Nematolebias whitei (Rio pearlfish): 119420961
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Entry
119420961 CDS
T08042
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119420961 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119420961 (tbl3)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119420961 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
119420961
NCBI-ProteinID:
XP_037544273
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All DBs
Position
15:complement(29870169..29884469)
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AA seq
914 aa
AA seq
DB search
MAYKNLQFKTNYAVSSKIEPFYKGGKVQISSDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFSLSCDDEILVTASRALLLKQWDWRQAKCTRSWKAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVLKQYCTHNLKGSSGVVHLVQFHPDTSRLQLFSSSLDCGIRVWDLR
SSVCVCILQSHYSAVTSLSFSGDGDTMISSGRDKICTVWDLKTRQAKRTVPVYEAVEGAV
LLPENTDLSQIGVKSKGLHFITAGSKGVLRVWEASTARCVYTQTLPSISTSVSEEDEGND
PRSLIHLFHLPTSSRLAAVTAEHNIFFYRLPELTTLQQFVGYNDEVLDVKFLGKAASHIV
VATNSCQLKVFELLTNSCQILYGHTDTVLTLDVFIKKSMFASSAKDRSVRVWQMDSDSGQ
VRCVAQGSSHTNAVGSISCSRMKASFIVTGSQDCTLKVWDLPEELPASGTEIHQLRPRTT
EKAHDKDVNSVSVSPNDKLLASGSQDCTAKLWSLSGDGNLGLVGVFRGHRRGIWTVCFSP
VDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWT
IKTNECVKTLDAHQDKVWGLHASHKDDKMVTGSADSNITVWEDVTEVELAEEQAKQEDQI
LKQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQGEGSHELLEKTVLKLRVDQR
ESLLRYCVVWNTNARNCQDAQAVLQVLLTHLPPEELLQYQGARAHLEGLIPYTERHMERI
GRLLQASMFLNYMWQKMRVTGASSMTQDDEMDTTPLTQTQFFFDKEKIKESSAERRGDDS
DSGQDEDPHDDEEEEVIEVSATKKASANRKAEGRTNRKQQPESEESSEEEDEELQTMKVK
NLPVSSPPQCQTLS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcatataaaaatctacaatttaaaacaaattacgctgtgtccagcaagatcgagcca
ttttacaaaggagggaaggtgcagattagcagcgatgagaagtacattttttgcacctgt
ggatcacgtgtcaatgttttggaaatcagcacaggcaagattgtccactgtgtggagcat
gacgatcaagaggacatcacatcattttcacttagctgtgatgacgagatacttgtaaca
gccagcagagctttgctgctaaagcaatgggactggaggcaagccaaatgcactcgctcc
tggaaggccatccacactgttcctgtggccagtatgacctttgactccacctccactctt
ctggcaacaggtggctgtgatgggacaatcaaactttgggatgtgctgaagcagtactgc
actcacaaccttaaaggatcatctggagtggttcacctggttcagtttcacccagatacc
agtcggctgcagctcttctcctcctctctggactgtggtattcgggtatgggacttgcgg
tccagcgtgtgtgtgtgcatcctgcagagccactacagcgctgtcacgtccctcagcttc
agcggtgacggtgacaccatgatcagttctggtagagacaaaatctgtacagtgtgggac
cttaaaacccggcaagcaaagagaactgttccagtttatgaggctgtggagggagccgtg
cttctgcctgagaatacagacttatctcagattggagtgaaaagcaaaggtttacatttc
atcacagctggcagcaaaggtgtgctgagagtgtgggaggccagcactgcacgctgtgtt
tacacccagacccttccatctatctccacttctgtctctgaggaagatgaggggaacgat
cctcgcagtctgatacaccttttccacctgcccacctcgtccaggctggccgcagtcact
gcagaacacaacatattcttctaccggctgcctgaactcaccacgctgcaacaatttgtg
ggttacaatgatgaggtgttggacgtgaagttcctgggtaaagctgccagtcacattgtg
gtggccaccaacagctgccagctgaaagtgtttgagctgctcaccaacagctgccagatc
ctctacggacacacagatactgtcctcacactggacgtgttcataaaaaagtccatgttt
gcgagcagtgcaaaggaccggtcagtgcgtgtatggcagatggacagtgacagcggtcag
gtgcgatgtgtggctcagggctccagccacaccaatgctgtgggctccatcagctgctcc
aggatgaaagcgtctttcattgtgactggcagtcaggactgtaccctgaaggtgtgggat
ctacctgaagaacttcctgcatcagggacagaaatccaccagctaagaccccgaaccaca
gagaaggctcacgataaggatgtaaacagtgtctccgtgtctcctaacgacaagctgctg
gcctcggggtcccaggactgcacagccaagctgtggtctctgtctggggatggaaatttg
ggtctcgtgggggtgtttcggggccaccgtcgtgggatttggaccgtctgcttctctccc
gttgatcaggttctggccacgtcttccgcagacgggacaacaaagctgtggagcctgcag
gacttcagctgtctgaagacgttcgagggccacgatgcttcggttcttaaagtcatcttt
gtgagccgcggcacgcagctgctgaccagcggctcagacggtttagtgaagctgtggacc
ataaagaccaacgagtgcgtgaagacgctggacgcccaccaggacaaagtgtgggggctc
cacgccagccacaaagatgacaagatggtgacgggctctgcagactctaacatcaccgtg
tgggaggatgtgaccgaggtggagctggcggaggagcaggccaagcaggaagatcagata
ctcaagcagcaggagttgtccaacctgctccatgagaagaaatatctgaaggccctgggt
ctcgccatctcactggaccagcctcacaccgtgctgaccgttatcaaagcgattcgtcag
ggtgagggaagccacgagctgctggaaaagacggtgctgaaactgcgagtcgatcagaga
gagtcgctgctgcgctactgcgtggtgtggaacaccaacgccaggaactgtcaggacgct
caggccgtcctccaggtgctcctcactcacctgccgcccgaggagcttcttcagtaccag
ggagcccgagcccacctggagggtctgatcccgtacacagaaagacacatggagaggatc
ggccgtctgctgcaggcgtccatgttcctcaactacatgtggcagaaaatgagagtaact
ggagcatcgagcatgacccaagatgatgaaatggatacgactcctctgacacagacccag
ttcttttttgataaagagaaaataaaggagagtagcgctgagagacgaggtgacgacagc
gacagcgggcaagacgaagatccacatgatgatgaagaagaagaggtgattgaagtcagc
gccacaaaaaaggcctctgctaacaggaaagctgaaggcagaaccaacaggaagcagcag
ccagagagcgaggaaagctctgaggaggaagacgaggagcttcaaacaatgaaagtgaag
aacctcccagtttcttctcctccacagtgtcagactctgagctga
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