Nematolebias whitei (Rio pearlfish): 119420705
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Entry
119420705 CDS
T08042
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119420705 (med13a)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119420705 (med13a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
119420705
NCBI-ProteinID:
XP_037544061
LinkDB
All DBs
Position
14:42906725..43001649
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AA seq
2142 aa
AA seq
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MTSCFVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPFLFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGWRELWLFWWGDEPNFADLIHHELAAEDDGQWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKHEKPINKSEHLSCAFTFFLHGDSNVCTSVEI
NQHQPIYHLTEEHLALAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPRAKEGVSEDKAEDMDWEDDSLASVEVLVGGVRMIYPACLVLVPQSDLPVLAPVGSS
HCTAVYSGGHQVPASQREPAMSLVTLTPPTSPEEAHTVDTHSAQKWVKIPSSSDAFSVDR
TSHHGGKIPRRLATQVVEHVWQECNINRAQNKRKFSAATNGTCEEEVTEKLGAWDFVVPS
QKSYCSCSRHKSVKQRTGSTPGLTQSAGQPPQTPTKHKTGGEKPEKSEKQQKRPQTSFHH
RSLTSDETSIETEATVGQRLSIRGQDGGRFRSTDVAAISKAPQLHSGAISTRPAEQPNSP
QPPPLSPHPCERPEESGEGIKNPSTPNSQHFYQLPSEPCLVGVKGGSEEPGGPECLNQHF
HPHPHSATSAYPEPPEPTVYVGTAIHQEDDGSHTPWRLYNLPRRKDAELPTPLLPGDKLR
DEASAAQDLVSVTELMSSSKGPLKVSEGRVQMYRARRNQYLSAVVTDGDHEPEVDPYDFE
DGEVKFTFSSKKDKAGGEREPGKKHKGEDGDTGLSDESQRAAANNRMTSTSLMHETDLVV
SINDLEHLFNSDEDENGPRRQANGTDENSSYKEQKPSILDPVSCIGSDWPHMFPTPPSLE
QHTMGYSPMNMCSKEYSSMESNLGMTSLDGTSTLGGDFKIEVEESFCSPKPSEIKDYSFV
FKPELCQAFVGCSMFAPLKTLPSQCLPPVKVPEECVYRPIWTVGRELGNPVPVMNFLSKD
SNVPSVGSTMDQEYNQTYTPQTHTPFMSNSAPPSNSAIGILPSPATPRFSAPTPRTPRTP
RTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESV
MNFFKDCNFDSCCICVCNMNIKGADVGVYLSDPVGEAQEPCSCGFSAVVNRRYGNSSGLF
LEDELDIIGRGSDVSREAEKRFEELRLSSLEKYGVGRGDRVPDELILLLQDQCMNPFSPI
SIVETDTATRGPSRAPVPPCVRVEERDYHSDCYMALEHGREFMDNMSGIKVDKALVKSTC
LHPWDKQNAVDVSSLCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGFQGPLTWQQFHKMAG
RGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDIGYLVVCPDN
EALLSGSKSFFRDLSAVYEACRLGQHRPISRGYPDGIVLVGGTAAKTLADQPVSEWFLKA
ASSNDDAFTKLKLYAQVCRHSLAPYLASQTLDGSLLAQPSAPPSSSQTSQQSSSSSSTAS
QQGSSVSNSSSGSGNGSASSNNHTASSCQPGSTVSSGKPNSFPPFGSMGSQSGQLGQQAG
SQNAATSGDNSNSQAQGPTEPPESTLEREKVGVPTDGESHAVMYPPAIVVYIVDPFSYEE
SDGGSGPAPAQSSVWTLGLLRCFLEMLHFLPPHIRNSISVQIVPCQYLLQPVRGEDRQIY
AQHLKSLAFSVFTQCRRPLPTSTNVKSLTGFGPGLAIDTALRSPERPECLRLYTPPFILA
PEKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCIINIDVPNR
ARRKKGSVRRLGLQKLWDWCLGLVQTTSIPWRVVIGRLGRMGHGELKDWNVLLSRGNLQS
LSRRLKEMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTS
QLSTPQDTSCTHILVFPTSAFVQVASSNYTNIDTNIDILNATTDGSDAIGIFELLDQNEL
VDPDIINISPTTSPVHSPGSHYHHGGYCSKGQSTDRMESHEEVQNLLQQPLALGYFVSTA
KAGPLPDWFWSACPQAQNQCPLFLKASLHLHASSLQSDELLHSKHSHPLDSNQTSDVLRF
VLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMNML
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttgttttgtaccgaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacctgacaggaatcaaatggaagaggtttgtgtggcagggtcccacctct
gcccccttcctcttcccggtgaccgaggaagaccccatcctgtgcagcttcagccgctgc
ctgaaagctgacgtgctgagcgtgtggcggcgcagccaacggcagggctggagggagcta
tggctcttctggtggggggacgagccgaacttcgctgacctcatccaccacgagcttgca
gccgaggacgatggtcagtgggagaacggcctttcctacgagtgtcgcactctgctgttc
aaagccatccacaacttgctggagcgctgcctcatgaaccgcagctttgttcgcatcggc
aagtggttcgtcaaaccctacgagaagcacgagaagcccatcaacaagagtgagcacctg
tcctgcgccttcacctttttcttacacggtgatagtaatgtatgcaccagtgtggagatc
aaccagcaccagcccatctaccatctaacagaggagcacctcgctctggcccagcaggcg
tccagcccatttcaagtgatcctgagtccgtttggcttaaatgggacgctaactggccaa
tcattcaagatgtcagatcctcccacacagaaactgattgaggagtggaaccagttttat
cccatcagcccccgtgccaaggagggtgtttctgaagacaaggctgaggacatggactgg
gaggatgactctctggcctctgttgaggtcctcgttggtggtgtgcgaatgatctaccca
gcctgcctggtcctggtacctcagtctgatctccccgtcttggcccctgtggggtcctcc
cactgcactgccgtctactcgggtggccaccaagtgcctgcttcccagcgagagcctgcc
atgtctttggtgaccctcacccctcccacgtcacctgaggaggcgcacacagtggacact
cactcggcccagaagtgggtaaagatcccttcatcgtctgacgcgttcagcgtggacaga
acgagtcaccacggaggaaagattccacgccggctggccactcaggtggtggagcatgtc
tggcaagagtgcaatatcaaccgagcccagaacaagcggaagttttcagctgcgaccaat
ggtacctgtgaggaggaggtgacagagaaattaggagcttgggattttgtggtgccttcg
cagaagtcttactgcagctgttccagacacaaatcagtaaagcaacgaacaggcagcact
ccaggcctgacccagtcagcaggccagcccccccagactccaaccaagcacaaaactgga
ggagaaaagcctgaaaaaagtgaaaagcaacagaagagaccccaaacctctttccatcat
cgcagcctgaccagtgatgaaacctccatcgagacagaagcaacagttggccaaaggctg
tccataaggggtcaggatggaggaaggtttcgctccacagatgtcgctgccatctctaaa
gccccccagctccacagtggagcaatcagcaccaggcctgcagaacagcccaactcccca
caacctccaccacttagcccccacccctgcgagcgtcccgaggagtcaggggagggcatt
aagaacccttcaacccccaacagccaacacttttatcagctaccgtcagagccctgcctg
gtcggggtgaagggtggcagcgaggagcccggaggacccgagtgtctaaatcagcacttc
caccctcaccctcattctgcaacctctgcctaccctgagcctcctgagcccactgtgtat
gtgggcacagccatacaccaggaggatgacggctcccacacaccgtggaggttatacaac
ctgccccgcaggaaagacgctgagctgcccacgccactgctgcctggggacaagctgaga
gacgaggcctctgcagcacaggacctggtgtcagtcacagagctgatgtcgtcatctaaa
gggccactaaaggtgtctgaggggcgtgttcaaatgtatagagccaggaggaaccagtac
ctgtctgctgttgtaaccgatggagatcatgagcctgaagtggacccctatgactttgag
gatggagaggtcaagttcacgttctccagtaaaaaggataaagccggaggagagcgcgag
cccggcaagaaacataagggggaagatggagacactggtctctctgatgaatctcagcgt
gcggctgcaaacaaccgcatgacctccaccagcctgatgcacgagacggatctggtggtt
tccatcaacgacctggaacaccttttcaactcagacgaggatgagaacggccccagacga
caagcgaacggaactgatgagaactcgagctacaaggaacaaaagccatccattttggac
ccagtgtcttgcattggttcagactggcctcatatgtttcccacgcccccctccctggag
cagcacaccatgggctactcacccatgaacatgtgcagcaaggagtacagcagcatggag
tccaacctgggcatgacctccctggacggcacctcaactctgggaggcgacttcaagatc
gaagtggaggagagcttctgcagccccaagccatctgagatcaaggattattcttttgtg
ttcaagccagagctgtgtcaggcgtttgtaggctgctccatgtttgcccctctgaagacg
ctgcccagccagtgtctcccgcccgtcaaagtaccagaggagtgcgtgtaccggcccatc
tggaccgtgggcagggagctggggaacccagtgcctgtgatgaacttcctcagcaaagac
agtaatgtccccagtgtgggcagcaccatggaccaggagtacaaccagacctacacccct
cagacccacactccctttatgtccaacagtgctccacccagcaacagtgccatcggcatc
ctgccctcgcctgccacaccgcgcttttcagcccccaccccacgcacgcctcgcaccccg
cgcacacctcgaggcccctcgagtgttcaaggctcgttaaaatacgagaattctgacctg
tactcaccagcgtccacaccgtccacatgccgacctctgaactctgtagagcccgccaca
gtgccctccatccctgaagcccacagcctctacgtcacgctcatcctctccgagtcagtc
atgaacttcttcaaggactgtaactttgacagctgctgcatctgcgtgtgcaacatgaat
ataaaaggagctgatgtgggcgtgtacctgagcgacccggtcggtgaggcccaggagccg
tgcagctgcggcttcagcgccgtggtcaaccggcgttacgggaatagctcggggctcttc
ttggaggacgagctggacatcatcggccgcggctcggatgtcagcagggaggcagaaaaa
cgcttcgaggagctgcggctctcttcgctcgagaaatatggagttggaagaggggaccgt
gtcccggacgagctgattctgctgctgcaggaccagtgcatgaatccattttcacctatt
tcaatagtggagactgacacggcgacgcgggggccgagcagggcccctgtacccccctgt
gtaagggtggaggagagggactaccacagcgactgctacatggcgctggagcacggcagg
gaattcatggacaacatgtcgggcattaaggtggacaaggcgttggtgaagagcacctgc
ctgcacccctgggacaaacaaaacgccgtggacgtcagctcactgtgctctcaggatgtg
ctgcgggtgctgatgtcgctccagcctgtactgcaggacgccatccagaagaaaaggacg
gtgcggtcgtggggctttcagggtcctctcacctggcagcagttccacaagatggccgga
cgtggctcttacggcacagacgagtctcccgagcccctccccatccccaccttcctggtg
ggttacgagtatgactttgtggttctgtctccatttgggctgccctactgggagaagctg
ctgctggatccgtttggctctcagcgggacattgggtatctagttgtttgtccggacaac
gaagccttgctcagcggctcgaaaagcttcttccgagacctctctgctgtctacgaggcc
tgtcgcctgggacaacaccggcccatttccagaggctaccctgatggcatagtgcttgtt
gggggcactgcagccaagaccctagcagaccagccagtcagtgagtggttcctcaaggct
gccagcagcaacgacgacgccttcaccaagctcaagctctacgcacaagtgtgccgccac
agcctcgcgccatacctcgcatcacagacgttagacggttccctcctcgcacagcccagc
gctcccccctcatccagtcagacgtcacaacagtctagctcctcctccagcacagccagc
cagcagggctcctctgtgtccaacagcagcagcggttctggaaacggctctgcgtcgtcc
aacaaccacacagcctcttcatgccaacctggcagcacagtctcatctggcaagcccaat
tcattccccccctttggaagcatgggaagccagagtgggcagctgggacagcaggctggt
tcccagaatgctgccacctcaggggacaactccaacagccaggcccaggggcccacagag
ccacctgaaagcactttggagcgggagaaggtaggcgtgcccacagacggggagtcccac
gctgtgatgtatccgcccgccatcgttgtttacattgtggaccccttcagctatgaggag
tccgacggaggctcgggccctgctccagcccaatccagtgtgtggacgctgggtttgctc
cgctgtttcctggagatgcttcactttctgcccccacatatccgcaactctatttctgtg
cagattgtcccatgccagtatttgcttcagcctgtacgaggtgaagaccgtcaaatctac
gcacagcacctcaaatctctagcgttctctgtcttcactcagtgccgacggcctctgccc
acctccaccaacgtcaagtctttaactggtttcggcccaggcttggccattgacacggca
ctgaggagccccgagaggccggagtgtcttcgtctgtacacccccccattcatcttagca
ccagaaaaggacaaacaaacggagctgggcgagacgtttggagaggcatcgcagaaatac
aacgtgctgtttgtggggtactgtttatctcacgatcagagatggcttctggctacgtgc
actgacctgtacggggagctactggagacctgcatcatcaacatagacgtacccaacagg
gcgcggaggaaaaaggggtcggttcgtcgactcggcctgcagaagctgtgggattggtgc
ttgggcctggtgcagacgacatcaattccctggagagtggtgattggtcgattaggcagg
atggggcacggagagttaaaagactggaacgttctgttgagccgaggaaacctgcagtcg
ctcagtcggcgtctgaaggaaatgtgtcgaatgtgtggaatctctgcctctgacactccc
agcatcctcagtgtgtgcttggtcgccatggagccgcagggatcctttatcatcatgcca
gactcggtgtcgacaggctccgtgtttggccggagcaccaccttaaacatgcagacctcg
cagctcagcaccccacaggacacctcctgtacccatatcctggtttttcccacctctgcc
ttcgttcaagttgccagctctaattacaccaacatcgacaccaacatcgacattctgaac
gccaccactgatgggtctgatgccatcgggatcttcgaactgctggaccagaacgagtta
gtggacccagacatcatcaacatttcacccaccacctcacccgtacactcccctggctct
cattaccaccacggagggtattgcagtaaggggcagagcacagaccgcatggagtctcac
gaggaggttcaaaacctcctgcagcagcctctggcacttggctactttgtgtctacagcc
aaggctggcccactacctgactggttctggtcggcttgtccacaggctcagaaccagtgt
ccactcttcctcaaggcgtctttgcacctccatgcgtcttcattgcagtcagatgaacta
ctgcatagcaaacactcccaccccctcgactccaatcagacctcagacgtactcagattc
gtactggagcagtacaacgctctctcctggctcacgtgcgacccggcgacgcaggaccgg
cgatcgtgtctgcccatccactttgtggtgctcaaccagatgtacaacttcatcatgaac
atgttgtag
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