Nematolebias whitei (Rio pearlfish): 119421866
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Entry
119421866 CDS
T08042
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119421866
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119421866
Membrane trafficking [BR:
nwh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119421866
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119421866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
TolA_bind_tri
Phage_GP20
YwqH-like
Trimer_CC
Sec10_N
APG6_N
DivIC
Motif
Other DBs
NCBI-GeneID:
119421866
NCBI-ProteinID:
XP_037545157
LinkDB
All DBs
Position
15:42267949..42274878
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AA seq
451 aa
AA seq
DB search
MESQRVQSTYRKRFGPHSSSSTGARVGDLASHRLSWHGTRRTLTHSSPVSRLSVGSSNTA
LLLGSPVDRLDFSADSLLKAQYKETRTNEKMEMMGLNDRFASYIEKVRLLEQQNKVLVAE
LNQLKGKEPSHLGDIYQEELRDLRRQVDGLVNGKARLEVERDNLAADLEKLKQRLQDEVG
LRQDAESNLNVFRQDVDEAALNRVQLERKIEALQDEILFLKKVHEEELRELQEQIMAQQV
HVDLDVSKPDLTAALRDIRVQYENMATSNMQDTEEWYRSKFTDLTDAATRNADALRQAKQ
EANDYRRQVQVLTCELDALRGSNESLERQLRELEDRCAVESAGYQETVSRLEEEIQALKE
EMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFANLQFRETNLDTKTPE
AHVKRSILVRTVETRDGEIIKESTTEHRDLP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagagagtccagtccacctacaggaaacgctttgggcctcacagctccagc
agcacaggagccagagtcggggatctggcttcccaccgcctctcctggcatggcacccgt
cgaaccctcacccactccagccccgtatcccggctctctgtgggctcctccaacacggcc
ctgctgctgggcagccccgtggaccggctggacttctcggcggactccctgctgaaggcc
cagtacaaggagacgcgcaccaacgagaagatggagatgatgggcctgaacgaccgcttc
gccagctacatcgagaaggtgcgcctgctggagcagcagaacaaggttctggtggcggag
ctgaaccagctgaaggggaaggagcccagccacctgggggacatctaccaggaggagctc
cgagacctgagacggcaggtggacggactcgtcaacggcaaggcccggctggaggtggag
agggacaacctggctgcagatctggagaagctgaagcaaaggttgcaggatgaggtcggc
ctccggcaggatgcagagagcaacttgaatgtcttcagacaggatgtggacgaagcagct
ctcaatcgagtccagttggagaggaagatcgaagccctgcaggatgagatcctcttcctg
aagaaagttcacgaggaggagctgcgtgagctgcaggagcagatcatggcccagcaggtc
cacgttgatctggatgtgtccaaaccagatttaactgcagctctgagagacatcagggtc
cagtatgagaacatggccacctcaaacatgcaggacacggaggagtggtaccgctccaag
tttactgacctgacggacgcagccacccgaaacgcagacgctctgcgtcaggccaaacaa
gaggccaacgattatcgccgccaggtccaggtgctgacctgcgagctggacgctctccga
ggctcaaacgagtctctggaacgccagctccgggagctggaggaccgctgcgccgtggag
tcggcgggttaccaggagacggtgagccgcctggaggaggagatccaggccctgaaggag
gagatggctcgacacctgcaggagtaccaggatctcctcaacgtcaagctggctctggac
atcgagatagccacctacaggaagctgctggagggagaggagagcaggatcaccattcca
gttcagagctttgccaacctgcagttcagagaaactaatttggacaccaaaaccccggag
gcccacgtgaagaggagcatcctggtccgaaccgtggagaccagagatggagagatcatt
aaagaatcaaccaccgagcacagagaccttccttga
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