KEGG   Nematolebias whitei (Rio pearlfish): 119421383
Entry
119421383         CDS       T08042                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137  Mitophagy - animal
nwh04144  Endocytosis
nwh04145  Phagosome
nwh04148  Efferocytosis
nwh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119421383 (rab5c)
   04145 Phagosome
    119421383 (rab5c)
   04137 Mitophagy - animal
    119421383 (rab5c)
   04148 Efferocytosis
    119421383 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119421383 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nwh04131]
    119421383 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nwh04147]
    119421383 (rab5c)
   04031 GTP-binding proteins [BR:nwh04031]
    119421383 (rab5c)
Membrane trafficking [BR:nwh04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    119421383 (rab5c)
 Endosome - Lysosome transport
    119421383 (rab5c)
Exosome [BR:nwh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119421383 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   119421383 (rab5c)
  Exosomal proteins of colorectal cancer cells
   119421383 (rab5c)
  Exosomal proteins of bladder cancer cells
   119421383 (rab5c)
GTP-binding proteins [BR:nwh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    119421383 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 SDR-like B12-binding
Other DBs
NCBI-GeneID: 119421383
NCBI-ProteinID: XP_037544678
LinkDB
Position
15:complement(44686812..44700811)
AA seq 220 aa
MAGRGGPARTNGTSASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcggggcgaggcggaccggcacggaccaacggcacttctgcaagcaacaagatctgt
cagtttaagctcgtgttgttgggagaatcggctgtggggaagtccagcctggtgctgcgc
ttcgtcaaaggccagttccacgagtaccaagagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtcaagtttgagatttgggacactgcaggacaa
gaacgatatcacagcttggcacccatgtactacagaggagcccaggccgccattgttgtc
tttgacatcaccaacacagatactttcacgcgtgcaaaaaattgggtgaaggagctccag
cgacaagccagccccaacatcgttatcgcactggcaggaaacaaggcggacctggccaac
aaaagagccgtagatttccaggaagcacaagcatacgctgatgacaacagtttgctcttc
atggaaacttcagccaaaactgctatgaatgttaatgagatttttatggctatagccaag
aagcttccaaagaacgagcctcagggtggagcgggcgctggtggacgagccagaggtggc
gtggacctgcaggaagctgcgccgcagggcaggagcggccagtgctgtgggggcgggaac
taa

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