Nematolebias whitei (Rio pearlfish): 119421777
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Entry
119421777 CDS
T08042
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
nwh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119421777 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119421777 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119421777 (mgrn1b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119421777 (mgrn1b)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119421777 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119421777
NCBI-ProteinID:
XP_037545063
LinkDB
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Position
15:complement(36057311..36065940)
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AA seq
549 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSLEDGGKPKVQYSV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPAMVSETVHYKRGVNQHFSMPAFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPSIPSAPLYDEINFSGGLGGDGRQLSSPEHLSDGSLQKSKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTRLSSSPAPTDATAAEDVAESLSPDDEDR
MHSGEDILQDCSSERCSLTKTESDPACDLSLPGSSESTESLKSQSTNCSSQPLLRPSSSL
HMEDEHFNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgtcctgagtcgcaggattgctggtgttgaggacatcgatatccaagctaac
tctgcctatcgatttccaccgaaatctgggaattactttgccagccattttttcatggga
ggagagaaatttgacacaccacatccagagggatacctctttggggaaaacatggacctg
aattttcttggaaataggccagttcagtttccgtatgtgacacctgcaccccacgaacct
gtgaaaaccctgaggagtctggtgaacatcagaaaggactctctgcgtttagtcagatat
aaagatgactctgacacatcattggaggacggagggaaaccgaaggttcagtacagcgtg
gagtttaccttcgatgctgacgcacgggtcgccatcaccctctactgccaggcgtttgag
gagttctccaatggcatggctgtgtacagtccaaaggatccagccatggtttctgaaaca
gtgcactacaagcggggggtgaaccagcatttctctatgccagccttcaaaatagacttc
agcgagtggaaagaagaagatctgaacttcgatctggaccggggagtgtttcccatggta
atccaagctgtggtcgatgaaggagacgattgtcttggacatgctcatgtgcttttggca
gcatttgaaagacatgttgatggcagtttctctgtcaagccactgaagcagaagcaaatt
gtagatcgtgtgagctacctcttacaggaaatctatgggattgagaacaaaaacaaccaa
gaaacaaagccatctgatgatgagaacagtgacaacagcaatgagtgtgtcgtctgtcta
tctgacctgcgagacacactcatcctgccctgcagacatctgtgcctctgcaactcctgc
gcagacacactgcgttaccaggccaacaactgtcccatctgcagactgccttttagagcc
ttgctgcagatcagagctgtgaggaaaaagcctggagctctttctcctgtctccttcagt
ccagttctggctcaaactatggaccacgatgagcactcaagctcagactctgttcctcct
ggttttgagcccatttcactattagaggctctgaacggtctgaggtcagtgtccccttcc
atcccctcggcccccctgtatgatgaaattaatttttccggggggttggggggtgatggc
cgacagctaagctcaccagagcatttaagtgacggaagtctgcagaaaagcaaagtcagc
aagtcacctgacagcacccttcgatccccatcctctccgatccaggaggaggatgaagag
aagctgtctgagatgtctgacgctcagccacacacacgtctctccagcagccccgccccg
accgacgcaacagcagctgaggatgtggccgagtctctttctccagatgatgaggacagg
atgcattctggagaagacatcctgcaggactgcagcagcgagcgctgcagcttgaccaaa
acagaaagcgaccctgcgtgtgatctgtccctgcctggttcctcagagtccacagaaagt
ctgaaaagtcagagcacaaactgctccagccagcctctcctgcgtccttcaagcagcctt
cacatggaggacgagcacttcaacccctga
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