Nematolebias whitei (Rio pearlfish): 119421330
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Entry
119421330 CDS
T08042
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecule (CAM) interaction
nwh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119421330 (lrrc4ba)
04517 IgSF CAM signaling
119421330 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119421330 (lrrc4ba)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
NGL family
119421330 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
119421330
NCBI-ProteinID:
XP_037544631
LinkDB
All DBs
Position
15:complement(40930411..40944149)
Genome browser
AA seq
731 aa
AA seq
DB search
MRIATLTCRPGPSPFLFSLAHLLLRLLLAGPELVGAASSSCPSLCTCSNQASRVICTRQN
LEEVPESISVNTRYLNLQENSIQVIKSDTFKYLRHLEILQLSKNQIRQIEVGAFNGLPNL
NTLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLD
FISDAAFMGLINLRYLNLGMCGLKDIPKLTPLVRLEELELSGNRLEIIRPGSFQGLVSLR
KLWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCN
CDVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVT
EGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTC
MVTNAAGNTTATAVLNVTAADTSVNYTYFTTVTVESLEPGGGKGFASVAYNETFIPIQPG
STPSNQWPYGVPTTDSSLPPGWSSSSPHATRPTFTVPITEPGSSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELAAGAGGRGSGISGGSTVT
QSGGSGIGGGQSLRLHHPEIVNLPNLARTEHLNHYYKTHHFNNMMGLGMSTGVGLNNNNN
PSPCSQTQNLSCSQVSTTTCGGMPSCGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLFKN
GSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccgccctggcccctcccccttcctcttctcattggcc
catctactgctgcggctcctcctcgccgggccggagttagtgggagccgcctcctcctcc
tgcccgtcgctctgcacgtgctccaaccaggccagccgagtcatctgcaccaggcagaac
ctggaggaggttcccgagagcatatcagtcaatacgcgatacctcaacctgcaggagaac
tccatacaggtcatcaagtctgacaccttcaagtacttgaggcaccttgaaatccttcag
ctctccaagaatcaaatacggcagattgaggttggagcatttaatggcctccctaacctc
aacacgctggaactgtttgacaaccgcctcacactggtgccatcgcatgcctttgagtac
ctcagcaagctgcgagagctttggctgcgcaacaaccccattgagactctgccgggctat
gccttccaccgcgtgccctcgctacgtcgcttggacctgggtgagctcaagaagttggat
ttcatctccgatgcagccttcatgggcctcattaatctacggtacctaaaccttggcatg
tgtgggctgaaagacattccaaaattaacacctcttgtgcgtttggaagagctggagttg
tcaggaaatcgtctggagatcattcgtcctggttctttccagggattggtgtctcttcgg
aagttgtggctaatgcactcgcaggtgtcagtcattgagcggaatgcctttgatgatcta
aaaagcctggaggagctcaatttgtctcataattctctgcactccttgccccatgatctg
ttcacaccccttcaccagctggagagggtgcacctcaaccacaatccctgggtctgcaac
tgtgatgtgctttggctcagctggtggttgaaggagacggttcccagcaacaccacctgc
tgcgctcgctgccacgctcctccagtcctaaagggcaagtacatcggagaacttgaccag
agccacttcacctgctttgcacctgtcatagtagagccacccactgacctgaatgtcacc
gaaggcatggccgccgagctcaaatgtcgcacaagcacgtcaacaacgtctgtcaactgg
atcacccctaacggcaccctcatgacccatgggtcttaccgtgttcggatatccgtcctg
cacgatggcacgctcaacttcacaaatgtcaccctgcgagacacgggtcagtacacttgc
atggttaccaatgctgctggaaatactaccgccactgctgtcctcaacgttactgctgct
gataccagtgtcaactacacctactttacaacagttaccgtggagtcattggagcctgga
ggaggtaaaggttttgcatcggttgcctataacgaaaccttcatccccattcagcctggc
tccaccccttctaaccagtggccatacggggttcctaccacagactcttccctgcctcct
ggctggtcctcctcctctcctcatgcaactcgacccactttcactgtgccgatcactgag
ccaggctcctcgggcttggacgatgtgatgaagaccaccaagatcatcattggctgcttt
gtagccattacattcatggcagcggtgatgctggtggtgttctacaagctgaggaagcag
caccagctgcacaaacaccatggtccagctcgcgccatcgagattataaatgtggaggac
gagcttgctgctggggccggtggtcggggcagtgggatctccggaggctccactgtaaca
caaagtggaggcagtggaataggtgggggccagagtctccggctgcaccatcctgagata
gtcaacttacccaacctggctcgaacggaacacctgaaccactactacaaaactcatcac
ttcaacaacatgatgggcctgggcatgagcacgggtgttggcctcaacaacaacaacaac
ccatcgccgtgttctcaaacacagaacctatcctgctcccaggtttcaacaaccacctgt
ggagggatgccctcatgtggtaccctgccctctcctgtacccctgccccagttgggcctg
cacagttccctaaaaggcctaatgggaaagggccagaatgagccactactttttaagaat
ggctccaaggaaaacgtgcaagagactcaaatctag
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