Nematolebias whitei (Rio pearlfish): 119420685
Help
Entry
119420685 CDS
T08042
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119420685 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119420685 (zgc:163098)
Spliceosome [BR:
nwh03041
]
Complex A
U2 snRNP components
U2 related factors
119420685 (zgc:163098)
Complex B
119420685 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
CID
cwf21
RRM_1
CTK3
RRM_5
Motif
Other DBs
NCBI-GeneID:
119420685
NCBI-ProteinID:
XP_037544042
LinkDB
All DBs
Position
14:complement(39710565..>39724872)
Genome browser
AA seq
857 aa
AA seq
DB search
MAERKRKPAPSMKPLSKKEQEELKKKEVEKAAEVFEEFVASFGANDERKNKTFVRGGIVN
ATKEEKEAEVKKSKLYQPASKFVPVPQNVPPTLSAESKKSALKKKTEEKKKSNLELFKEE
LKLMQEEREERYKRKKTDPDGKSEGGLDYHDLSPLEQPSLYDDTKWKSSTNLSIKCLSQK
MNEEMLCREFCKYGPLASVKIMWPRSEEERSRISNRAFVAFMTRKDAETAMKALEGKVIM
GLEMKLGWGKPARIPSQPLYTPVRLRVAPPPPSGLPFNAQPRDRLRNTFTKSTTMSKAEL
EKTLNDAVVKVVIPTERRLLVLIHRMVEFVVREGPLFEAMIMKRESNNPYFKFLFDCKRQ
DHVYYRWRLFSILQGDTPTEWRTTYFRMFKGGSLWIPPVLNQYFGRTEIEESTISEEEVK
KGQLRSDHRKKLETLLEELTPSKDRIASAMMFCLDRADAAEEVVEHIANSFSSLQTSFQM
KVSRLYLVSDVLYNSSAKVAGASYYRKFFEVKLPQIFDCLNATHKNIQARLQAEQFKQKI
TNCFRAWDDWAIYPDFYLIQLQNIFLGIAKLDEVKQEEASCELDGVPLASSLIDGLPLDG
STVDDIDGCPMGVDSLDGVPVDDIDGVPLEESSVLSGVPLSKWEKSSDTRTFLQAKTESK
WDTADNQDEDKVNVSCNLQDEDEGSESDSSADSSIAPNYDSAVFQSSLKSFQMTESKRKK
LRELEVKVMKYQDELESGKRQTKSGMSVTQQVTHYRHKLLQKEFLKDEEKNERSKSKDKQ
KDDKRKKERSKKKDDGDKRRTSDPGDRLRKSRSISPLRTKSPKRSKRSRSPCQDQKVDKS
RSRSPHRSHKKAKRSKH
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagaaagagaaaaccagctccttcaatgaaaccactcagcaaaaaagagcaa
gaagagctgaagaaaaaggaagtagagaaagcagcagaggtttttgaagaatttgtggca
tcatttggggccaatgacgaaagaaaaaacaagacttttgtgcgagggggaatcgtgaat
gcaactaaagaggagaaagaagcagaagtcaagaaaagcaagctgtatcaacctgcctca
aagtttgtccccgtacctcaaaatgttccaccaacattgtctgctgagagcaaaaagtct
gcattaaaaaaaaagacagaggaaaagaagaaaagcaatcttgaactcttcaaagaggag
ctcaagctaatgcaagaagagcgcgaggagaggtataaaaggaagaaaaccgatcctgat
ggaaaaagcgaaggaggacttgattatcatgacctttctccactggaacaaccatctttg
tatgacgacacaaagtggaaaagttccactaacctttccattaagtgccttagtcaaaag
atgaatgaagagatgctctgcagagagttttgtaaatacggccccctggccagtgttaag
atcatgtggccccgatcagaggaggagcgcagcagaatttcaaacagagccttcgtggcc
tttatgacgcgaaaagatgctgagactgccatgaaagctcttgagggtaaagtgattatg
ggccttgaaatgaaactgggatggggcaaaccagcccgcattccatctcagcccctgtac
acaccagttaggctgagagtggcacctccgcccccatcaggcctgcctttcaatgctcag
ccgagggatcgcttgcgcaacactttcacaaagtccacgaccatgtctaaagcagagctc
gagaagactctgaacgatgccgtagtcaaagtggttatcccaaccgaaagacgtctgctg
gtccttattcacaggatggtagagtttgtggtgcgtgaaggtcctttgtttgaagccatg
ataatgaagagagagagcaacaatccctatttcaagttcctttttgactgtaaaagacaa
gatcatgtgtactatcgctggagactcttctctatccttcagggagacaccccaactgaa
tggaggacgacatattttcgtatgtttaaaggaggctcactatggataccacccgttcta
aaccaatactttgggagaacagagatagaggaatcaactatctctgaggaggaggtgaaa
aaagggcagctgagatctgaccacagaaagaaactggagacacttctagaggagctgacc
ccaagcaaagaccgcatcgccagtgccatgatgttctgtctggaccgagcagatgctgca
gaagaagtagtggaacacattgctaactctttttcgtcgcttcaaacatcttttcagatg
aaggtttctagattgtaccttgtgtcagatgtcttgtacaattcaagtgccaaagtagcc
ggagcatcatattatcgtaaattttttgaagtaaagttgccacagatatttgattgtctt
aatgcaactcacaaaaacatacaagccaggctgcaggccgaacaatttaagcaaaagatc
acaaattgtttccgagcgtgggacgactgggccatatatccagacttttatctaatccaa
cttcaaaatatctttctgggcatcgccaaactggatgaggtcaaacaagaggaagcatcg
tgtgagcttgatggcgtgccactggccagctcactcatagatggattacctttagatgga
tctaccgtggatgacatagatggctgccccatgggcgtggactccctggatggagttcct
gttgatgacattgatggagtacccctggaagagagcagtgttctctctggagtgccttta
tctaaatgggagaaaagcagcgataccaggacatttcttcaagccaaaactgagtccaag
tgggacacggcagacaatcaagatgaagataaagtgaatgtcagttgcaacctgcaagac
gaagacgagggctctgagagcgacagcagtgccgactcctccatcgcaccaaactatgac
agtgcagtttttcagagctcacttaaaagttttcaaatgactgagagcaaaaggaaaaag
ttgagagaactggaggttaaggttatgaagtaccaagatgagctggaatctggcaaaagg
cagacgaagtctgggatgagcgtcacgcaacaagtgactcattacagacacaaactgcta
cagaaggagtttttaaaagacgaagaaaagaacgagagatccaagtccaaagacaagcag
aaagatgacaagcggaaaaaagaaaggagcaaaaagaaggacgacggcgacaaaagacga
accagcgatcctggagaccggcttcgaaaatcacgaagcatctctcctttaagaacaaag
tctcctaaaaggtctaaacgctccagatcaccatgtcaggaccagaaggtggacaaatcc
aggtcccggtcaccacatcgctcccacaagaaggcaaaaaggagcaaacactga
DBGET
integrated database retrieval system
