Nematolebias whitei (Rio pearlfish): 119420636
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Entry
119420636 CDS
T08042
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119420636
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
ROBO family
119420636
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_DSCAM-DSCAML_C
Ig_J_second
Enterotoxin_HS1
Motif
Other DBs
NCBI-GeneID:
119420636
NCBI-ProteinID:
XP_037543984
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All DBs
Position
14:complement(34716916..34835920)
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AA seq
952 aa
AA seq
DB search
MSASCPGLYLLLTLLGICSGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPIPT
VEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAIS
HNASLEVAILRDDFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRRDGANLDDRDERI
TIRSGKLMITNTRKSDAGKYICVATNMVGERESETAELTVLERPTFVKRPSSVVLLADES
VEFHCVVQGDPVPTVRWRKDDSDLPKGRFEILEDHTLIVRQVTSSDEGSYTCVSENMVGK
SEASATLTVHVYSVPPAFAIRPRNQAVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFS
YQPPQPFSRLSVSQMGSLTITGVQRSDAGFYICQALNIAGSVITKALLEVTDAGSDHPPP
VIRQGPINQTVPVDSTVVLSCQTAGIPPPTIHWKKDGMVLSPVDSRMSLTETGSLKFHYA
KLGDSGFYTCIASSSSGEAAWTAYLQVEEFGVVVQPSHPKDTNLIPSAPSKPEVSDVSHT
SITLSWKSNPNPSPPPVFYLIEAFSYTLGNRWVTVAEHVKAENFVLTNLKPGAIYLFMVR
AVNAYGLSDPSPISDSIRTHDSSSTLQGVDHRHIQRELGDVVIHLYTPSVLSSSAVRVKW
MVEQQSPYIQGYKVLYRASAEHGQPEAQWSVLEVRALLEDGVVISQLKKGAIYEFKVRPF
FDEFQGADSEVKVVRTLEEAPRRAPQGVTVTKSDANGTAIIVSWKPPYEVEEDGVIQEYK
IWCLGNESRYHVNQSVDGFTFSVLILSLAPGIRYSVEVAASNGAGPGVRSDAAFFQLDST
GQMMDISDKRDTLAQISDVVKQPAFIAGIGATCWLIXHDFQCVALSSPQEEERPQQHLHR
HPQGSIIHLYTHSCISKRRLCVRCWQGCPSQHGRTTEPAVAARKLAQCMCQS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagctgcccgggactttacctcctcctgactctgctagggatttgttcaggg
tctcgtcttcgccaagaagacacccctccccgcattgtggagcacccctcggacctcatt
gtgtccaaaggggagccagccactctcaactgtaaggcagagggccgtccaatcccaacg
gtggaatggtacaaagatggtgagcgcgttgagacagacagagacaacccccgctcccat
cgtatgttgctacccagcggctccctcttttttctgcgtatcatccatggacgacggagc
aagccggatgatggcagctatgtttgtgtggctcgaaactatctgggccaagcaattagt
cacaatgcatccctggaagtagccattttacgtgatgacttcaggcagaacccagttgac
gttatggttgccgttggtgagcctgcagtgctggagtgccagcccccccggggacaccca
gaacccacaatttcctggaggagagatggtgccaacttggatgacagagatgaacgcatt
acaatccggagcggcaagcttatgatcaccaacaccaggaagagcgatgcaggaaaatac
atctgtgttgccacaaacatggtgggagagagggagagcgagactgcggagctcacagtg
ctagagcggccaacctttgtgaagcgtcccagcagtgttgtgctgttggcagatgagagt
gtggagtttcactgtgtggtccaaggagaccctgttcccactgtccgctggaggaaagac
gactctgacctacctaagggcagatttgaaatcctagaggaccacactttgattgttcgc
caagttacctcttcagatgagggctcctatacatgtgtatcagagaacatggtcgggaag
tctgaagcatctgccacgctcactgtgcatgtttattcagtgccccctgcgtttgccatt
cgccccaggaaccaggcggtgtcagtgggcaggacggtcaccttccagtgtgaagccact
ggcaacccgcagcctgctattttctggcagagggaaggcagtgagagtcttctgttctca
taccagccacctcagccctttagtcgcctgtccgtctctcagatgggcagcttgaccatc
acgggtgttcagcgctctgacgctggcttctacatctgccaggctctcaacattgctggc
agtgttatcaccaaagcactgctggaggttacagatgctggatcagaccaccctcctcct
gtcattagacaaggcccaatcaatcagactgttcctgtagacagcacggtggtactgagt
tgccagactgctggcataccaccacccacaatccactggaagaaggatggaatggtgttg
tctcctgtagactctcggatgtccctaacagaaactggatcactgaagttccattatgct
aaacttggagattcaggattctacacatgtatcgcctccagttcaagtggagaagctgca
tggacagcatatttgcaagtagaagaatttggggttgttgtacagccgagtcatcccaaa
gatactaatctgattcccagtgctccatctaaacctgaagtctctgacgtcagccacaca
tcgatcactctgtcttggaaatccaatcctaatcccagtccaccaccagtattttaccta
attgaggcattcagttatactttaggtaacagatgggtgaccgttgcagagcatgtgaag
gcagagaactttgtcttgacaaatctgaaacctggagccatctacctcttcatggtcaga
gcagtgaatgcttacggcctcagcgatccaagtccgatctctgattctatcagaacacat
gacagcagttccaccttgcaaggggtggaccatcgtcacatccagagagagctgggagac
gttgtgattcacctgtacacaccgagtgtgctgtcatcttctgctgtcagagtcaagtgg
atggtagagcagcagtcaccttatatccaaggttacaaggtgctttacagggcgtctgct
gagcatggccagcctgaggcccagtggagtgtcctggaggtgcgtgctctgctggaggac
ggggtggtgatcagtcagctaaagaaaggagcgatttacgagttcaaagtacgacctttc
tttgatgagttccagggagctgacagtgaggtgaaggtggtcaggacgttagaagaagct
cctaggagagcaccccagggtgtcactgtcacaaagagtgatgccaatgggacagctatc
attgtttcctggaaaccaccctacgaggtggaagaggatggagtcattcaggaatacaag
atctggtgtctgggtaacgagagccgctaccatgtgaaccaatcggtggatggtttcacc
ttctccgtgctcattctcagtctggccccaggaattcgctacagcgttgaagtggcagcc
agcaatggtgctggacctggagtcaggagtgatgctgctttcttccagttagactccaca
ggccagatgatggacatcagtgacaaaagagacactttagcacagatctcggatgtggtg
aagcagccggcgtttattgccggcattggcgccacctgctggttgattnctcatgatttt
cagtgtgtggctctatcgtcaccgcaagaagaggagcggcctcagcagcacttacaccgg
catccgcaaggttccatcattcacctttacacccacagttgcatatcaaagaggagactc
tgtgtgcggtgctggcagggctgtccctctcagcatgggcgaaccactgaaccagctgtg
gctgccagaaaattggcccaatgcatgtgccaatcataa
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