Nematolebias whitei (Rio pearlfish): 119421520
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Entry
119421520 CDS
T08042
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
nwh04137
Mitophagy - animal
nwh04144
Endocytosis
nwh04340
Hedgehog signaling pathway
nwh04350
TGF-beta signaling pathway
nwh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119421520 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119421520 (smurf1)
04350 TGF-beta signaling pathway
119421520 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119421520 (smurf1)
04137 Mitophagy - animal
119421520 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119421520 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119421520 (smurf1)
04121 Ubiquitin system [BR:
nwh04121
]
119421520 (smurf1)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119421520 (smurf1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119421520 (smurf1)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119421520 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119421520 (smurf1)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
HECT type E3
119421520 (smurf1)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119421520 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119421520
NCBI-ProteinID:
XP_037544797
LinkDB
All DBs
Position
15:21073385..21118466
Genome browser
AA seq
724 aa
AA seq
DB search
MSNPGNRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGGGTVVDCRGLLENDAPVFEGCFSEEPLPYSDPTGAA
GGGNCRLDSPGQENRLQSQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQVY
FLHTQTGVSTWHDPRIPRDLASRSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTDP
RLHTIISQQSQVKETSQPPQMEVGVEEGGVGGVNGGDGDLAVRYERDLVHKLKLLRHELS
LQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYL
LCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGSF
TLPFYKQLLGKPIQLNDLETTDPELHKSLIWILENDITSVLDHTFCVEHNAFGKFSQHEL
KPNGRNISVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKELEL
IIGGLGKIDLADWKANTRLKHCTSESNVVRWFWQAVEDFSEERRGRLLQFVTGSTRVPLQ
GFKALQGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDVPPYESYEKLYEKLLTAVEETCG
FAVE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggaatcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcggctaccggatccattcgccaaggtc
gtggtggacggatcgggtcagtgccactccaccgacacagtcaagagcaccctggatccc
aaatggaatcagcactatgacctctacatcgggaagacagactccatcaccatcagtata
tggaaccataagaagatccataaacgacagggagcaggttttttgggttgcatacgcctg
ctttctaatgcaatcagcaggctaaaagacacaggataccagcgtctagatctgtgtaag
ctgaacccttctgacagtgatgcagtgagggggcagattgtagtgagtctacagacgcga
gatcggatcggcggtggcaccgttgtagactgcagaggattgttggaaaacgatgcgcct
gtgtttgaggggtgtttcagtgaggaaccgctgccctactctgaccccactggtgctgcg
ggaggcgggaactgccggctggactccccgggtcaggagaaccgtcttcagtcgcagcga
atcagagggcaggactccagaggtcacggccacacccctcagaacagaccccacggacat
cagccgcctgaccttccggagggatacgagcagcgaaccaccgttcagggccaggtgtac
ttccttcacacacagacaggggtcagcacctggcacgaccctcggatacctcgggacctg
gcaagtaggagctgtgaggaactcggtccattacccgtgggctgggaggtccgaagcact
gtgtccggacgcatctactttgtggaccacaacaacagaaccacacagttcacagatcca
cgtcttcacaccattatcagccagcaatctcaagtaaaagaaacctcccagccccctcag
atggaagtgggggttgaagaggggggagtcggaggagtgaacggtggagatggagatttg
gcggtgcgctatgagagagacttggtgcataagttgaagctgctccgccacgagctatcg
ctgcagcagcctcaagctggacactgtcgtatagaggtgtcccgcgaggagatctttgag
gagtcgtatcgacagataatgaagatgaggcccaaagacctgaagaagcggctgatggtg
aagttcagaggagaggagggtctggattatggaggggtggccagggagtggttgtacctt
ctgtgccatgaaatgttgaacccgtactacggcctgttccagtactccacggacaacatc
tacacgctacagatcaaccccgactcttccatcaatcctgaccacctgtcatatttccac
ttcgtgggtcgagtcatgggcctggcggtcttccacagtcactacatcaatgggagcttc
actctgcccttctacaagcagctgctcggcaaacccatccagctcaacgacctggagacc
acggaccccgagctgcacaagagcctcatctggatattagaaaacgacatcacttcggtc
ctggatcacacgttttgcgtggagcacaacgcctttgggaagttctcacaacacgaactg
aaacctaacggcagaaatatctcagtcacggaggagaacaagaaggaatacgtcagactc
tatgtgaactggaggttcatgcggggaattgaagcccagtttctggctctacaaaaaggt
ttcagtgagctgatcccgcagcacctcctcaaaccttttgaccacaaagagcttgagctg
atcattggtgggcttggaaagatagaccttgcggactggaaggccaacacccgcctgaaa
cactgcacaagtgaaagcaacgtggttcggtggttctggcaggcggtggaggacttcagc
gaggagaggagagggcgcctcctgcagtttgtcacaggctccacccgggtcccactacag
gggttcaaagctctgcagggttctgcaggaccaaggctcttcaccatccacctgatagac
gccaacacggacaacctgcccaaggctcacacctgtttcaacaggatagacgtccctccc
tacgagtcttatgagaaactttatgaaaaactgctgacggccgtggaggagacctgcggc
tttgctgtggagtga
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