Nematolebias whitei (Rio pearlfish): 119421011
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Entry
119421011 CDS
T08042
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119421011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119421011
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Serotonin (5-HT3)
119421011
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119421011
NCBI-ProteinID:
XP_037544328
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Position
15:complement(33583181..33587831)
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AA seq
415 aa
AA seq
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MTKLAFLLGILFIGSVHAESICTDRRCLAQMLINKEHFSQPQYENCTLLIKVPFIEYQTL
DVDTKNLRLNSRLVASIEWLDPGLAWDTSVYQFDQVILPVNTIWTPELHVTNGITTDMQQ
GSDDLVVFSNGTVKHSVIINAAVDCEINLFNYPFAEDECPVAIQSFSAGDCGTSLHMGDV
KMIDGSHGDWQTDFAILKKQRDDRNYIMVGLSIKYSNPFITLLLPTILIVLADIVSFALP
LKGGERNSFKITLVLSFTMFLSILNDELPGDGQCSPIIRTHFCVCLVLLVLSMLVSMLLT
RVAKDGLFDLCSFFQSSPQREKENSKEIKDEETRADISVVQLEVSEDTLMLRKMVKFLEA
LQTNRQTETEYERIADRGDKIFSCFYFIVASSYVTAMTCVMVKYKCKVNHFDFWY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaactagccttcttactggggatactttttataggaagtgtccacgcagaatct
atctgcacagatcgcagatgtctggctcaaatgttaatcaacaaagagcacttttctcag
cctcagtatgaaaactgcaccctgctcattaaggtgccgttcattgagtaccaaactctg
gatgttgacacaaagaacctccgtctcaatagtcgtcttgttgcttccattgaatggctg
gatccaggattggcgtgggacacgtcagtttaccagtttgatcaagtgattttgccggta
aatacaatctggaccccagagctccatgtaacaaatggaataacaacagatatgcagcaa
ggctctgatgatctggtggtattcagtaatggtacagtgaaacacagtgtgatcataaat
gcagcggtggactgcgaaatcaatctgttcaactaccccttcgctgaggatgaatgtcct
gttgcaatccaaagtttttcagcgggtgattgtggtacaagtctacacatgggtgacgtg
aagatgatagatggttcccacggagattggcaaacagattttgcgattctcaagaaacaa
agagatgaccgcaattacatcatggtgggactgagcatcaaatattcaaaccccttcata
acattattgctgcccacgattctgatcgttttagccgatatagtcagctttgctctgccg
ctgaaaggaggcgaacgcaactcgttcaagatcactctggtgctcagctttaccatgttc
ctgagcatcctcaacgacgagctccccggagacggccagtgcagccccatcatccgaact
cacttctgtgtttgcctggttcttctggtgctgagcatgctggtgtccatgctgctgaca
cgggtggccaaagatgggttgttcgatttgtgcagcttcttccaaagttctccccaacga
gagaaagaaaacagcaaagagatcaaggatgaagagaccagagctgacatcagtgtcgtc
cagctggaggtttctgaggacacgctaatgctcagaaagatggtcaagttcctggaagct
cttcagaccaacaggcagacggaaacagagtacgagaggattgcagacagaggggataag
atcttttcctgcttctatttcatcgttgcctcgtcatacgttactgcaatgacttgtgtt
atggtgaagtataaatgcaaagtgaatcactttgatttctggtactga
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