Nematolebias whitei (Rio pearlfish): 119421307
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Entry
119421307 CDS
T08042
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119421307 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119421307 (grin2ca)
04082 Neuroactive ligand signaling
119421307 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119421307 (grin2ca)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119421307 (grin2ca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119421307
NCBI-ProteinID:
XP_037544609
LinkDB
All DBs
Position
15:40081168..40128470
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AA seq
1414 aa
AA seq
DB search
MGVGRGCWSDSPWWLPPPPLLLLFCAIPLCSGRPFGFPSPSVNVAVVFSGPAYQTEIKGR
LSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDSVGSEAVAQILD
FISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVIT
SLYPGYETYVDYIKSFTDTSYFMWDLQDVLSFDMSADSLNDIRARRLLQQIDTQVLLVYC
SHEEAQYLFTMAAEAGLVGPGYIWIIPSMAVGNPDIPPPGSFPVGLISIITDRWRMSLRK
RVRDGVAIVVKGVQGFRKQRGFIPEGHSDCHNPVKLPAANDTLFRHMLNITWEHNDFSFN
SNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLQPVSDYRHLTVATL
EERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSR
NIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLV
TAKNPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANL
AAFMIQEQYIDTVSGLSDKKFQKPHEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYN
QKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDS
RWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLLYWKLRHSVRKSNRLDCLLAISRGIYSCFNGVEQTDHNGSMQSPDITSN
YTQANMLKMLRTAKDMVSSARVENSLDSATKTIENWSRRGADNVRAGLPPRVTTTDMTHG
RLPYISSITDNHSPYPHRAITPTFPVHYGDTSTQPLLEKPRVVTRPLPLGYTLPTRSNQH
LLERTLPISSLSSPHIAIRDPTPSGPSIPHHSSRLYVDNQARHPTSPFAPYRDFQVPDIY
MEQKGALRRKFSYPPDCMSKKQKSFTYLFDAADPRVRADYDEPRSCFAELRANHLLNNHT
PDAAAMACTGGHYHGSSTNCNSCMKSYLEPDMDDIPLLGKDKLNRRASFLKATWGNDRIH
QVDETKPSTSTSPSTRADMPDLFPRVVCPNPKPHKLYGSLGHNLSCYPMAAEPAYLDPAH
MCSYPYKQKLKYCDSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVSP
LAQGPSQFYNNPKDMCHLIPCTSHCPEKAALMHRVNDRHLVSHNNMFGAYDSTGKREDLG
SGSRQRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggtcgaggctgctggagcgactctccgtggtggctgccaccgccgcctcta
ctactgctgttctgtgccatcccactttgctcaggccggccctttggctttccctcaccc
tctgtgaacgtggcggtggtgttcagcggcccggcctaccagacggaaataaaggggcgt
ctgagccgagagaacttcatggacctgcctctggaagtgaaccccatcactgttctggtc
aacaacacaaacccccgggctctgctcacccgcatctgtgacaccctctccaccaaccgt
gtccatggcgtggtgtttgaggacagcgtcggttcggaggctgtggctcagatcctggac
ttcatttccacccagacagctgttcccatcgtgggcatcagtggaggctcggctgtcgtc
ctgccatacaagggtgagggctccaacttcctccaactgggatcctccatcgagcagcag
atcaacggcatgtttaaggtgatggaggagtacaactgggacagttttgtggtcataacc
agcctctatccaggttatgaaacgtatgtggattacatcaagtccttcactgacaccagc
tacttcatgtgggatctccaggatgttttgtccttcgacatgtccgccgacagcttgaac
gacatacgagcacggaggctgctgcaacagattgacactcaggtgctgctggtctactgc
tcccacgaagaggcccagtacctgtttactatggcagctgaagccggactcgtggggcca
ggctacatttggattatccccagcatggctgtgggaaacccagacatccccccacctggc
agcttccctgtggggctcatcagcatcattacggaccgctggaggatgagtctgaggaag
agggtgcgggatggagtggccattgtggtgaaaggcgtccaaggctttcggaaacaaaga
ggctttatccctgagggtcacagtgactgtcataaccccgtcaaattaccagcagctaat
gacaccctgttcagacacatgctgaatataacctgggagcacaacgacttctccttcaac
agtaatggctacctggtgaatccagccatgatcgtcatcactctggacagagagagacag
tgggacaaggtggggacctatgagatggggatcctgcagatgagataccccgtctggcca
cggttcggttcctacctgcagccggtgtcggattacagacacctgacggtggccaccctg
gaggagcgacctttcgtcatcgtagaggcagttgaccccgtgacagggacctgtgttagc
aacaccgtgccctgccgacgacagtccaacaagaccgagaccatcgtaggtcacacagag
ccatacaccaaactgtgctgcaaaggcttctgcatcgacattttgaagaaactttcccgc
aacataaagttttcctacgacctgtacctggttacaaatgggaagcacggaaagctggtc
cggggaatttggaacgggatgatcggggaggtattctacaaaagggcagacatggccatc
ggctcactgaccataaacgaagagcgttcagaaattatcgacttctcagtgccatttgtg
gaaacgggaatcagtgtgatggtggcaagaagtaacgggactgtttctccatctgcattt
ttagaaccgtacagtccagcagtctgggtgatgatgttcgtcatgtgtctgaccgtggtg
gccattacggtctttgtctttgaatactgcagtccagttgggtataaccgcagcctcgtc
accgccaaaaatcctggaggtcccacgttcaccattggaaaatcagtttggctgctgtgg
ggtatcgtctttaacaactctgttcctattgagaacccaaagggcaccactagtaagatc
atggtcctggtctgggctttttttgccgtcatcttcttggcttcctacacggccaacttg
gctgcctttatgatccaggagcagtacatcgacaccgtctctggactgagtgacaaaaag
tttcaaaagccacatgagcagtatccaccatttcgcttcggtactgtcccaaacggaagc
acagagcgcaacattaggagtaactaccctgagatgcactcccacatggttaaatacaac
cagaagggagtagaggatgcccttaacagccttaaaacagggaaactggatgctttcatc
tatgatgctgcagtgctgaattacatggcaggaaaagatgagggctgcaaattagtaacc
atcggcagtggaaaagtctttgctactactggttacggcattgccctgcagaaggattca
cgctggaaacgacccatcgacctggcactgctgcagttcctggctgatggtgacacacag
aagctgcagaccgtgtggctcacaggcatttgccgtaatgaaaagaaggaggtgatgagc
agcaagctggacatcgacaacatggcgggtgtcttctacatgctgctggtcgccatgggc
ctgagcctgctggtgtttgcctgggagcatctgctctactggaaacttagacactccgtt
cgcaaatcaaaccgactagattgtctcctggctattagcagaggcatctacagctgcttt
aatggagtagagcaaactgaccacaatgggagcatgcagagtccagacatcacttccaac
tatacacaagccaatatgcttaaaatgctgaggacagccaaggacatggtgtcctctgcc
agagtggagaactctcttgacagtgccactaaaacaatagagaactggagcagacgggga
gccgacaatgtgcgagctggtctgcctcccagagttacaaccacagacatgacccatggc
cgtctgccttatatctctagcattacagacaaccactcaccataccctcacagggctatt
acgccaaccttcccagtgcattatggggacacttccactcaacctctcttggaaaagccc
agggtggtaacccggcctttgcctcttgggtacacactgcctacccgcagcaatcagcat
ctgttagagagaactctacccatctccagcctcagcagcccacacatcgccattagggat
cctactccttctggaccttcaattccccaccacagcagcaggctgtatgtggacaaccag
gcccggcacccaacgtctccctttgcaccttatagggatttccaggtacctgacatttac
atggagcaaaaaggagccctgaggagaaagtttagttatcccccggactgtatgagcaag
aagcaaaagtcttttacttacttgttcgacgctgcagaccctagagtgagggctgactat
gacgaacctcgatcttgctttgctgagttgagggctaatcaccttttaaacaaccacact
cctgatgctgctgccatggcctgcactggaggacactaccatggcagtagcaccaactgc
aactcctgcatgaagtcttacctggagcctgacatggacgatatacccctcttgggaaag
gacaaactaaatcggcgtgcctcgttcctcaaagccacgtggggcaatgaccgaatccat
caggtggatgaaactaagccttccacgtccacatctccctccacccgagcggatatgcct
gatttgtttccacgggtagtatgtcctaacccaaaacctcacaagctatatggcagttta
gggcacaatttgtcctgctaccccatggctgctgagccagcctacttggaccccgctcat
atgtgttcctacccatacaagcagaagcttaagtattgtgactctactcgactaccctct
tacagggaagccatcctgcagaatgccgctgccctgcgccgctcctcctccacagtggtg
cacagacattattccacctacctgaactcttacacagacttaccagtgtacgtgagtcca
ctggcacagggaccatcacagttctacaacaatcctaaggacatgtgccacttgattccc
tgtaccagccactgcccagaaaaagcagcattgatgcatcgtgtaaatgacagacatttg
gtttcccacaacaacatgtttggggcctatgatagcacaggaaagagggaagacctgggc
tctgggagcagacagcggaggcaggtgttggtggcgcgaagagtcaacagtccttatgtg
ccaaagccctggggcagggtatctagtctggagtctgaggtctga
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