Nematolebias whitei (Rio pearlfish): 119421852
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Entry
119421852 CDS
T08042
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119421852
NCBI-ProteinID:
XP_037545145
LinkDB
All DBs
Position
15:complement(41180398..41284127)
Genome browser
AA seq
2428 aa
AA seq
DB search
MTMPFSLLSSDEEHQRMLGNTRHLYPGAEDEDEDEEEEEEEMEDEQDEDGEENGELEGDE
EDDEEEMEVRREGPSRLGRGEGHRQSGKFTGRPAADRQTGRAGNPRHTTNPYSSNPGPTH
QQAANQVQPQRRPKERTANSLPSEDAHIAMMVFRIGIPDIKQTKCLRFNPDATVWKAKQQ
VLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRYKTRVYK
QTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFLDKGLDPNYQDPDTGETPLSLAVQ
CEPGGGEPIRVLVDGGAHIDFRAKDGLTSLHKAVRGHRHTALLVLLSLGASPDYKDRRGL
TPLYHTVLTGGDTSCCETLLYHRAKLGIRDENGWDETHQACQNGNSQHLEHLLFYGADSS
SQNASGNTALHICALYNKESCARILLYRGANKDMKNNSGQTPFQVAVMSGHFELGEIIKN
HRDTDVVSFVESPKYAPQRRESTRSLAVPHPHPFLRANSDSSMNLPDWMAAPNAPTTNIV
SVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPTPTPTTTTTVQIAGQ
RRRLYSAVPGRVFVATRSHSAQGEREISFNKGDRVKVLSVGEGGYWEGTVRGRTGWFPSE
CVEEVVLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFG
FVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGH
RQVVNMIRQGGNSLMVKVVMVTRNPDMEDGARKKIPQQSKRLSTPAIALRSKSMTSELEE
MVERAATPWKKKSEFEPSQVAEKKRTVYQMALNKLDEILAAAQQTISTNEASGTRGQGPK
RDRGRSFYGNEPNYGDQSGMSLMSGLGFGYDRGQYTSGHAPQHGMRRQKSIGVPEEEKQF
LHPPVMKFVRSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQSTSTS
VHYQPFSQSGHFSQGGRERAGGPGAGPSGGTMDHAASYVQAAAHTAQSRTASRKVAYTGE
PVGVGAGSGAKAAGLRRGYSTAVPPSSIATVMPQQQQPTQSQPQRAERSTAGAGGPKGGA
RRGKGPLVKQSKVEDLRLTHGTLGSKDSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEA
DVPAPGEAGEAKTPHGPPPSTPAPQPPAPPSIPAPPPPSMPSMRVQENLDYTSQFGAAIV
SAARQERERFHEARRKSASLFMSAEEDLSLGVSDEVGGMTRAQVSQQQLSTQADSSSMRL
RPSKSIDEGMFSADTFIQHTRSMPPAFGLPEYSSPALDYQPKSVPTDLYAAAGRQPAPPT
NTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFTRQMSSVVFPSSAVTS
QPLSSTAQSSSSYLVTSSSLAGTTPSVGRPPSPRILRGVGSTWSEESGGEREREGGGARE
GLRVRFSEDKTIHTHHYQSQPYQPSYRERERSRERNKEQEGYVRRAEQAAADGGSQPRRP
SFLRMESQAEAYILSLTPPSPPHTVAQQGANATGSSGTGLMVLPPPAPSVDADDEFVYAD
PLPPPLEFANSFDRGITGYTQHRRLSNNLASRQQQVPAPPPPPPPPPPPPPPPPQKEQFI
GGFAAHTPLPSPQAGDSTASSLTSYDSEVANLTQSVPSPSQTSPNPPPPSSPSNLQPTMG
PPPPPAVSPPPPPGSGSYHRPFSVSHHLYNSTHVSGRSSPTPPSHTMVPPPAYRGPPASS
STAAASVPYRITASHATTASCASMTATSATATSTSTQLYQERTHATHTAPSTAITGRTGE
HHRRPPAAKKGESQETVVDSGIEELDSRSSSDHHLDSILALTGAGIRADRLDRGERVGTG
AGGQTGGGSGETERGDFLESYMSYLDGQTFEMQNATAAASTYPKSSRFREGSRAGDLHRQ
TSTAPASYHPHRQRDEPEEDEVEEGVCVNERGQDGYSIRDLQNLGRPMSPYFDRPRTPEM
RPLWGDGPMSCDENNQSGSLLEGKKIYPPASSMKPSIINELSSKLQQRSKDTWSSQRPLS
RHRFSEDSASALSPPSARSQSPSPVSLSQPSLSPSPTPASQYPNWGRSPSPQPPASSQPP
RSHSPLSPTSYSPYPTSPKHRPVYRTKALEFQFIPSRESRKSESHLLQRRRAPSPLISQS
ERPKMAPPRPSSLPLLPTSPLYSAIYDLRGSVTPPSPGNPLGDPYFSPSPPLFAPSGAPP
PPNASLVVSRSLSPTHFLSGTSSPPLHPMPPPTCLSYPHLPPPSPTKPFASKPLPYWTKY
DVADWLAYLNLGEHRERFLDNEIDGTHLPSLTKDDYLDLGVTRVGHRMNIERALRTVLDR
LSSSPFPISVLSPRDGQTDRRRDDGSRS
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccatttagcctcctgtccagcgacgaggagcaccagaggatgctgggaaac
acgagacatctctatcctggggcagaggacgaagacgaggacgaggaagaggaggaggag
gaaatggaagatgagcaggacgaggacggggaggagaacggcgagctggagggagacgag
gaggatgatgaggaggagatggaagtcaggcgagaaggtccgtctcgtttgggcagaggt
gaaggacacaggcagtcgggtaaattcaccggacgacccgccgctgaccgacagaccggc
agggcggggaaccccagacacaccacaaacccgtactcgtccaaccccggacccacgcac
caacaagcagccaatcaggtgcagccgcagaggaggccgaaggagcgcaccgccaactcc
ctgccatctgaggacgcccacatcgccatgatggtgtttcgcatcggcatcccagacatt
aagcaaacgaaatgtttgcggttcaaccccgacgccacggtgtggaaggccaagcagcag
gtgctgtgctccctgaccgaatcgctgcgagacgtcctgaactacggtctgttccagccc
gccaccgacggacacgatgccaagttcctggaggaggagcggctgctcagagagtaccca
cagtcctttgaaaaaggggtgccatatttggagttccgttataaaaccagagtttacaag
cagacaaatctggacgagaagcaactggccaaacttcacactaaggctagtctgaagaaa
tttatggactacattcaaaccagcgctgtggacaagatggccaagttcttggacaagggt
ctagatccaaactaccaggatcctgacactggtgagactcctctgtcgctggcagtgcag
tgtgagccaggtggaggtgagcccatccgagtcctggtggatggaggggctcacattgac
ttccgtgccaaagatggactcacctcgctgcacaaggctgttcgagggcaccgccacacc
gccctgctggtcctgctctctttgggtgcgtctccagactataaggaccggcgggggctg
acgccgctctaccacactgtgctgacggggggcgacacctcctgctgtgaaactctcctc
taccaccgagccaaactgggcatcagggacgagaacggctgggacgagacgcatcaggct
tgtcagaacggcaactcgcagcatctggagcacctcctcttttacggggcagattcctcc
tcccagaatgcctctggaaacactgccttgcacatctgtgctttatacaacaaggaaagc
tgtgcacgaattttgctttatcgtggagcaaataaagacatgaagaacaacagcgggcag
acgccctttcaggttgcagttatgtccggccattttgaactgggagaaattatcaaaaac
cacagagacacagatgtggtttcattcgtggagtctccaaagtacgccccccagaggagg
gagagcacccggtccttggcagtcccccatcctcaccctttcctccgggccaacagtgac
agcagcatgaacctgccggactggatggctgcgcccaacgctccaaccaccaacatcgtt
tctgtgcagggatataaacatacaggaaccctgaggagctccagcagtcccagaggagcc
aggacacggtccccgtctcggggcaggattggagacaaggaggaccggagcagacagagc
cgcagacaggggcctacccccacccccaccaccaccaccaccgtacagattgcgggccag
cggagacgcctctacagcgccgtcccgggacgagtctttgtagcaactcggtcccactct
gctcagggagagcgggaaataagcttcaataagggagatcgggtcaaagtgctgagtgtt
ggcgagggcgggtactgggaggggacggtccgaggtcgcaccggttggttcccctctgaa
tgtgtggaggaagtggtgcttcgaagccaagacaaccgatcagagagtcgtggagaacga
gccaaaaggttgttccgtcattacaccgtcgggtcctacgacagcttcgacgctcccagt
gactatataatcaaggaaaagacggtgcttctgcagaagaaagacagcgagggattcggc
tttgtgctgagaggagccaaagctcaaactcccatcgaggagtttactcccaccccggcc
ttcccggctctgcagtacctggaatcagtggatgaggggggcgtggcctggagagctgga
ctcaggatgggggatttcctcatagaggtcaacggtcagaatgtggtgaaggttgggcac
cggcaggtcgtcaacatgatccggcaggggggcaacagcctcatggtgaaggttgtcatg
gtgacccgcaacccagacatggaggacggcgcgaggaagaaaatcccacagcagagcaag
aggctgagcactccagccatcgccctacggtccaaatcaatgacgtcagagctggaggag
atggtggagagagctgctaccccttggaaaaaaaaatcagagttcgaaccctcacaagtt
gcagagaagaagaggacagtttatcagatggctctgaataaactagatgaaattcttgca
gcagctcagcagacaatcagcaccaacgaggcttcggggacacggggacaggggccgaag
agagacaggggaagaagtttctatggcaatgagccgaactacggggatcagtctgggatg
agtttgatgtctgggttgggcttcggctatgaccgtggacagtacacgtcaggtcacgcc
ccacagcacggtatgcggcggcagaaatccatcggtgttcctgaggaggagaagcagttc
cttcatcctccagtcatgaagtttgttcgcagtctgtcggtgccaggcccagacgacatc
ccgcctcctcccactacagctccaccagatcctcccttctcttctgctcctccacttggc
tggagagcaaagtcatcccagcagccctctgtctcagtgtcccagtcaacatccacttct
gtgcactaccagcccttctcccagtccgggcacttcagccagggcggcagggagagggcg
gggggtcctggcgctggccccagtggtggaacaatggaccacgctgcgtcatacgtacag
gcagctgctcatacggctcaaagcaggactgcttcgcggaaggttgcctatactggggag
cctgttggggttggggccgggtcgggggctaaagcggcaggtcttagaagaggctacagc
acagccgtacccccatccagcattgctactgtaatgcctcagcaacaacagcccacccag
agtcagccccagcgggcagaacgcagtacagctggggcaggtggtcctaaaggaggggcc
aggagaggtaagggccccttggtaaaacaatcaaaggtagaggacctgcgcctaacccac
ggcacgctggggagcaaagactcagtggagaaaagctccattcctattcccaccatcatc
gtcaaggctccatcgaccagcagcagtgggaggagcagccagggcagcagcgtggaggct
gatgttcctgcacctggggaggcaggtgaagctaaaacgcctcatggccctcctccctcc
acgcctgctccgcagccccctgctccaccgtccatcccagcgccgccacctccatccatg
ccttccatgcgagtccaggaaaatctggactacaccagccagtttggagctgccattgtg
agcgcagctcgccaagagagggagcgattccacgaagcccgccggaagagtgcctccttg
ttcatgtctgctgaggaggatttgagtctgggggtaagtgatgaggtaggagggatgacg
agggctcaggtgtcccagcagcagctaagcacacaggccgacagttcgtcaatgcgactg
cgaccctccaagtccatcgatgagggcatgttctctgcagacaccttcatccaacacacc
cgcagcatgcctccagcctttggcctacctgagtactcctcacctgcactcgactatcag
cccaagtctgtgcctactgatctgtacgcagcggcaggcaggcagccagctccccccacc
aacaccacctttattcatcctctgacggggaaggcgcttgaccccacgtcaccactcggc
ctcgccctggctgccagagagcgcgccctgagggacgacagcaggttaaggagggggaca
gagcaccacttcacccgccaaatgtcgagcgtggtgttcccctcttctgccgtcacctct
cagcctctgtcgtccacggcgcagtcctccagctcctacctagtcacctcttcttctctg
gcaggaacgacacccagcgtcggtcgcccgccctcacccagaatcctcagaggagttggg
agtacgtggagtgaggaaagtggaggggaaagggagcgggaaggaggcggagctcgtgag
ggtcttagggttcgcttctctgaagacaaaacgatccacacacaccactatcagtcacag
ccgtatcagccaagctacagggagcgggagaggtcgagggagcggaacaaagagcaggag
ggctacgttcggcgagcggagcaggcggcggctgacgggggctctcagcctcgaagaccc
tcgttcctcaggatggagagtcaagccgaggcttacatcctgtctctcacgcccccctct
cctccacacacggttgctcagcagggggcaaacgcaaccggaagcagtgggacgggtttg
atggttcttcctccccccgccccctcggttgatgcagatgatgagttcgtctatgcagac
cccctcccaccaccgttagagtttgctaacagctttgaccgaggaataaccggatacacg
caacacaggaggctttccaacaacctggcctcacgccaacagcaagtccccgcccctcca
cctccaccaccacctcctccgccgccgccccctccgcccccacaaaaagaacagtttata
ggtggttttgctgctcatacgccactgccctctcctcaggccggggactccactgcctcg
agcctcacgtcttacgacagtgaggtggcgaacctcactcagtctgttccttcgccgtca
caaacatcgcccaatcctccacccccttcctcaccctctaacctgcagccaaccatgggc
ccccctcctcctccagcagtctcacctccacctcctcctgggtctggatcctatcacaga
cccttttctgtgtctcaccacctttacaacagcactcacgtgtctggacgatcttcaccc
acacctccctcacacacgatggtgcctccccctgcttatcgtggtcccccagcttcctcc
tccaccgctgctgcctccgtcccatacagaatcactgcctcccatgccacgaccgctagc
tgtgcttcaatgaccgccacttctgccactgcaacaagcacctccacccagctctaccag
gagcgaacacacgccacgcatacagctccctccactgccatcacaggccggacaggggag
caccaccgtcgtcctcctgctgccaaaaaaggagagtcccaggagacagtggtggactct
ggaatagaagaactggacagccgcagcagcagcgaccatcatctggacagcatcctggct
ctaactggagctggcattcgggcagacagactagaccgcggtgaaagggtgggaactgga
gctggagggcaaacgggagggggctcaggggaaacagaacgaggggatttccttgagtcc
tacatgagctacctggacggacaaacgtttgagatgcagaatgcgactgcagcagcttcc
acctaccccaaatccagtaggttcagagagggaagtcgcgctggggatctccaccgacag
acgagcaccgctcctgcatcctaccacccccacaggcagcgagacgagcccgaagaagac
gaggtagaggagggagtgtgtgtcaacgaacgtggtcaggacgggtacagcatcagggac
ctgcagaacttggggcgtcccatgtcaccgtattttgaccggccacgcacgcctgaaatg
aggcccctgtggggagacggaccgatgagctgtgatgagaacaaccagtccgggtctctg
ttggaggggaagaagatctacccccccgcatccagcatgaagcccagcatcatcaacgag
ctgagcagcaagctgcagcaaagaagcaaggacacctggagcagccagaggcctctgagc
agacacaggttttctgaggactctgcctcggctctgagccccccctcggcccgctcccag
tcaccgtctccagtctcgttgtcgcagccgtccttgtccccgtcccccacccccgcctcc
cagtaccctaactggggacggtctccgtctcctcagcctcccgcctcctcccagcctcct
cgttcacactccccgctgtctccgacgtcttattccccttaccccacttcccccaagcac
agacccgtctaccggaccaaagccctggaattccagtttattcccagtcgggagtcccgc
aaatcagagtcccacctgctccaacgcaggcgggcccccagccccctcatatcccagtca
gagagacccaagatggccccaccacgtccatcatcgcttccacttctccccacgtcgcct
ctgtacagcgctatctacgacctccgcgggtcagtcacccccccatcgcctgggaacccc
ctcggagatccgtacttctcaccctcccctcccctgttcgccccctctggcgccccccct
cctcctaacgcctctctggtcgtctctcggtcactgtctccgactcacttcctgtctggg
acgtcctctccgcccctgcaccccatgcccccccctacctgtctgagctacccccattta
ccgcccccctccccgacaaaaccgtttgcctccaagccgctgccctactggaccaagtat
gatgttgcagactggctggcgtacctgaacctgggggagcacagagaacgcttcctggac
aacgagatcgatggaacccacctgccgtctttgaccaaggacgactatttggacctgggc
gtgacgcgagtcggacaccgcatgaacatcgaacgggccttgaggactgtgctggacagg
ctgtccagcagcccgtttcccatctctgtcctctcacctcgggacggacagacggacagg
aggagggacgacggcagccggagctga
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integrated database retrieval system
