Nematolebias whitei (Rio pearlfish): 119421270
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Entry
119421270 CDS
T08042
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119421270 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119421270 (utp18)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119421270 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_HPS5
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_NOL10_N
WD40_like
B-prop_COPA_B_2nd
Beta-prop_IFT122_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
119421270
NCBI-ProteinID:
XP_037544574
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Position
15:complement(37902634..37908863)
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AA seq
532 aa
AA seq
DB search
MADVIKLPNTEEKKRARKRTRPEKIDREKEEQLRQQNVKKLAVLGEEDESVMRLETLVFG
TEDELLERLVEPEEEEEQTGGLLLEEDLEQSEDEEEETPHHQELQTRKAAWVDEDDELHE
EVDMTHRYRRNLIKGQAESTMSKQKLQQRMRDQFQKSMGGAPSWAEPSSEKKKKKKAADE
EEEEDDEEEEDDLLRRTGNFVASSENLPSSILRMKKCLHANSAHPSEDRLTTVQFHPSAQ
VVMTAGLDQSISLFQVDGKTNPKIQSIHLERFPVHKARFSRDGETVIATSLRNKLFYLYD
MMEGRVVPVSSVRGLNEARVKEFCVCPDGGALLLSGTNGYLHLLTLKTNEVVRSMKINGD
ISGVAFSHDGSRVFVNSEAGEVFVWDVRSSRCVNRFTDDGCVKGTSIAASPNGRYLACGS
QSGVVNVYSQEACLNSTNPKPLKAVMNLLTSATSLAFNPSSEILAIASRVEDEAVRLLHM
KSLTVFSNFPVSKRKITYRTSCLDFSPHSGFFSLANNKGHAPLYRLLHYKDF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttatcaaactgccgaacactgaggaaaagaaacgggctcggaagagaacc
cgaccggagaagatcgaccgagagaaagaggagcagcttcggcagcagaacgtgaagaag
ctggcggttctgggagaggaggacgagtcagtgatgcggctggagactctcgtgttcggg
acggaggacgagctgctggagaggctcgtggagccggaggaggaggaggagcagacagga
ggcctgctgctggaggaggacctggagcagtccgaggatgaagaagaggagactccacat
catcaggagctgcagaccagaaaggctgcctgggtggacgaggacgacgagctccacgag
gaggtggacatgacgcatcgttaccgtagaaacctgatcaaaggacaggcggagtccacc
atgtccaaacagaaactacagcagaggatgagagatcagttccagaagtcaatgggaggg
gctccatcgtgggcagagcccagcagtgagaagaagaagaagaagaaagcagctgatgaa
gaggaggaggaagacgatgaagaggaggaagatgacctcctgaggaggacggggaacttt
gttgcgtcttcagaaaatcttcccagcagcatcctgaggatgaagaagtgtcttcacgcc
aacagcgcccatccctcagaggaccggctgaccacagtgcagttccacccttctgctcag
gtggtcatgacagccggactggaccagtccatctccctgttccaggtcgacggaaagaca
aacccaaagattcagagcatccacctggagcggttccccgttcacaaggcccggttcagc
cgagatggcgagacggtgatcgccaccagcctgaggaacaagctgttctacctgtacgac
atgatggagggccgggtggtgccggtcagctctgtcagaggtctgaatgaagcccgtgta
aaggagttctgcgtgtgtcctgatgggggcgctcttctgctgagcggcaccaatggctac
ctgcacctcctcaccctgaagactaacgaggtcgttcgcagcatgaagattaacggggac
atcagcggcgtcgctttttctcatgacggcagcagagtttttgtaaactcagaggccggc
gaggtgtttgtgtgggacgtgcgcagcagtcggtgtgtcaacaggtttacagacgacggc
tgcgttaaggggacgtccattgctgcctcaccaaacggacgttacctggcctgtggctct
cagtcgggcgtggtcaatgtctactcccaggaggcgtgtcttaactcgaccaatccgaag
cctctgaaggcagtgatgaacctgctgacctcagccacatcgctggcctttaacccctcc
tctgagatccttgccatcgcctcacgggtcgaagacgaggctgttcggctgcttcacatg
aagagcctcactgtgttctccaacttccccgtctcaaagagaaagatcacttatcggacc
agctgcctcgacttctcgccacacagcggcttcttctcattggctaacaacaaaggccac
gcccccctctacaggttgctgcactacaaggatttctga
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integrated database retrieval system
