Nematolebias whitei (Rio pearlfish): 119421170
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Entry
119421170 CDS
T08042
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119421170
03037 Cilium and associated proteins [BR:
nwh03037
]
119421170
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119421170
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119421170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119421170
NCBI-ProteinID:
XP_037544485
LinkDB
All DBs
Position
15:complement(33042380..33055690)
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AA seq
794 aa
AA seq
DB search
MACSGSYSVNVCNSDHEYVSIYFLVESGSWLEGSFRLFSKSKGPGQRCSPETIELGVFRE
CSGIKCKSVFLTGSESTNSSQTLEEVPIRRKSSSLQRHDWSAATVKVLSSMPSRKAGFHS
SARVRTRRSSRLQQHQNKINDFINESDSVLTASTDSADNVLGSGFCGDEDGKDPLVSSLQ
GLSVSDGLRKLRGTPLRLADKKEIRREAFSPAAERKLIRRSIPFCSRACVCISKAWRQCA
FSSLSLKLWQSPLKRLSERYGSGVLSYFLFLRTLLFLNLLLFVITGLFLVSPQAFHPPPH
NSQPSSFSGLDLLTGTGYLSQSLMFYGYYSHVTIKTCIDLRSCSTDESHTMLYSIPAAYF
LTIAVAFFIICIILVYSLSRSFGKSFHVLKSNMNLSEKVFCSWDFKVSKKSAVRLQSEKI
SIQLKEQLSELISGEEQKSCMHRFYCLIIRVIAWVICLTSIFLSTMVVYFLSEYSEKQGL
QDVGLLLMSAVVSGFNLLLPGIFNLSAWMENFTSPGTCVYVSIFRNLLSKISIVGVLCYY
WQDKVAVEPESRPLQCWENFVGQELYRLLLMDFIFTMIYTILGEFLWRLFSKKILLRNRK
PVFDIARNVLELIYGQTLTWLGMLFAPLLPAVQIVKLIVLFYMKKSSLIVNCQVSKKPWR
ATQMTTLFITLLCFPSFLGATVAVGYTVWMIKPSSTCGPFRNLTSMFQAGSLWANKLKNS
HLVLAWLIWAYDSLTQNPLFLFLPTGVFLLVIYFHVQVVDGQTKIISWLEKQVENEGMDK
KFLIVQLQYLHEQG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagtgggagctacagtgtcaacgtctgcaattctgaccatgagtacgtttcc
atctatttcctagtcgaatcaggttcatggctagagggttctttcagactcttctccaag
tccaaaggtcctggccaaaggtgttctcctgaaaccatcgagctcggagtgtttagggaa
tgctcgggtataaaatgtaaatctgtgttcctcacaggcagcgagtcaacaaacagcagc
caaacgctggaagaagtgcccatcagaaggaagagcagctcgttgcagagacacgactgg
tcagctgccacagtcaaagtcctctcctcgatgcctagtcgtaaagccgggttccatagc
tctgcacgtgtaagaaccagacgatcatcccggctacagcaacaccagaacaaaataaac
gattttatcaacgagagcgattctgtgttgacagcgtccacagactcggcggataatgtg
ctcggttctggcttttgcggtgatgaagacggtaaggatccgttggtgtcaagcctgcag
ggcctctctgtcagtgacggcctgcggaagctgcgaggcacgccgcttcgcctggcagac
aagaaggagatcagacgagaggctttcagtcctgcagctgaacggaaactgatcaggcgc
agcatcccgttctgcagccgtgcatgtgtgtgcatctcaaaggcgtggcgtcagtgtgcg
ttcagcagcctctccctcaagctgtggcagtcgcccctgaaaaggctgagcgagcgttat
gggtccggagtgctctcctacttccttttcctccgaacactcctgttccttaacctcctt
ctttttgtcatcaccggccttttcctggtcagtcctcaagccttccaccctcctcctcat
aactcacagcccagttcattctctggcctcgaccttctcaccggcacgggttacctttct
cagagcttgatgttttacggttactactcgcacgtcaccattaaaacctgcatcgacctg
cgttcctgcagcacagatgagtcgcacacgatgctttacagcatcccagcagcgtatttc
ctcactattgccgttgccttcttcattatctgcatcatcctggtgtacagcttgtcgagg
tccttcgggaaaagtttccatgtccttaagtccaacatgaatttgtctgaaaaggttttc
tgctcgtgggatttcaaagtcagcaagaagtcagctgtcagactccagtcagagaaaatc
agcatccagctcaaagagcagctgtcggagttgatcagcggagaagaacagaagagctgc
atgcatcgattctactgcctcatcatccgtgttattgcatgggtcatatgtctgacgagc
atcttcctcagcaccatggttgtctacttcttgtctgagtactcagagaagcagggtctc
caagatgtcggactgttgctcatgtctgcggtggtctctggcttcaacctgttacttcct
ggcattttcaacttgtctgcttggatggagaattttacctcacctggtacatgtgtgtat
gtctccatcttcaggaacttgttatcaaagatcagcattgtgggggttttgtgttactac
tggcaggacaaagttgcggtggaaccagaaagtcgacctttgcagtgctgggagaatttt
gtggggcaagaactttatcgtctgctcctgatggacttcattttcacgatgatttacacc
attttgggggaatttctctggaggctgttctctaagaaaatcctattgaggaacaggaaa
ccagtgtttgacattgctcgaaacgtgctggagctcatttatggacaaactctaacttgg
cttggtatgctgtttgcgccgctgctccctgcggtccaaattgtaaagctgattgtgttg
ttttacatgaagaagagcagtctgatcgtcaactgtcaggtctccaaaaagccctggagg
gccactcagatgacaacattgttcattacacttttatgcttcccctcatttcttggagca
accgtggcagttgggtataccgtttggatgattaaaccctcatcaacatgtggccccttt
aggaacctaaccagcatgtttcaggcaggatccctgtgggccaacaagctgaagaactct
cacctggttctggcctggctcatctgggcctatgactctctgacacagaatcctctcttc
ttatttctgcccactggtgtctttctactggtgatatattttcacgttcaggtagttgac
ggccaaacaaaaatcatcagctggttagaaaagcaagttgaaaatgaaggaatggataaa
aagttcctcattgtgcaactccaataccttcatgagcagggttag
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