Nematolebias whitei (Rio pearlfish): 119420510
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Entry
119420510 CDS
T08042
Name
(RefSeq) lissencephaly-1 homolog B
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00565
Ether lipid metabolism
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
119420510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119420510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119420510
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119420510
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119420510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Nup120_160
LisH
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
LisH_PAC1
Beta-prop_SPT8
eIF2A
Beta-prop_DCAF12
Nucleoporin_N
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
Pox_A_type_inc
ARMC9_LisH
DUF7800
SutA-RBD
LisH_2
Motif
Other DBs
NCBI-GeneID:
119420510
NCBI-ProteinID:
XP_037543846
LinkDB
All DBs
Position
14:16825156..16840572
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDINEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEVKEDITYGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
NVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDHTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFAGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPDSAHPTILDATGLE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGICLMTLVGHDNWVRGVLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKSAPYVVTGSVDQSVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcgcagagacaaagagatgaactaaatcgtgctatagctgactatctacgt
tctaatggatatgaggaggcttattccactttcaagaaagaagcagaattagatataaat
gaagaagtagataagaaatatgctgggcttttggaaaagaaatggacctctgttatcaga
ttacagaagaaggtaatggagttggaatcaaagctgaatgaggtgaaggaggacataacg
tacggaggacccgtgggtcagaagagggaccccaaggagtggatcccccgtcccccagag
agatacgccctgagtgggcaccgtgctccagtcacacgggtcatattccatcctgtgttc
aatgtcatggtcacagcctctgaagatgctaccatcaaggtgtgggactatgaagctggg
gactttgagcggaccctcaaaggccacacagactctgtgcaggacatctcgtttgaccac
acagggaagctgctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
gggtttgaatgcatccgaacaatgcatggccatgatcacaatgtttcgtctgtagccatc
atgccaaatggtgaccacatagtgtctgcttccagagacaagaccatcaagatgtgggag
gtggctactgggtactgtgtgaagacatttgcaggccacagggagtgggtgaggatggtt
cgtccaaaccaagacggctcattgatcgctagctgttccaacgaccagacggtgcgtgtt
tgggtggttgcttccaaggagtgtaaagctgagttgcgggagcacgagcatgtggtggag
tgtatttcgtgggctcctgacagcgctcacccaaccatcctggatgccacaggcttagag
aataaaaagagtggaaaacccggtccctttcttctctctggctccagagataaaacgatt
aagatgtgggacgtcagcacggggatctgccttatgactctggtgggacatgacaactgg
gtgcgtggggtgctgtttcatcccggaggacgatttgtagtgagctgcgctgatgacaaa
acccttaggatctgggactacaagaacaaacgctgcatgaagactttgtctgcccacgaa
cactttgttacgtctctggatttccataagtctgctccctacgtggtcacaggcagcgtt
gatcagtcagtgaaagtctgggagtgccgctga
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