Nematolebias whitei (Rio pearlfish): 119421336
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Entry
119421336 CDS
T08042
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119421336 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119421336 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119421336 (coro1a)
04147 Exosome [BR:
nwh04147
]
119421336 (coro1a)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Phagocytosis
Coronins
119421336 (coro1a)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119421336 (coro1a)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119421336 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Trimer_CC
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDCP
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
MAD
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
DUF7310
BLOC1_2
DivIC
Motif
Other DBs
NCBI-GeneID:
119421336
NCBI-ProteinID:
XP_037544635
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All DBs
Position
15:complement(41330886..41341236)
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AA seq
456 aa
AA seq
DB search
MSRKVVRSSKFRHVFGQAVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFM
VLPLTKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGLTSSL
TEPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVLILWNVARGEAVMRFDSEHTDLIYS
ACWNQDGSRILTSCKDKTLRVLDPRKGTVLLEKEKPHEGSRPVRAVFVSDGKILSTGFSR
MSERQVALWDPSNFSEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADEWFGGKEAPPVLISLKDGFTATTKAKEFKVHKSLLKTTTASAGS
HPSSSEDVQSLKKELKGLKAAVEELTKRVKELESKH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggttgtgaggtccagcaagttccgccacgtcttcggtcaggccgtgaag
gccgaccagtgctacgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tccgttaaccccaagttcgtggccatgatcgtggacgccagcggtggaggggccttcatg
gttctgcccctgaccaagaccggacgtattgacatgtcctaccccaccgtctgcggccac
acaggtccagtcctggacattgagttctgcccccacaacgacaacatcattgccagtggt
tctgaggactgcagcgtcatgatctgggagatcccggacggcgggctgacctcgtcgctg
acagaacctgttgtcaaactggacggacactcgaaacgagtcggcatcctgagctggcac
cccaccgcccacaacgtgctgatgagcgcaggctgcgacaacgtgctgatcctgtggaac
gtggctcggggggaggcggtgatgaggtttgacagcgagcacacagacctcatctacagc
gcctgctggaaccaggatgggtccaggatcctcacctcctgtaaggacaagaccctgcgg
gtgctagaccctcgcaagggcaccgtcctcttagagaaggagaaacctcacgagggctcc
aggcccgtccgggccgtgttcgtgtccgacgggaagatcctgagcaccggcttcagtcgc
atgagcgagcggcaggtggcgctgtgggatccgagcaacttttcggagcctctgaccctg
caggagctggacaccagcagcggcgtcctcctgccgttttttgacccagacaccgggatc
gtctacctctgtggcaagggcgacagcagcatccgttacttcgaagtgacagacgaagct
ccgtacgtccactacctgtccatgtacagcagcaaggagagccagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaaatgtgaaatcgccaggttctacaaactccac
gagaggaagtgtgagcccatagtgatgacggtgccgcgcaagtcggacctgttccaggag
gatctgtacccggacaccatcggtcctgagccctcggttgaggcggacgagtggttcggt
gggaaggaagcgccgccggttctgatttccctgaaggacgggttcacggccaccaccaaa
gccaaagagttcaaagttcacaagagtctcctgaagaccacgacggcttctgccgggagt
catccgagcagcagcgaggacgtccagtctttgaagaaggagctgaagggcctgaaagca
gccgtagaggagctgaccaagcgcgtgaaagagctggagagcaaacattga
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