KEGG   Nematolebias whitei (Rio pearlfish): 119420961
Entry
119420961         CDS       T08042                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119420961 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nwh03009]
    119420961 (tbl3)
Ribosome biogenesis [BR:nwh03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    119420961 (tbl3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Utp13 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_SPT8
Other DBs
NCBI-GeneID: 119420961
NCBI-ProteinID: XP_037544273
LinkDB
Position
15:complement(29870169..29884469)
AA seq 914 aa
MAYKNLQFKTNYAVSSKIEPFYKGGKVQISSDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFSLSCDDEILVTASRALLLKQWDWRQAKCTRSWKAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVLKQYCTHNLKGSSGVVHLVQFHPDTSRLQLFSSSLDCGIRVWDLR
SSVCVCILQSHYSAVTSLSFSGDGDTMISSGRDKICTVWDLKTRQAKRTVPVYEAVEGAV
LLPENTDLSQIGVKSKGLHFITAGSKGVLRVWEASTARCVYTQTLPSISTSVSEEDEGND
PRSLIHLFHLPTSSRLAAVTAEHNIFFYRLPELTTLQQFVGYNDEVLDVKFLGKAASHIV
VATNSCQLKVFELLTNSCQILYGHTDTVLTLDVFIKKSMFASSAKDRSVRVWQMDSDSGQ
VRCVAQGSSHTNAVGSISCSRMKASFIVTGSQDCTLKVWDLPEELPASGTEIHQLRPRTT
EKAHDKDVNSVSVSPNDKLLASGSQDCTAKLWSLSGDGNLGLVGVFRGHRRGIWTVCFSP
VDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWT
IKTNECVKTLDAHQDKVWGLHASHKDDKMVTGSADSNITVWEDVTEVELAEEQAKQEDQI
LKQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQGEGSHELLEKTVLKLRVDQR
ESLLRYCVVWNTNARNCQDAQAVLQVLLTHLPPEELLQYQGARAHLEGLIPYTERHMERI
GRLLQASMFLNYMWQKMRVTGASSMTQDDEMDTTPLTQTQFFFDKEKIKESSAERRGDDS
DSGQDEDPHDDEEEEVIEVSATKKASANRKAEGRTNRKQQPESEESSEEEDEELQTMKVK
NLPVSSPPQCQTLS
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcatataaaaatctacaatttaaaacaaattacgctgtgtccagcaagatcgagcca
ttttacaaaggagggaaggtgcagattagcagcgatgagaagtacattttttgcacctgt
ggatcacgtgtcaatgttttggaaatcagcacaggcaagattgtccactgtgtggagcat
gacgatcaagaggacatcacatcattttcacttagctgtgatgacgagatacttgtaaca
gccagcagagctttgctgctaaagcaatgggactggaggcaagccaaatgcactcgctcc
tggaaggccatccacactgttcctgtggccagtatgacctttgactccacctccactctt
ctggcaacaggtggctgtgatgggacaatcaaactttgggatgtgctgaagcagtactgc
actcacaaccttaaaggatcatctggagtggttcacctggttcagtttcacccagatacc
agtcggctgcagctcttctcctcctctctggactgtggtattcgggtatgggacttgcgg
tccagcgtgtgtgtgtgcatcctgcagagccactacagcgctgtcacgtccctcagcttc
agcggtgacggtgacaccatgatcagttctggtagagacaaaatctgtacagtgtgggac
cttaaaacccggcaagcaaagagaactgttccagtttatgaggctgtggagggagccgtg
cttctgcctgagaatacagacttatctcagattggagtgaaaagcaaaggtttacatttc
atcacagctggcagcaaaggtgtgctgagagtgtgggaggccagcactgcacgctgtgtt
tacacccagacccttccatctatctccacttctgtctctgaggaagatgaggggaacgat
cctcgcagtctgatacaccttttccacctgcccacctcgtccaggctggccgcagtcact
gcagaacacaacatattcttctaccggctgcctgaactcaccacgctgcaacaatttgtg
ggttacaatgatgaggtgttggacgtgaagttcctgggtaaagctgccagtcacattgtg
gtggccaccaacagctgccagctgaaagtgtttgagctgctcaccaacagctgccagatc
ctctacggacacacagatactgtcctcacactggacgtgttcataaaaaagtccatgttt
gcgagcagtgcaaaggaccggtcagtgcgtgtatggcagatggacagtgacagcggtcag
gtgcgatgtgtggctcagggctccagccacaccaatgctgtgggctccatcagctgctcc
aggatgaaagcgtctttcattgtgactggcagtcaggactgtaccctgaaggtgtgggat
ctacctgaagaacttcctgcatcagggacagaaatccaccagctaagaccccgaaccaca
gagaaggctcacgataaggatgtaaacagtgtctccgtgtctcctaacgacaagctgctg
gcctcggggtcccaggactgcacagccaagctgtggtctctgtctggggatggaaatttg
ggtctcgtgggggtgtttcggggccaccgtcgtgggatttggaccgtctgcttctctccc
gttgatcaggttctggccacgtcttccgcagacgggacaacaaagctgtggagcctgcag
gacttcagctgtctgaagacgttcgagggccacgatgcttcggttcttaaagtcatcttt
gtgagccgcggcacgcagctgctgaccagcggctcagacggtttagtgaagctgtggacc
ataaagaccaacgagtgcgtgaagacgctggacgcccaccaggacaaagtgtgggggctc
cacgccagccacaaagatgacaagatggtgacgggctctgcagactctaacatcaccgtg
tgggaggatgtgaccgaggtggagctggcggaggagcaggccaagcaggaagatcagata
ctcaagcagcaggagttgtccaacctgctccatgagaagaaatatctgaaggccctgggt
ctcgccatctcactggaccagcctcacaccgtgctgaccgttatcaaagcgattcgtcag
ggtgagggaagccacgagctgctggaaaagacggtgctgaaactgcgagtcgatcagaga
gagtcgctgctgcgctactgcgtggtgtggaacaccaacgccaggaactgtcaggacgct
caggccgtcctccaggtgctcctcactcacctgccgcccgaggagcttcttcagtaccag
ggagcccgagcccacctggagggtctgatcccgtacacagaaagacacatggagaggatc
ggccgtctgctgcaggcgtccatgttcctcaactacatgtggcagaaaatgagagtaact
ggagcatcgagcatgacccaagatgatgaaatggatacgactcctctgacacagacccag
ttcttttttgataaagagaaaataaaggagagtagcgctgagagacgaggtgacgacagc
gacagcgggcaagacgaagatccacatgatgatgaagaagaagaggtgattgaagtcagc
gccacaaaaaaggcctctgctaacaggaaagctgaaggcagaaccaacaggaagcagcag
ccagagagcgaggaaagctctgaggaggaagacgaggagcttcaaacaatgaaagtgaag
aacctcccagtttcttctcctccacagtgtcagactctgagctga

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