Nematolebias whitei (Rio pearlfish): 119420787
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Entry
119420787 CDS
T08042
Symbol
uimc1
Name
(RefSeq) uncharacterized protein uimc1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119420787 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119420787 (uimc1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119420787 (uimc1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
119420787
NCBI-ProteinID:
XP_037544140
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Position
14:complement(4617090..4638289)
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AA seq
985 aa
AA seq
DB search
MALRKQVKHFSSDSQQMDEDTQEDDSATDGDTGDEFSSLLLSSTSTREKRWRKLEKKAIN
KTVGSEMTEEEMMDLALRLSEREASASALQRQQEEEAVMKAIQESMVSQTQPCLNSSSKP
LRADASLGLGSRRKLFYSNGVKMSATDQAVPEDGSTPETDLTSEAKGAGDENIPCKKKRK
RKAGSPLLEMPDLSVSQKVSPDRVEPSSAPLDSPQSSDSTQIDDSQLHMSPVFPLTGCRA
VVHIDRLSQDMVETCRSSGFVLCSQDSWNIEPRSPTFPRSNAESCPKSPVFSGTGQVDNG
QVEPSPAFVRKAQHETSPSCCKRHDCENSEVEFSSQDSLSLSVRSCCSKSPVFPKSSQTT
NILPPSDGLSFHKSLAGEQAEENGEQPVSPVFGTTQAQRRTFTHEQKTPVASELRGSDRE
EKLDGKEETKSDGCQADEFYTRPSTSEQLTQKSKDGSRAETKLLSDMTLAWTDEDEDDNT
LADSASPVFPEEKPLPQGQAASLTHEAAASQGQTSSDCRKQLPTTDEEICPTSKQREEVC
RESPPPGESSGGPTVHYYWGVPFCPGGLDPDTYTQVILAQMEVYQTSLKRAQRCLLRKAE
WGEAVLPEPEKSPSPEAPASSPQLQFPRRRGLRLRGRKINEAAESSPAEEEERMEEEEQQ
QEKEETNEGDEEQMDDDCDVCPETQLSNDDAPELTVFTDAEADISSQPPPKSPESPTVER
ILQHSSPNRDELQEEEEEAMDAKTKENVSSCSGDAGSRTAGEARVKEDSRDPDGQETKSG
RLQRSASLELELAVVPRSPDTSVDCPICQASFPASDIELHAAYCDGEVAIVGEMRPDGHR
FQESVKLPRKRTRRAERTPEGTNDSSDICRKREMCYVCRKAVALREYSRHTELCLQSHSS
RPKGNLLMALAQTENRDSDAGPSGSKVQPEAVIDLRDDDDDDEAASAFRISDSPIRSFTS
ISEATGCLIDFKKQHRPKKPGQRRR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagaaaacaggtgaagcacttctcctccgacagccaacagatggatgaagac
acgcaggaggatgactcagccactgacggagacaccggcgacgagttctcgtctttactt
ctttcatcgacatcaacgagagagaaacgctggaggaagctggaaaagaaagccataaac
aaaactgttggttcggagatgacagaagaggagatgatggacctcgctctgcgtctgagc
gagcgggaagccagcgcctctgcgcttcaacggcagcaggaggaggaggccgtgatgaaa
gccatccaggagagcatggtcagtcagacccaaccgtgtctcaactcctcgagtaaacct
ctgcgcgctgacgcctccctcgggctcggctctcgacggaagctcttctactctaacgga
gtgaagatgtccgccaccgatcaggcagttccggaggacgggagcacgccagagaccgac
ctgacatcagaagcgaaaggagctggagatgaaaacattccctgtaaaaagaaacggaag
agaaaagcaggaagtcctctgctggagatgccggacttgtccgtgagtcagaaggtttcc
cccgacagagtggagccttcctctgctcctctggactctccacagagctccgactcgacc
cagattgacgactcccagctccacatgtccccggtgtttccgttgaccggctgcagggca
gtggtccacatcgaccgactgagccaggatatggtggagacctgccggagctcaggcttc
gtcttgtgctctcaggacagttggaacattgagcccaggagccccacgtttccccggagt
aacgctgaatcctgtcctaaaagtcccgtgttctcagggacaggacaggtggacaatgga
caggtggagccgagtcctgcttttgtcaggaaggctcagcatgagacgtctccaagttgc
tgcaaacgtcacgactgtgaaaactcagaggtcgagttctcctcccaggacagtttatcc
ctctctgtgaggtcctgttgctctaagagcccggtgttccctaaaagttcacaaactacc
aacatcctccccccgtcagacgggctgtcgttccacaagagcctggctggagagcaggcc
gaggagaacggcgagcagcccgtgagtccagtgtttggaacaactcaagcacagcggagg
actttcacccacgagcagaaaacgcctgtggcttcagagctccgaggttctgatcgtgaa
gagaagctcgacggcaaagaggagacaaagtctgatggctgtcaagcagatgagttctac
acccgaccttctacgtcagaacagctgacccaaaagtccaaagacgggagccgtgctgag
accaagctgctgagtgatatgacgttagcctggacagatgaggacgaggacgacaacacg
ctggccgactctgccagtccagtgttcccagaagagaagcctcttcctcagggtcaggct
gcctcgctcacccacgaggctgcagcttctcagggacaaaccagctctgactgcaggaag
cagcttcccaccacagatgaagaaatatgtcccaccagcaagcagcgggaggaggtctgc
agggaatccccccctcctggggagtcatcaggcggtccaacagtccactactactggggg
gttcccttctgccctggaggcctggacccagacacgtacacacaggtgatcctggctcag
atggaggtttaccagacgagcctgaaacgagctcagaggtgtctgctgaggaaggctgag
tggggggaggccgtcctgccggagccagagaaatccccgtcaccggaggcgccagccagt
tctcctcaacttcagtttcctcgaagaaggggcctcaggctgagaggcagaaagataaat
gaagccgctgagtcgtctcctgctgaggaagaggagagaatggaggaagaggagcagcag
caggagaaagaagagacaaacgagggggatgaggaacagatggatgacgactgcgatgtt
tgtccagagacacaactgagcaacgacgacgctccggagcttacggtgttcaccgacgct
gaagcagacatctcttcacagccgccaccaaaaagtcccgagagtcccacggtggagagg
attctgcaacacagttctccaaacagagacgaacttcaggaggaggaggaggaagcaatg
gatgcaaagacgaaggagaacgtctcctcctgcagcggcgatgctggaagtcggactgcg
ggagaagctcgagtgaaggaggacagcagagatccagacgggcaggagacgaagagcgga
cgtcttcaacggtcagcatctcttgagctggaactggccgtcgtcccccgtagccccgac
acctccgtggactgccccatctgtcaggcatcgttccctgcgagcgacatcgagctgcac
gcagcgtactgcgacggggaggtggccatcgtcggcgagatgaggcccgatggccaccgt
ttccaagagtcggtgaagcttccaagaaaaaggacaagaagagcagagcggacacccgaa
ggaacgaacgactcctcagacatctgcaggaaacgggagatgtgttacgtgtgtcgaaaa
gccgttgctctgagagaatacagccgacacacggagctctgcttacaaagccactcttcc
agacccaagggaaatctgctcatggctctggcacaaactgagaacagagattcagatgct
ggcccatctggatctaaagtccagccagaagctgtcatagatctccgtgacgatgacgac
gatgatgaggcagcttcagccttcaggatcagcgactctcccatcaggtccttcacttcc
atctctgaagctactgggtgcctcatcgacttcaaaaaacaacatcgacccaagaagcca
ggccagcggcgaagatga
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