Nematolebias whitei (Rio pearlfish): 119421594
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Entry
119421594 CDS
T08042
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119421594
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
119421594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
119421594
NCBI-ProteinID:
XP_037544865
LinkDB
All DBs
Position
15:29805677..29817945
Genome browser
AA seq
2196 aa
AA seq
DB search
MQSFRERSSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGQSRL
AYEAHTLANTTSMPPAGGAGIGGGPKDCYNQQNYAGYQGNSGGNGNGNGGSTVSQAKKPF
RGSKVPPPNPSQHLQGPGGYSNHLGPGTYSAQYMNEGHLQQKWEDPAQLAQYDQEIVGRL
EASATPAPGSSQFVDSNILGHSQTQCHQPSTTNYTSPHHQPHPPNPAPSPLMYPQSHLHY
PQHSPSPSSYMEKCSPLPHCYKGYNMPQNSQYGRQMSSHSSLKQAVYRSPQNSYGYPQSN
PRGYEQQPPLQAMTNPQESHPKYQHYNQPQPNYCLSELPVRSPEQYYQTCSPSSSHSPAR
SVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGATSSSSSSSAGMQEQASANTMLMPPRSH
PSPNIPHPTPHSYSTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSE
ALVANKKGGKRTSGGSNSSGGSGVSSKKGEEYKSPPYPDGCGNVGGGPIQDPYSTPQHPS
LPMELHEGGYSSSSDEPLDRGYYYFGQGRSPAQAHNNTQLSLDTASSCSIASPDDMSTRS
GDSSLHNLTPDPTRCHMGQGGDGMSTPAKSIGDETSPTSITVSSPLKQERDSPSDIHHIN
QPVKENFEESAWTEKSAEKDELTTVKTSDSVRDSDTTNLTERHEKWSDEDKSPAPYSKVN
TEMTEKNYCYEETAYQDVQGKYDSDARYSVEQSPAAFSDSSNKDHFGQEIKSEAFKSESP
TASESSVKTLPFTSREDLEQDQYFTEKEESSENTSPTPKVEALDDSSSDKRENRDPENEK
EEEGRGKDIIEEKRCDIQKTIKTSFSPLSTGEVGEEQEGEEIESQSLTQELISSDSQENY
SGDHNSKTESTNSVLITDSNFAGAPEHLSAAAATTATDASTMESAIGDTAPQSHSATPVF
SALNDKMTSSGQSRDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDIEP
GISCASAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIVHSGVGLRRQLSLEREGEKGEEG
ANSPTQKACMPTSKTLLYSDQTNLAQQEPIVSQAPKMSTDTIQSRMCTRSFNAPDMTPKV
ELNMKRKPGPSSKPGPKPDVTPGLKPGAKPGPRPGPKPSVKSGSKPGTKSGQKLVSSEPE
MSPKIEITIKQKPGPKSGLKPGPGSKPGPKPGSKPVLKPADVLSSVDAASIKAPVGRPRG
SNSKARLDNQEDTSQHLTELQSKVRKSLKVTISQKNQDVKSTEQQEKQVHSELKVHEKES
KNMVLRSRKPSQEKVSKEKEKIIEEVIQTQTLTEMKGNDDTSKAEEVMAMEQNPSPDAVK
QTDIPENSPASPALPVQSNESMDKTLPPLKRKCNLEVSIIPLKKKRGPKPKLKTAPPQPA
LRKQVAPIPEDKSVQGPRRRGPTKKASVTKDTPSNISGTNISDVQVVTPQCPTKKVLPPR
KGRGQKYEAMVQKITSPSLKKHLPATQQDSSDDVTTKALSEFALKEGETSIPLSNTETIE
SLKEGVKYEGAVKKELSQEREKHEVGQKTSTQEEGGMRAENEVTQKNDTSQKNIKTEIKQ
DVGDDKVYTSKETQLEVGAPVEKTQQASESVSTADTKSARTKRKRWAMVESTDASVVALE
ADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGEATLEKTETVEEPNNETVEKQEHFEE
KVPPTEPTVPLPISQYEIIEDPQAVSSELIQKPRRGRKPSANPSKRKRGKTLMEQILSKP
VKVHKKPGPKPGMKDAIEVIEAVVRAAGCEQTEKEEREKEDIERRGKETVENQETCIVGP
VVTVTDKQTEVISVKKIRRKPAHQHSKLSFCPYVRINNSRDFSSWCAIVNKPEDAVVFQR
RRKKGILRMRNPFTVAKVVPHTAAMLLGPMLNTSLIGRSLTCCLCGKPANYKDLGDLCGP
YYTEESIPRKFLTATHTRSFREESKKIDANDSSTTEVPDSSSNNEGATSSEKERNTEASS
QETRGSRHHHWRYRRPERPERLCQEGRPRRLTLRDWFRKIKQLHTVSTEDPKDQEGNESK
FQRLQMEAEAKEHWAHENCTIWTKGIIMVSGRLYGLKEAANKSAQMSCYKCQIVGASLSC
CWRGCSYKYHYVCAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcagtggttaccacagcaaccaaccctgctaccagcag
gaaccccatgaattatctcggctggagacctaccggcaacacccacatcatcctcacccc
cagcacccgcacccaggccccggtccacatccaggcccaggtccagggcagagcagattg
gcttatgaggctcataccttggcaaacactactagcatgcctccagctggtggagcggga
attggaggaggacccaaagactgttacaaccagcaaaactatgctggttaccaaggaaat
agtggaggaaacgggaatggaaacgggggctctacagtctctcaggcaaaaaagcctttt
cgaggaagcaaagtacccccaccaaacccaagtcagcacttgcagggtcctgggggctac
agtaaccacttaggtcccgggacttattcagctcagtatatgaatgagggacaccttcag
caaaagtgggaggacccagcccagttagcacagtatgaccaggaaatagtgggacgtttg
gaggctagtgccacacctgcacctggttcctcccagtttgtggactcaaatatccttgga
cactctcaaacccagtgccatcagccttcaaccacaaattatacaagtccccaccaccaa
ccccaccctcctaaccctgccccctcacctctcatgtatccccagagtcacttgcactat
ccccagcactctccctctccatcatcatatatggaaaaatgcagtcctcttccccattgt
tataaaggttataacatgcctcaaaattcccagtatggcaggcagatgagtagccacagc
agtttgaagcaggcagtctataggtctcctcagaacagttatgggtacccgcagtcaaat
ccaagagggtatgagcaacagccccctttacaggcaatgaccaacccccaagaatcccat
cctaaatatcaacactacaaccaaccccaaccaaactactgtctctcagagctgcctgtc
agatctccagaacagtattatcaaacttgtagcccctcctcaagccactcccctgcacgt
tctgtagggcgctccccctcatatagttccaccccttcacctttaatgaccaatccagag
tcatttcagtatggccaaccacccatgacacctggggcaacctcctcttcttcatcctct
tcagctgggatgcaagaacaagccagtgccaacacaatgttgatgcccccacggtcacat
ccttcacccaacattccccatccaaccccccacagctactcaaccacaccacaagtaccc
accatgaaagaacgattctcagagaagttgttgtcaaaccccagcttgtggagcctgaat
gccctcacctctcaggtggaaaatatctccaataatgtccaacaactactgctttcagag
gcactggttgcaaataagaaaggcggtaaacgcacaagtggtgggagcaacagcagtggt
gggagtggcgtgtcctccaaaaagggtgaagaatacaaaagtcctccatatccagatggt
tgtggtaatgtgggtggagggccaatacaagacccttactctaccccacagcacccgtct
ctgcccatggaactccatgagggtggctactccagcagtagtgatgaaccactcgacagg
ggctactattactttggccagggcagaagtccagcccaggctcataacaatacacaactc
agcctggacacagcctcttcttgctctatcgcatctccagatgatatgtccaccaggtct
ggggactcaagtctgcacaaccttacccctgatcctactagatgtcacatggggcaggga
ggagatggcatgagtactccagcgaagagcattggggatgagacctctccaacaagcatt
acagtttcaagtcctttgaaacaagaaagagattctccttcagatattcatcatatcaat
cagcctgtcaaagaaaattttgaggagtcagcatggacagagaaatccgctgaaaaagat
gaactaacaacagtaaaaacttctgactctgtaagagattcagacacaactaaccttaca
gagagacatgagaaatggtcagatgaagacaaatctccagctccttatagcaaagtaaac
acagagatgacagaaaaaaactattgctatgaggaaacagcataccaagatgttcagggt
aaatatgactctgatgcaagatattcagttgaacagtccccagcagctttctctgactct
agcaacaaagaccactttggtcaagagataaaatcagaggcattcaaatcagaatctcca
actgcatctgagagctctgtgaaaacgttgcctttcacttcaagggaagaccttgagcag
gatcaatatttcacagagaaagaggagagctcagaaaacacatctccaacccccaaagta
gaagccttggacgacagtagctcagataaaagagagaacagagatccagagaatgaaaaa
gaggaagagggaagaggtaaagatattattgaggagaagcggtgtgatatacagaaaaca
ataaaaacctctttttcccctctttcaactggagaggttggggaggaacaagagggggag
gagatagaaagccagtcattgactcaagagctcataagtagtgatagtcaagagaattat
tcaggagatcacaacagcaagacagagagtacaaattctgtgcttattactgatagcaac
tttgcaggggcacctgaacatctaagtgcagcagcagcaaccacagcaacagatgcttct
actatggagtcagccattggtgacacagctcctcagtctcattctgcaacaccagtcttc
tctgctctcaatgacaagatgacatcttcaggtcagagtagggatcatattgatcacagc
gatgctaaagttcttgaaccagactctcctcagctgccaggaaagtcaatacttccctct
gccccatcctgggcagataccccaccttctcccaaaaaaggtgatgaggatatagaacca
ggcatcagctgtgccagtgctgtgaccccactggctaaaccagagcctgtggccccatct
gctcagccaagggcatttgggcgtaagcatgccaggggaagaaggaggatagtgcattca
ggtgtaggattacgacgacagctaagcttggaaagagaaggggaaaagggagaggaaggt
gcaaactctcctacacaaaaagcatgcatgcctacaagcaaaactcttttatactcagat
caaaccaacttagcacaacaggaacctattgtgagccaggctcccaaaatgtcaacagat
actattcaatcaagaatgtgcactcgatcattcaatgcaccagatatgactcccaaagtt
gaacttaacatgaaaagaaaaccaggtccaagttctaagcctgggccaaaacctgatgtt
acacctggactaaaaccaggagcaaaaccagggccaagaccaggacctaaacctagtgtg
aagtcgggctcaaaacctggaacaaaatcaggacaaaaattggtgtcaagtgagccagaa
atgtcccccaaaattgaaatcacaataaaacaaaaaccagggcccaaatctggtttaaaa
ccaggaccaggatcaaaacctggtccaaaaccaggttctaagcctgtgcttaagcctgca
gatgtgttgtcctcagtggacgccgcatcaatcaaggccccagtgggtcgtcccagaggt
tcaaattctaaagccaggttagataaccaagaagacacaagtcaacatttaacagaactg
caaagcaaagtcaggaagagcctaaaagttacaatatcccaaaagaaccaggatgtaaag
tcaacagaacaacaggaaaaacaagtacactcagaactaaaggtacatgaaaaggaaagt
aagaatatggtattgaggtccaggaagccctcacaggaaaaagtgtctaaagagaaagag
aaaattattgaagaggtcattcaaacccaaacacttactgaaatgaaaggcaatgatgat
acgtcaaaagcagaagaggttatggctatggagcaaaaccctagccctgatgcagtcaaa
caaacagatattcctgaaaactcacctgcttcacctgcactgccagtccaatcaaatgaa
tctatggataaaacactccctccactaaagaggaaatgtaacctagaagtttcaataata
ccattgaaaaaaaaaagaggtccgaagccaaaactaaaaacagcgccacctcaacctgcc
ttgcgaaaacaagttgcccccatacctgaagataagagcgttcaaggtcccagaagaaga
ggaccaaccaagaaagcctctgttactaaagacactccttcaaatatcagtggaactaac
atcagtgatgtgcaagtggtgacccctcaatgccctaccaaaaaagttctcccaccccgc
aaaggcagagggcagaaatatgaggccatggtacagaaaattacatctcctagcctaaag
aagcaccttccagctactcaacaggacagcagtgatgatgtaacaactaaggctttgtct
gaatttgcccttaaggaaggtgagacttctataccattaagcaacactgagaccatagaa
tctctaaaagaaggtgtaaaatatgagggggcagttaaaaaagagctgtcacaagaaagg
gaaaagcatgaagtgggtcaaaagacatcaacacaggaagagggaggaatgagggcagaa
aatgaggttacacagaagaatgacacaagccagaaaaatattaaaacagaaatcaagcag
gatgttggagatgacaaggtttatacttcaaaggagacacaattagaagttggggctcca
gttgagaagacacaacaggcttcagagagtgtatcaactgctgacaccaagtctgccaga
actaaaaggaagagatgggcaatggtggagagtacagacgcctcagttgtagccttagaa
gcagatagtctcataattacgactccaaggcttgccaaacagagggctattaaaaataac
cacgaaatgcacctaaaacaaagaaggaagaaaagaaaaggtgaggccactttagagaaa
acagagaccgtggaagagccaaacaatgaaacagtagaaaagcaagaacattttgaagaa
aaggttccacccacagagcccacagtaccgctaccaattagccagtatgagatcatagaa
gatccccaggctgtcagttcagagctcattcaaaaacctcgaagaggccgaaagccatca
gcgaacccaagcaaaaggaaaagaggcaaaaccttaatggagcagattctcagcaagcca
gtgaaggtccacaaaaagcctgggccaaaacctggcatgaaagatgccattgaagtaatt
gaggcagttgtaagggcagctggatgtgaacagactgaaaaagaggagagagaaaaagaa
gatatagaaagaaggggaaaagagactgtagaaaaccaggaaacatgcatagtgggtcct
gtagtgaccgtaacagacaaacaaactgaggtcatttctgtgaaaaaaatcagacgtaaa
ccagcccatcaacattctaaattgtctttttgtccctatgtacggattaacaactccaga
gacttttcctcttggtgtgccatagtcaacaaacctgaggatgctgtggtatttcagaga
cgcagaaaaaagggcatactcagaatgaggaatcccttcacagttgcaaaggtggtgcca
cacactgctgccatgctgttgggacccatgctaaacacaagtctgatcggtaggagtctt
acatgttgcttgtgtggaaaaccagcaaattacaaagacctgggtgacttgtgtggaccc
tactacacagaggagagcattccacgcaaatttttgactgccacacatacacggtccttc
agggaagagtccaaaaagattgacgcaaatgatagtagcaccactgaagtgccagactcc
tcatcaaataatgaaggtgcaaccagctcagaaaaggagaggaatacagaagcttcctct
caggagacaaggggcagcaggcatcaccactggcgctaccgacggccagaaaggccagaa
agattgtgtcaggagggtcgtccacgaagattaactttaagagattggttcaggaaaatt
aagcagctccatactgtcagcacagaggacccaaaggaccaagagggtaatgaaagcaag
ttccaaaggctacaaatggaggcagaggctaaggaacactgggctcatgaaaattgtacc
atctggaccaagggaattattatggtatctgggaggctatatggactgaaagaggctgcc
aacaagtcagcccaaatgagctgctacaaatgccagattgtgggggcgtccctcagctgc
tgttggagaggctgctcttataaataccactatgtctgcgccaaagagataggctgcaca
ttccatgaggatgatttttccatcaaatgtccaaaacatgaggatctgtaa
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