Nematolebias whitei (Rio pearlfish): 119422015
Help
Entry
119422015 CDS
T08042
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119422015 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119422015 (gspt1l)
03012 Translation factors [BR:
nwh03012
]
119422015 (gspt1l)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119422015 (gspt1l)
Translation factors [BR:
nwh03012
]
Eukaryotic type
Release factors
119422015 (gspt1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
119422015
NCBI-ProteinID:
XP_037545285
LinkDB
All DBs
Position
15:complement(5270824..5311163)
Genome browser
AA seq
574 aa
AA seq
DB search
MEQRDTAPDSWEQEDDVEATVDGQLESAFTALNVNAKPFVPNVNAAEFVPCFSVKAPSEN
VSCVADEKILTMEVSESTVPVENGDAEMTSEEPWDQKKAEPNEEEPGGMDRGPESASTEE
IVPEMMEEEEEILVPKVPPVQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDKRT
LEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHKSF
VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDP
TVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTEMCPWYTGLPFI
PHLDSLPSFNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHVVEVLS
LLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSI
ICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICL
ETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagagacactgcccctgattcctgggaacaagaggacgatgtggaggccact
gtcgacggacaacttgagtccgcatttacggctctgaacgtgaacgctaaaccgtttgtg
cccaatgtaaacgcggcggaatttgtcccatgcttctcggtgaaagcgccctcggaaaat
gtcagttgtgttgctgatgaaaaaatactgaccatggaggtgtcggaaagcactgttcct
gtggagaacggtgacgcagagatgacatcagaggagccgtgggaccagaaaaaagcagag
ccgaacgaggaggagccgggaggcatggatcggggtccggagtcggcgtcaacggaggag
attgttccagagatgatggaggaggaggaggagatactagtgccaaaggttccacctgtc
caaccagatgctcccaagaaggagcacatcaatgttgtgttcatcggacatgtagatgct
ggaaagtctaccattggaggacaaataatgtatctaacgggcatggtggacaaaagaacc
ttggagaagtacgagagagaagcaaaggagaagaacagagaaacctggtatctgtcttgg
gctttggacaccaatcaagaagagagggacaaaggcaagacggtggaagtgggccgagca
tactttgagacggacaaaaagcactttacaatcttagatgctccgggccacaaaagcttt
gttcctaacatgattggaggagcgtcacaagcagacctggctgtcctggtgatctctgcc
aggaaaggagagtttgaaactggttttgagaaaggtggacaaacgagggagcatgctatg
ctggccaaaacagccggggtcaagcacctcattgttctggtgaacaaaatggatgatccc
accgtcaactggagcctggagcggtacgaagagtgtaaagagaagcttgtgccatttttg
aaaaaagtgggcttcaacccgaagaaagatattcacttcatgccgtgctctggactaaca
ggggccaacctgaaggagcctactgagatgtgcccgtggtacacaggtctaccgttcatt
cctcacttggacagtttgccgagtttcaacagatcaagtgacggccctgtcaggttgccc
atcgtagacaaatacaaggacatggggaccgttgttctgggcaagcttgagtcgggctcc
atcagtaaggctcagcagctcgtcatgatgccaaacaggcacgtggtggaagtgttgagt
cttttatcagacgatgtggaaacggacgacgctgctcctggtgaaaacctcaagctgcgt
ctgaagggcatcgaggaggaggagatcctgcctggattcatcctgtgcaacgctgagaac
ctctgtcattcaggacgcaccttcgatgcccagattgtcatcattgaacacaaatctatc
atctgtccaggttacaacgcagttcttcacattcatacatgcattgaagaagtgcagatc
acagccttaatctgtctagtagacaagaagtcgggagagaaaagtaagacacgacctcga
tttgtcaaacaggaccaggtctgcatcgcccgtttgcgcacggcaggaaccatttgcctc
gagacctttaaagactttcctcagatgggacggtttaccttacgggatgaaggtaagacc
atcgccatcggaaaggttctgaagctggttgctgagagggactga
DBGET
integrated database retrieval system
