Nematolebias whitei (Rio pearlfish): 119421106
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Entry
119421106 CDS
T08042
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119421106
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119421106
04082 Neuroactive ligand signaling
119421106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119421106
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119421106
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
119421106
NCBI-ProteinID:
XP_037544430
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Position
15:22658877..22748614
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AA seq
1363 aa
AA seq
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MGERMPEEMDDHSMFFQFGPSIEQQASVILNIMEEYDWYIFSIVTTYYPGYQDFVTRRGL
LSVSYDEWDYGIEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPEKKTPISGNPNE
VLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKDRQWDRVGKWENGSLSMKYHVWPRH
ELYGGAASKEDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKSVNQTKESGIY
IKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVRKPFSADVWVM
MFVMLLLVSAVAVFVFEYFSPVGYNRCLADGKEPHGPSFTIGKAIWLLWGLVFNNSVPVQ
NPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPF
RFGTVPNGSTERNIRNNYPEMHSYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAG
RDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGIC
HHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGRPGFV
FTVSRGIYSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHS
ALDFIRRESSVYDISEHRRSLAGHSDCKPPYMPEDNMFSDYISEVERTFGNIHMKDSNLY
QDHYLHHHGSTLGLSGPPPNRPHSLGSGSSLEGGMFDCDSLGGGVAPIFTTQPCSALTHR
NMSKFDLLSGQTPPSGQSFKGGLPDLYGKFSFKGGSSTYIPGQSYCAGRGEEDGNIRSDV
SDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYH
SQRSASPPLLPSERKRGGGGGGGGNNNGNSYLFREKESVRDFYLDQFRPKEGVPQWEHVD
LTEGPVGRDGAVSTCTSLVPVDDFLKSKPKKSDSKSGGGSGLAGGEWECRNCRASVVGGG
KQMSIHGGGGYAGGMSCGSSGGGGNSRPSSATCMRCDGCKKTGNLYDISEDNNHSLEHMG
GGNGGVVGGIAPGPQTQSQVQQRRKSGGLGKQLRRQHSYDTFVDLQKEESGMGSLMGGLG
GGGGMSGPGLGGMLPPPRSISLKEKERYMEGNSPFAHIFERHGGSERERERDRDPLFYGG
ESQKGPGSPFGLFRGGEGLHRRSIGERDMRDRSLMEGGGGAAFSLSKSLYPDRVNHNPFI
PTFGDDQCLMHGAKQYYMTKQQQQQQIATNSRSDFRSQMSAGSYLPASATAGVMSSVSPR
FSKELSLGGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaggatgccagaggaaatggacgaccactccatgttctttcaatttggcccc
tccatcgagcagcaggcttctgtcatcctgaacattatggaggagtatgactggtacatc
ttctccatcgtcaccacgtattacccgggttaccaggacttcgtcacaaggagaggtctg
ctctctgtgtcctatgatgagtgggactacggcatagaagctcgtgttcgggacggcgtg
gccatcatcaccatggcaacttccaccatgatgatggaccgcgggcctcacactctgctg
aagtctgagtgccacggagcaccggagaagaagacccccatctcaggcaaccccaacgaa
gttctcaggtacctgatgaatgtaacgtttgagggacgtaatctgtcgttcagcgaggat
ggctaccagatgcaccccaaacttgttatcattctgctcaacaaggacaggcagtgggac
agggtgggtaagtgggagaatggttccttgtccatgaaataccatgtgtggcctcgccat
gagctgtatgggggggcagcaagcaaggaagatgaccacctgtccatcgtgacattggag
gaggctccgttcgtcatcgtggaagacgtggatccgctcagcggcacctgcatgaggaac
actgtaccctgtcggaaacaaatcaaatcagtcaatcagacgaaggagtcggggatctac
atcaagcgctgctgtaagggcttctgcatcgacatcttgaagaagatcgccaagtcagtc
aaatttacgtatgacctttatctggtcactaatggaaagcatggcaagaaaatcaatgga
acctggaacggcatggtgggagaggtgaggaagcccttcagcgcagatgtgtgggtgatg
atgttcgtcatgctgctgctggtgtcagcagtggctgtgtttgtgtttgagtacttcagc
cctgtgggctacaaccgctgtctggctgacggcaaagagcctcacggtccatcgttcacc
atcggtaaggccatctggctgctgtggggtttggttttcaacaactctgtgcccgttcag
aaccccaaaggcaccaccagtaagatcatggtgtcagtgtgggccttcttcgctgtcatt
ttcctggcctcttacactgccaacctggctgctttcatgatccaggaggaatacgtggac
caggtgactggtctctcggacaaaaagttccaaagccccaatgatttttcacctccgttc
cggtttggcacggtccccaacggaagcactgagagaaatattcggaacaactatccagaa
atgcactcctacatgaccaagttccatcagaggaacgtcaacgaagctctgcagagtctg
aaggccggcaaattagatgctttcatctatgacgctgccgtactgaactacatggccggc
agggacgagggctgtaagctggtgaccatcggcagcggctacatctttgccaccacgggg
tacggcatcgccattcagaaggagtcgctctggaagagacacgtggacctggccatcctg
cagctctttggagacggtgagatggaggagctggagtccctgtggctgacgggaatctgc
caccacgagaagaacgaggtgatgtccagccagctggacgtggacaacatggccggcgtc
ttctacatgctgggcgccgccatggctctgtccctcatcacgttcatctgcgaacactgg
ttctactggcagctgcgcttctgcttcatgggcgtctgctctgggcggcccggttttgtc
ttcaccgtcagcagggggatatacagctgcattcatggggtgcagatcgaagagaagagc
agctctgcattgaattccccatcagccaccatgaacaacacccattccaacataatgcgc
ctcttacgcaccgccaagaacatggcctccctgtcgggggtgaacggctcacctcacagc
gctctggacttcattcgccgagaatcttctgtttacgatatctccgagcaccgtcgcagc
ttggcaggccactcagactgcaaacctccatacatgccagaggataacatgttcagcgac
tacatcagtgaggtggaaaggacgttcggcaacattcatatgaaggacagtaatctgtac
caggaccactacctacaccaccacggctcaaccctaggactcagtgggcctcctcccaac
aggccccacagtttgggcagtggtagttccctggaggggggcatgtttgattgtgacagc
cttggtggcggagttgcgccaatctttaccacccaaccctgctcagcactgacgcacagg
aacatgagcaagtttgacctgttgtccggacagacgcctccttcgggccaaagcttcaag
ggaggtctcccagacttatacgggaagttttccttcaagggaggaagctccacctacatc
cctggacaaagttactgtgcaggaagaggagaggaagatgggaacatacgttcagatgtc
tcagatatttccacacacacggtaacctatggaaacctggagggtaatgccaagaagcgc
aaacagtatcgagacagcttgaaaaagaggccagcctctgcaaagtccagacgggagctg
gacgagattgagctgggctacaggagaaaaccctaccacatcagccaccaccactaccac
agccaacgctctgcctccccacctcttctaccctctgaacgcaagagaggcggtggaggg
ggtggaggaggaaacaataacgggaactcgtatcttttcagagaaaaggagagtgttagg
gacttttatttggaccagtttcggcctaaagagggcgtccctcagtgggaacatgtggac
ttgacagaaggtccagtaggcagagatggggcagtatctacctgcacctccttggtacct
gtggatgactttcttaagagtaagcccaagaagtctgattcaaagagtgggggaggatct
gggctggcagggggagagtgggagtgcagaaactgtcgggctagtgtggtaggtgggggc
aaacagatgtccattcatggaggtggtggctatgctggtggtatgagctgtgggtcctca
ggaggtggagggaacagccggcccagctccgcaacctgcatgcgctgcgatgggtgtaaa
aagacaggaaatttgtacgatatcagtgaggacaacaaccactccttggaacatatgggg
ggagggaatggaggagtggtaggtggaattgccccaggcccccaaactcaatctcaggtc
cagcagaggagaaagagcggaggattggggaagcagctgaggcggcagcattcatatgac
acatttgttgaccttcaaaaagaggaatcagggatgggaagtttgatgggaggtttggga
ggaggtggagggatgagtggtcctggtttgggaggaatgctgcccccaccaaggagtatt
agcttgaaggagaaagaacgctacatggaaggtaacagcccctttgcacacatatttgag
cgccatgggggctcagagagggaaagagaacgggacagagacccgttgttttatggaggt
gagagccagaaaggacctggctcaccatttggtctgttcagaggtggtgagggcctccat
cgccgctccatcggagaacgagacatgagagacagatctttgatggaaggaggaggtggg
gcagcattctctttatccaaatctctttaccctgacagggtaaaccacaacccctttatt
cccacctttggtgatgaccagtgtttgatgcatggagccaaacaatattacatgacaaaa
caacagcagcagcaacaaattgccacaaacagccgaagtgacttcaggagtcagatgagt
gcgggatcatatctgccagcgtctgccacagccggggtgatgtccagtgtgtccccccgg
ttctcgaaagaactcagtcttggtggaatgaaccatcatggctcaatgctaggggttggc
cccccacgtcccttcaatggaagcaatggccatgtgtatgaaaaactctccagtatcgag
tctgacgtgtaa
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