KEGG   Nematolebias whitei (Rio pearlfish): 119421194
Entry
119421194         CDS       T08042                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119421194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nwh03041]
    119421194
Spliceosome [BR:nwh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119421194
 Complex B
    119421194
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 119421194
NCBI-ProteinID: XP_037544505
LinkDB
Position
15:complement(37438512..37452140)
AA seq 450 aa
MSDFEEFEKQLTENRQERERERHRKRSHSDSPEAGDKHRSRDRKSRDRRSSSRDHKKHSH
SPRRTRKKRICKYWDVPPPGFEHITPAQYKAMQAAGQIPAVALLPSASSTGAAAAPTPVS
IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQTPSNPVLAVQINQDKNFA
FLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVPGVVSTVVPDSP
HKLFIGGLPNYLNDDQVKELLMSFGSLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVV
GLNGMQLGDKKLIVQRASVGAKGANLTSIIETPVTLQIPGLQRLQNSGMPTEVLCLLNMV
MPDELVDDEDYEEILEDIRDECCKYGNVLSIEIPRPLEGVEVPGCGKIFVEYVSAADCQK
AMQALTGRKFANRVVVTKYYDPDMYHRHAF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtcagactttgaggagtttgagaagcagctgacggagaaccgacaagagcgagaacga
gagaggcacagaaagcgaagtcacagcgactctcccgaggcgggcgacaagcatcgcagc
cgggaccgcaagagccgggaccgccgcagctcctcccgggaccacaagaagcacagccac
tccccgaggcgaacgaggaagaaaaggatttgtaaatactgggatgttcctcctccgggc
ttcgagcacatcacacccgcacaatacaaagctatgcaagctgctggtcagataccagcc
gtggctctgctgccttcagcctccagcaccggagcggctgcggcgccgacacccgtttcc
atcgtcggcagccagatgacccgacaggcccgtcgcctttatgttggaaacatcccgttt
ggagtcaccgaggagtccatggcagagttcttcaacgctcagatgcgtctggccggcctc
tctcagactcccagtaatccagtcctcgcggttcagattaatcaggacaaaaactttgcc
ttcttggagtttcggtcggtggacgagacgacgcaggctatggccttcgatgggatcatc
ttccagggtcagtcgctgaagatcagacgacctcacgactaccggcctttaccgggtatc
tcagagcagccggctttccacgtcccaggggttgtctccaccgttgttcctgattcccct
cataaactgttcatcggaggcctgcctaattacctgaatgacgaccaggttaaagaactg
ttgatgtcattcggatcactcaaagccttcaacctggtgaaggacagtgccacgtctctg
tccaaaggctacgccttctgtgaatatgtggacatcagcgccactgaccaggcggtcgtc
gggctcaacgggatgcagctgggtgataagaagctcatcgttcagagggcgagtgttgga
gctaaaggtgccaacttgacctccatcatagagaccccggtcactctgcagattcctggc
ttgcagaggctgcagaactccggcatgcccaccgaggtgttgtgtctcctcaacatggtg
atgcccgacgagctggtggacgatgaggactatgaggagatcttggaggacatccgcgat
gaatgctgcaagtacggcaacgtcctctccatcgagatcccccgaccgttggaaggagtg
gaagtccccggctgtggaaagatctttgtggagtacgtttctgctgcagactgtcaaaaa
gccatgcaggctctcaccggccgcaagttcgccaaccgagtggtggtgaccaaatactac
gaccctgacatgtaccatcgacacgcgttctga

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