Nematolebias whitei (Rio pearlfish): 119420524
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Entry
119420524 CDS
T08042
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119420524 (supt6h)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119420524 (supt6h)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119420524 (supt6h)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119420524 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
Spt6_S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
119420524
NCBI-ProteinID:
XP_037543862
LinkDB
All DBs
Position
14:17256102..17276026
Genome browser
AA seq
1747 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQRFLEEEDEEDDADNPEEQDEHGNLRGLIDDGDD
EGEEEEEEVRKSGSAAGSDSEEEVRHRRKKRRTDDDLDDDDLDLIEENLGVKVKRRKKKY
DRVKTLDDDDDDDEKDLIENEIFDREGEGDLEEGEAVDEPLRHPEDEEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDVDAYDQGEEEEEDQDEES
WDRPKKQTKRRLGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKSAEED
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGSTTNFSRKGPSTIAKIKEALNFMRNQLLE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQAFQFEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELSDVYHHFLLYYGRDIPKMQNTAKANKKKLKKI
KVSEDGEEEELEVEEEEEQKGPDLKLASRRDMYSVCQSVGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPLELAKDYVCSQFQTPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKEIDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEGLLSIDVCI
DLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLNQFLYPQMAKELKS
KLITEAKESIVKSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFAPSRD
TPVFCALINGDGEVVDFIRLPYFMKRRNAFREEERERKAHDIENLKRFLSSKKPHVVAVA
GENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSETDFRDYPPLLR
QAVSVARKIQDPLIEYAQVCSTDDDILCLKLHPLQEHVVKEDLLTALYCEFINRVNEVGV
DVNRAIAHPHTQSLVQYVCGLGPRKGAHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFN
LLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRTRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKID
IEKFNVDLTCRTSDLGDKGNEWKLPKDSYYDFDTEAEDQKHEEELKKKQQRTPYIKRVIA
HPNFHNISFSQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA
FSLGHTLWINTEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGSKEKMEEVLIKSK
REKPTFIPYFISACKELPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAVT
GQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPIATPLMTPSYAFTTPSQ
QTLGTPQYPGSTPQSSHTHALPHMAHHGPHSSLHGPSSGTPSSSTSSRGRTPQQQQQPQP
LPQPKPSSSSSAVDWGKMAEQWLKEKEAEGRKKTQRMTPRPSPSPMIESTPMSLAGDATP
LLDEMDR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgatagcgaagcagaggagtcagaggaggagtttgaagagaaggac
cttaaaccaaagaagacccaaaggtttctagaagaagaagatgaagaagatgacgcggac
aacccagaggagcaggatgaacacggaaatttgcgtggactgatcgatgatggagatgat
gaaggagaggaggaggaagaagaagtgaggaaaagtggaagtgcagcgggaagtgactct
gaagaggaagtgaggcatcgtcgtaaaaagcgcagaactgatgacgacttggatgatgat
gatcttgacctcattgaggaaaacttgggtgtcaaagtgaaaaggagaaagaagaaatac
gatcgtgtaaaaacactggatgatgacgacgacgatgacgagaaggacttgatcgaaaat
gagatctttgacagggagggtgaaggtgacctggaggaaggcgaggctgttgatgagcct
cttcgacatccagaagatgaggaagaaggagaggatgaagagtcagatatagatgatttt
attgtggatgatgatggccaacccatcaccaaaaagagaggcaagaagttctcgggatac
actgatgcagcccttcaggaagctcaggagatttttggtggcgacttcgattttgctgac
tttgatgtggatgcctatgatcagggtgaggaggaggaagaagatcaagatgaagaaagc
tgggatcgacccaaaaaacagactaagaggaggcttgggagaaagagcatctttgagctc
tatgagcccagcgagctggaaagcagtcatatgactgaccaagataatgagatccggtcc
acagacatgcctgagaggttccagttgagatccatccctgttaaatctgctgaggaggat
gagttggaagaagaagcggagtggatcttcagacatgggttctccactctaaccatctcc
atgcaggaaagcacagattatcttgacagaggatcaacaacaaacttcagtaggaagggg
cccagcaccatcgccaagatcaaagaggctctcaacttcatgaggaatcaacttcttgag
gttccattcatagccttctacagaaaagagtacgtggagccagaactaaatatcaacgat
ctgtggaaggtgtggcagtgggatgaaaagtggactcagctgaagaccaggaaacagaac
ctgacccggctgtttcagaagatgcaggccttccagtttgagcagatttctgctgatcct
gacaaacctttggccgatggcattcgtcctttggacacggctgacatggagaggctgaaa
gatgtgcagactctagaagaactgagcgatgtgtatcatcatttcttgctctattatgga
cgagacatccccaagatgcaaaatactgcaaaagccaacaagaagaagctcaagaagatt
aaagtgtcagaagatggtgaagaggaagagcttgaagttgaagaggaggaggagcagaaa
gggcctgacctgaaattggcatctcgtagagacatgtacagcgtctgtcaaagcgtagga
cttgatggcctggctaaaaagtttgggttaactccagaacagtttggagagaatctgagg
gacagttaccaacgtcacgagacagagcagttccctgccgagccactggagctggcaaaa
gattatgtttgcagtcagttccagactcctgaggcagtgctggaaggaaccaggtatatg
gtcgccatgcagattgctcgggaacctctagtcagacacgttcttcgtcagaccttccag
gagagggccaagatcaacatcaaacctacgaagaagggcaaaaaggagatagacgaggct
cactttgcatattccttcaagtatctaaagaataaggctgtaaaagagctgaatggggat
cagtttttgaagatgtgtctggcagaggaggagggccttctttccattgatgtctgtata
gatctaataggtgtcaaaggctatgccggggaccaaacatacttcgatgagatcaagcag
ttctactacagagacgagttcagtcaccaggtccaggagtggaacaggcagcgaacttta
gccatagagagatctctcaatcagtttctttaccctcagatggccaaggagttaaaaagc
aaactgataactgaagctaaagagagcattgttaagtcttgctgtcgccggttgtacaac
tggcttaaggtggctccatacaggccagatcaacaggttgaggaagatgacgacctgatg
gatgagagtcagggaaaaggcatacgagtgctaggtgttgccttcgcacccagcagagac
acgccagttttctgtgctttgatcaatggggatggagaggtggtggacttcattcgtttg
ccttacttcatgaagagaaggaacgcctttagagaagaagaaagagagagaaaggcacat
gacattgaaaatcttaagaggtttctctcgagcaagaaacctcatgtggtcgctgtagct
ggggaaaatcgagatgctcaaatgatcatggaggatataaagaggactatcagtgaactt
gagcaggagtcgtctcttcctgctgtgggagtggaactggttgacaatgaactggccaca
ctttacatgaacagcaagaagtcagagactgattttagggactatcctcccttgctgcga
caggctgtctcagtagccagaaagattcaggatcctctaatagaatatgctcaggtctgc
agcactgatgacgacatactgtgtctcaaactacacccgctgcaggaacatgtagtgaag
gaagatttgctcaccgcactttactgtgaatttatcaaccgtgtcaacgaggtcggtgtt
gacgtgaacagggcgatcgcccatcctcatacccagagtttggtccagtatgtctgtgga
ttggggccgaggaagggtgcccaccttctcaagattctgaagcagaacaacacacgtctg
gaaaacagaacgcagctggtcaccatgtgtcacatgggacccaaagtttttattaactgt
gctggtttcatcaagattgacacagcatctcttggtgacagtacggactcctacatagag
gttctagatggttctcgtgtccaccccgagacgtatgagtgggctcgtaagatggctgtc
gatgccctcgagtatgatgagtctgcagaagatgcaaaccccgccggcgctctggaggag
atcctggaaaatcctgaacgtctcaaagatctggatctggatgcttttgccgaggagctt
gagagacagggttatggcaacaagggaattacactttatgacatccgtgcggagctgagc
tgcaggtacaaagacctcagagttccctacagagtccccaacactgaggaggtcttcaat
ctgctcaccaaggaaactccagaaaccttttacattggtaagctaataaccagtgtggta
actggtatcgctcaccggcggcctcagggagagagctatgaccaggctattcggaacgac
tctacaggtctgtggcagtgtcctttctgccagcaggacaacttccctgagctgagtgag
gtgtggaatcattttgacagcggctcgtgtccaggtcaggccattggagtcaggaccaga
ttagataatggtgtccagggatttattcccaccaagtttctcagtgataaagtggtcaaa
catccagaggagagggtcaaggtgggcatgacggttcactgccgcatcatgaagatcgac
atcgagaagttcaacgtcgacctcacatgccgcacctcagatctgggagacaagggcaac
gagtggaagcttcccaaggacagttactacgactttgacacagaggctgaggaccagaaa
catgaggaggagctgaaaaagaaacagcagcgaactccatacataaagcgtgtgatcgcc
caccccaacttccacaatattagttttagccaggctgagaagatgatggagactctggac
cagggggaccttatcatcaggcccagcagcaaaggagagaaccatctcaccgtcacttgg
aaagtggctgatggcatctatcagcatgtagacgtgagagaagaaggcaaagagaatgcg
ttcagtttaggccacactctctggatcaatactgaagagtttgaggatctggatgaaatc
accgctcggtatattcagccaatggcctcttttgcccgagatctgctcggacataaatac
ttccaggaatgtaacggaggaagcaaagagaaaatggaggaagtattgatcaagtcaaag
agggagaaaccaacattcattccttactttatttcagcgtgcaaggagctgccgggaaag
ttcattttgggctaccagcctcgtgggaaacctcggattgagtatgtgaccatcaccccg
gatggtttccgctaccgttcacagattttccctacagtgaacgggctcttccgttggttt
aaagaccattatcaagagcctgtgccaggcattactccttcgaacagcagccgaacaagg
actcctgcatccctcaatgcaactccagccaatataaatattgcagacttgactcgagct
gtcaacgccctcccacgcaacatgacttcccagatgttcaacgccatcgccgcagtcaca
ggccaaggccagaaccccaacaccacccctgcacagtggggctccagccagtacggctat
ggtggcagcacaggaggagggggagggagctcctctgcttatcatgtatttgccacacct
cagcagcccatagcaacacccttgatgacacccagctacgccttcactacaccaagccaa
cagactctgggcacgccacagtatccaggatccaccccgcagtcttcacacacacatgcc
ctcccacacatggcacatcacggcccccacagcagtcttcatggtccatcatccggaaca
ccctcgtcctctacctcctcccgaggacgaacgccacaacagcagcagcagccgcaacca
ctgccacagccaaagccgagcagcagttcctccgccgtagactggggaaagatggctgag
cagtggctaaaggagaaagaagcagaagggcgaaagaaaacccagaggatgacaccgcga
ccgtcacccagccccatgattgagagcacacccatgtcgcttgctggagatgccacaccc
ctgctggacgaaatggaccgatag
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integrated database retrieval system
