Nematolebias whitei (Rio pearlfish): 119421943
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Entry
119421943 CDS
T08042
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04517
IgSF CAM signaling
nwh04519
Cadherin signaling
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119421943
04519 Cadherin signaling
119421943
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119421943
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Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
PDZ_4
L27_1
Motif
Other DBs
NCBI-GeneID:
119421943
NCBI-ProteinID:
XP_037545557
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All DBs
Position
1:complement(26297017..26390448)
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AA seq
1969 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQQLKD
QGNVTSSRGSDLGDNGIPTVSHASYSDTSAASHINGKTPLEDVDQIIHSMAQGRYVTQAE
LQKPSSGGLGFSVVGLKSENRGELGIFIQEIQPGSVAHCDGRLKEADQILAINGQPLDQT
VSHQQAIGLLQSASEKVLLIVARGPIPQLTSPVVSRTPSAASTLSAHSSAWQHVETIELV
NDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLHGMGSEQVAQV
LRQCGNRVKLVVTRGPVEEPPSAVMSVVLPTVTEQQSGEEEEAEAFDVTLTKNAQGLGIT
IAGYVGDKNSEPSGIFVKSITKDSAVDQDGQIHVGDQIIAVDGVNIQGFTNQQAVEVLRH
TGQTVHLKLIQRGFRPDGVPPAGPPGVSVLSSSAIIPTTTAVMEMELERKKAEEPVEVTT
VEKHNLTTCEGSDVGPAVDQPPKDKHELKLTPFEEEELKKKWLEILGPSNEVIVAQVEKF
TESSGLGISLDANSGHHYICSVLPEGPVGRCGKLFSGDELVEVNGISLIGETHKEVIRIL
KELPVCVYMTCCRPAPDLQTNMDTVQPDSESLSTAYTLKNDIELSSVVVEDSEVNTVTAT
QDCMTEEALAAPLAMWESEIQNIELEKGEGGLGFSILDYQDPLDPTKTVIVIRSLVPNGV
AEKDGRLLPGDRLMYVNATDLENASLEDAVLALKGAKLGMVQIGVAKPLPIDTSDGDLSD
EKALLDHTYSGMEDDTFQASMMALHGSSCSVDLDFLHSSTPRLTARLDVLDLSFAASSNF
ADNTPAFSSEKSASYAAASLTGHIPAISAILSCSDQYLARQPSQEEPAERSDSYSPFSEM
GGRAAVQEANECQMESAVSFGDTGNTLKDAGVKESAGDGDKAALTPGSSFERTITVVKGN
CSLGMTVSAMKDGLGMLIRSIIHGGSISRDGRLGVGDLILAINGEPTTNLTNVQARAMLR
RHSLIGPELGSACAPEDDLCPFYVITYVPAEYLEEYKASVEQTKDDVFTESASKDISNLP
EREDGEGEESASYSNWNQPRKVELFREPGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHI
LEDSPAGQNGTLKTGDRIVEVDGVDLRDASHEEAVEAIRRAGNPVSFLVQSIIHKPRQQP
SISESNEERVAAVTKEIKDKLAKREAAKASPGGFVLPLLPHVGESDTDALADNPDRPAEA
VEEAEEEEDEFGYSWKKIIQRYGSLPGVLHVIELEKGKTGLGLSLAGNRDRACMSVFVVG
IDPNGAAGRDGQMVVGDELLEINGQVLYGHSHQNASAIIKSSPSKVKIIFIRNTEALNQM
AVGPEREHDGDAEEPHAEPKPTAADDDDSSKHAHPVVNEDGGPVDQTTESGVEIQNISEV
MGHTGKEFDQLSAVNGESVLGYVVEKSTCPDRGSSEGLSISLPSMPSTTSSTLSQLEAET
VTSLSRSSTPSTLTCDPATCPIIPGCETTIEISKGHTGLGLSIVGGCDTLLGAIIIHEVY
EEGAASKDGRLWAGDQILEVNNIDLRAASHDEAINVLRQTPQKVRLTVYRDEAQYKEEDL
WDSFTVELHKKPGQGLGLSIVGRRSRDHRSDTGVFVSDVVKGGLVDADGRLMQGDQILSV
NGEDVRSATQEAVAALLKCCVGPIKIEMGRFKAGPFHSERRFSQSSQISDTGSSKVAHLS
GLDSGSLHGDSDKLSKSPEPAEHQDIRTVELTKGPGDSLGISIAGGLGSPLGDIPIFIAM
MNPAGLAAQTQLKIGDRIVNICGTSAEGMSHSQAVSLLKSATGTIQLQVVAGGDTTVTGP
PETQEGGGLTPSCIFQDDMGPPQYKTITLDRGPDGLGFSIVGGHGSPHGDLPIYVKTVFG
KGAAAEDGRLKRGDQIIAVNGQTLESVTHEEAVGILKRTKGTVTLTVLS
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacccagcgtgccttacaggcggtggagcgtctacaggccaaa
ctaaaggagcgaggggaggtgcccaccgaggagaagctcagcctgctcaaatcagtgctt
caaagtcccctgttccaccagatcctggccttgcagaagtctgtccagcagctcaaagac
cagggtaacgtcacgtcatcgagaggtagtgacctcggtgataacggcatacccactgtg
agccatgcctcctactcagacacctcagctgcttcgcacatcaatgggaaaacaccgctg
gaggatgttgaccagattattcactctatggcacaggggcgctacgtgacacaggcggag
ctgcagaagccgtcctcaggaggccttggcttcagcgtggtgggacttaagagtgagaac
cgcggcgagctcggcatcttcattcaagaaatccagccgggaagtgttgctcactgcgac
gggaggctcaaagaggcggaccagattttagccataaacggtcagccactggatcagact
gtgagccaccagcaagccataggcctcctgcagagtgcttcagagaaggtgctgctcatt
gtggcccgagggccaatcccccagctgaccagtccagtggtgtcccgcacgccttcggct
gctagcacgctgtcggcccactccagcgcgtggcagcatgtggagacaatcgagctggtg
aacgatggcaccggtcttggttttggtattgttggaggaaaaactacaggagtcatcgtc
aaaactatcctccctggaggcatagctgatcaggatgggcgcctgcgaagtggggatcac
atcctgagaatcggggacactgacctgcacgggatgggcagcgaacaggtggcccaggtc
ctcaggcagtgtggcaacagggtgaagctggtggtcaccaggggtcctgtggaggagcct
ccctctgccgtcatgtctgtggtgctccccaccgtcaccgagcagcagagcggtgaggaa
gaggaggctgaagcattcgatgtgactctaaccaagaacgcacagggactgggaatcaca
attgctggctacgttggagataaaaactcagagccctcagggatcttcgttaagagcatc
acgaaggacagcgctgtggatcaagacggacaaattcatgttggagaccagattatagct
gtggacggtgtaaacatccagggattcaccaatcaacaggcagtggaagtgctcagacac
accggccagacggtccatcttaagctgatccaacggggctttaggcctgatggagtccct
cccgccggaccccccggtgtctctgtcttgtcctcttccgccatcatccccaccaccacc
gctgtgatggagatggagctggagaggaagaaagcagaggagcccgttgaagtcaccaca
gtggagaagcataacctgacaacatgtgaaggatcagatgtcggcccggccgtggatcag
ccaccaaaagacaaacatgagttgaagttgactccgtttgaagaggaagaactgaagaag
aagtggctggagatcctcggtcctagtaatgaagttatagtggctcaggtggagaagttc
accgagagcagcggtctgggcatcagtctagacgccaacagtggtcatcactacatctgc
tccgtccttcctgaaggacccgttggtcgctgtggcaagctgttcagtggggatgaacta
gttgaggtcaatggtatttccctgattggtgaaacccacaaagaggtgataagaatcttg
aaggaacttcccgtctgtgtctacatgacctgctgtagacctgctcctgatcttcagacc
aacatggacaccgtccaaccagattcagagtctttgtccacagcctatacattaaagaat
gatatcgagctcagcagtgtggtagttgaagactcagaggtgaacactgttactgcgaca
caggattgtatgacagaggaggcgttagcagctcctttggccatgtgggagtcggagatc
caaaatattgagctggaaaagggagaaggggggttgggattcagtattttggattaccag
gacccattagaccccaccaagacggtgatcgtgatccgctccctggttccgaacggcgtg
gcggagaaagatggcaggctgttgccaggagaccgactcatgtatgtgaacgccacagac
ctggagaacgccagcctggaggacgccgtcctggccctgaagggggccaaactgggcatg
gttcagatcggggttgccaaaccgctgcctattgacaccagtgacggggacctgtctgac
gagaaggcgctgttggatcacacctattctgggatggaggacgacacgttccaggcctcc
atgatggcgctccacggcagcagctgcagcgttgacttggatttcctgcactcgtccaca
ccaaggctgacagctcgcctcgacgtgttggacctgagcttcgcagcctcgtcgaacttt
gcagacaacactccggcgttctcttcggagaagtcggcctcttacgctgcggccagtttg
acgggtcacatcccagccattagcgccatcctaagctgctcggatcaatacttggcccgg
cagccgagccaagaagagccagcggagcgctccgactcgtacagcccattctctgagatg
ggaggcagagccgccgtccaggaggccaatgaatgtcagatggaatctgccgtttcattt
ggagatactggaaatactttgaaggacgccggcgtgaaagaatctgccggagacggcgac
aaagcggcgctgacccccgggagcagcttcgaaaggactatcacagttgtcaagggcaac
tgcagccttggcatgacagtgagtgccatgaaagatggtctgggtatgctgatccgcagt
ataatccacggggggtctattagccgtgacggacggctgggggtcggcgatctcattctg
gccatcaacggcgagcccaccaccaacctgaccaacgttcaggctcgagccatgctcagg
agacactccctcatcggaccagagctgggatctgcttgtgcacccgaggacgatctgtgc
ccgttttatgtcattacttatgtcccagctgagtatctggaggagtacaaggccagcgtg
gagcaaactaaagacgacgtcttcacagagtcagcctcaaaagatatttccaacctccct
gagcgtgaagacggagagggagaggagagcgcctcgtacagcaactggaaccagcctaga
aaagtggagcttttcagagagccgggcaaatctctggggatcagcatcgtcggaggacgg
gggatgggcagccgtctgagcaacggagaagtgatgaggggcatttttatcaaacacatc
ctggaggacagtcctgcgggacagaacgggaccctgaagactggggacaggattgtggag
gttgacggtgtcgacctgagggacgcgagtcacgaggaggctgtggaagccatacgaagg
gcagggaatccagtttccttcctggtccagagtattatccacaaacccaggcaacagccg
tcgatatccgagtccaacgaggagcgagttgcagctgtgacaaaggagatcaaagacaag
ctggcgaagcgcgaagcggccaaggcgtcccccggcggcttcgtcctcccgctgctgccc
cacgtgggagagagcgacacggacgcgcttgcagataatcccgacagacccgcagaagca
gtggaggaggcagaggaagaggaggatgagtttgggtacagctggaagaaaatcatccag
cgctatggcagtcttccaggagtcctccacgtgattgagctggagaaaggtaaaacgggc
ctggggctcagtctggcgggaaacagggaccgcgcctgcatgagcgtgttcgtggtgggg
atagaccccaacggtgccgccggcagggatggacaaatggtggtgggagatgagctgctg
gagatcaacggacaagttctgtacggccacagtcatcagaacgcctcagctataatcaag
agttctccgtctaaagtcaaaatcatctttatcaggaacacggaggcgctgaaccagatg
gctgtgggacctgagagggagcacgatggagacgcagaggagccccacgccgagccaaaa
ccaactgcagctgacgatgacgactcttcaaaacatgctcaccccgttgtaaatgaagat
ggaggacctgttgaccagaccacagagtctggagttgagatccagaatatatctgaagtg
atgggacacactggaaaggagttcgatcaactctcagctgtaaatggagaatcggtgctc
ggatacgttgttgaaaagtcaacttgtccagacagagggagctcagagggactctccatc
agccttcccagcatgccaagcacaacctccagtaccttaagtcaactagaggcagaaacc
gtcacaagtctcagccgctcgtccaccccgtccactctgacctgcgaccccgcgacctgt
cccatcatccccggctgtgagaccaccattgaaatctccaaaggccacacgggcctgggc
ctgagcatcgtgggaggctgtgacaccctgctgggggccatcatcattcatgaagtttat
gaagaaggagccgcctccaaagatggccgactgtgggcaggggaccagatcctggaggta
aacaacatcgacctgcgagcagccagccatgacgaagccatcaacgtgctgcggcagacc
ccgcagaaggttcggctcacggtctacagggacgaagctcagtacaaggaggaggatctg
tgggactccttcaccgtcgagttgcacaagaagcccggccagggtttgggtctgagcatt
gtggggagaagatcgagggatcacaggagcgacacgggggtgttcgtgtccgatgtggtg
aaaggaggcctagtggatgccgacggtcggttgatgcagggcgaccagattctgtcggtc
aacggggaagacgtgcggtcggccactcaggaggccgttgccgccttgctcaagtgctgt
gtgggaccaatcaagatcgaaatggggagatttaaggcaggccccttccactctgaaaga
aggttttctcagagcagtcagattagtgacacaggcagctccaaggtggcccatctctct
ggtttggactcgggaagtcttcatggcgattcagacaaactaagcaaaagtccggagcct
gcagagcaccaggacatcagaactgtggagctcaccaaaggtcccggtgattctctgggc
atcagtatcgcgggtggacttggcagccctctgggggatatacccatcttcatcgccatg
atgaatcctgctggcctggctgctcagacgcaactcaagattggcgaccgaatcgtcaac
atttgcggcacatcggccgaaggcatgagtcactcgcaggctgtcagtctgctcaagagc
gccacgggcacaatacagctgcaggtggtagcaggtggcgacaccaccgtgacgggtccc
cctgaaacgcaggagggcgggggtctgacgcccagctgcatcttccaggatgacatgggc
ccacctcagtacaagaccatcactcttgacagaggacccgacggactcggcttcagtatc
gtcggagggcacggcagcccccatggagacctgccgatttacgtcaaaaccgttttcgga
aagggggcggcggcagaggacgggcgtctgaaacgtggagaccagatcatcgccgttaat
ggtcagactctagaaagcgtcactcatgaagaagccgtcggcatcctgaaaaggaccaaa
ggaaccgtgacgcttaccgtgctatcctaa
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integrated database retrieval system