatcacaatgtttcgtctgtagccatc
atgccaaatggtgaccacatagtgtctgcttccagagacaagaccatcaagatgtgggag
gtggctactgggtactgtgtgaagacatttgcaggccacagggagtgggtgaggatggtt
cgtccaaaccaagacggctcattgatcgctagctgttccaacgaccagacggtgcgtgtt
tgggtggttgcttccaaggagtgtaaagctgagttgcgggagcacgagcatgtggtggag
tgtatttcgtgggctcctgacagcgctcacccaaccatcctggatgccacaggcttagag
aataaaaagagtggaaaacccggtccctttcttctctctggctccagagataaaacgatt
aagatgtgggacgtcagcacggggatctgccttatgactctggtgggacatgacaactgg
gtgcgtggggtgctgtttcatcccggaggacgatttgtagtgagctgcgctgatgacaaa
acccttaggatctgggactacaagaacaaacgctgcatgaagactttgtctgcccacgaa
cactttgttacgtctctggatttccataagtctgctccctacgtggtcacaggcagcgtt
gatcagtcagtgaaagtctgggagtgccgctga

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