Nematolebias whitei (Rio pearlfish): 119421958
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Entry
119421958 CDS
T08042
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04136
Autophagy - other
nwh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119421958 (wipi1)
04136 Autophagy - other
119421958 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119421958 (wipi1)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119421958 (wipi1)
Membrane trafficking [BR:
nwh04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
119421958 (wipi1)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119421958 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
BCAS3_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WDR55
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119421958
NCBI-ProteinID:
XP_037545244
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Position
15:12148588..12226976
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AA seq
413 aa
AA seq
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MEISDGSDTADRVDGPGRRRVSCASFNQDSTSLALGTWSGYKLFSLTTGEKLDCLHDSEN
TPDVIIVERLFSSSLVVVVSALTPQCMNIYHFKKGKEICNYNYPYKILAVKLNRQRLVVC
LEESIYIHNIKDMKLLKTLLNTASNPSGLCALSTELSNSFLAYPGSVTVGEVIVYDANNL
SMVTMIPAHESALAALAFNVSTTRLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNIS
SLSFSPDGHFLCASSNTETVHVFKLGQLAEGHVPSDDAATWTAYMGKMFSAASSYLPVQV
SGMMSQDRAFATAHILSSGLKNVCTLTMIQELLRLLVVTTDGQLFLYNVDPQEGGECTLA
FMHRLIGDDDNQRRGPLTDESQVQVQSSPSYAETAALPASGPFTATLTAPTTS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggagatctctgacggttcagacaccgccgacagggtggacggaccaggacgtcggcgg
gttagctgtgcctctttcaaccaggactccacgtctctggctttgggaacctggagtggc
tacaagctgttttctttgaccacgggggagaaactggactgcctccatgacagtgaaaac
actccagatgtgatcattgtggagcgtctgttctccagcagtctggtggttgtggtgagt
gctctcactccacaatgcatgaacatctatcacttcaagaaaggaaaagagatctgcaac
tacaactacccctacaagatcctggctgtcaaactcaacagacagagactggtggtgtgc
cttgaagagtccatttatattcacaacatcaaagacatgaagctgctcaagactctgctc
aacactgcatccaacccctcaggtctctgtgctctttcgactgagctttccaactcgttc
ctggcgtaccctggcagtgtcactgttggggaggtcattgtgtatgatgccaacaatctg
agcatggtgaccatgatcccagcccatgaaagtgctctggcagctttagcctttaatgtg
tccaccaccagacttgctagtgcctcagagaggggcacggtcatccgagtcttctccatt
cctgagggtcaacgtctatttgaatttcgcagaggcatgaagaggtatgtcaatattagc
tctttatccttcagccctgatggacacttcctctgtgcttccagcaacacagaaaccgtt
catgtctttaaactgggacagctggcagaaggtcacgttccttcagatgatgctgccacc
tggacagcctacatgggaaaaatgttctcagcagccagcagctacctccctgttcaggtg
tctggcatgatgagccaggaccgagctttcgccacagctcacattctctcatctggtctg
aagaatgtttgcacccttacaatgatccaggagcttctacggttactggtagtcacaact
gatggtcagctgtttctctataatgtggatccacaggaaggaggagagtgcacattggcc
ttcatgcacaggcttattggtgatgatgataaccaaaggagaggaccactgacagatgaa
tcacaggtccaagttcagtcatctccatcttatgctgagactgccgccttaccagcctct
ggtcccttcactgcaaccctcactgcccccaccaccagctga
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