Nematolebias whitei (Rio pearlfish): 119422118
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Entry
119422118 CDS
T08042
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
nwh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119422118 (top3a)
03460 Fanconi anemia pathway
119422118 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119422118 (top3a)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119422118 (top3a)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119422118 (top3a)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Topoisomerases
119422118 (top3a)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119422118 (top3a)
FA (Fanconi anemia) pathway
119422118 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
119422118
NCBI-ProteinID:
XP_037545396
LinkDB
All DBs
Position
15:21454172..21491555
Genome browser
AA seq
1014 aa
AA seq
DB search
MLILHLLGRSSLRSGLTRLQQRSFWGTRSGRCPETPWWSDMIRSRTQIKRVLCVAEKNDA
AKGISEIMSSGRARRREGMSKFNKIYEFEYHLFGQNVTVTTTSVSGHLLALEFKAPFQKW
HSCNPVLLFDIEVEKYCPDNMIQIKRTLEKEVRQCQALIIWTDCDREGENIGFEIIDVCR
AVKPNLQVFRAKFSEITPNTIRRACEMLAEPDSNISDAVEVRQELDLRIGASFTRFQTLR
LQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPEIFYKIKVLHEVEEDTVEFSW
KRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRINAK
ETMKIAEKLYTQGFISYPRTETNIFPATLSLAPLVEQQTQSSEWGTFAQRVLDQPGGPNP
RQGRSSDQAHPPIHPTKYTNTLQGNEAQVYEFIVRHFLACVSQDALGQETVVDIDIAQEK
FSASGLMIIARNYLDVYPYDRWSTKLIPVFEQNSQFQPSAIEMVDGQTSPPQLLTEADLI
SLMQKHGIGTDATHADHIETIKSRLYVSLTADQRFVPGELGMGLVEGYNSMGYEMSKPNL
RAELEADLKLVSEGKKDKQSVLQLHIQKYKTVFIESVKKAKKLDEALAPYLGAAQEISEE
EQQDMEIPLPVRKCPNCGRDMVLKKKREGNSKFLTCMGYPACKTAVWFPDTVLEVNRDES
VCPTCQPSPVHMLKFKFRRGGLPPMMPLEFVGCIGGCDETLREVLDLKYLRTRGGGDDLP
ALRPPRAEPPRAPSSHPRPSLPPVPSWTLQPRPPPGGGGVCVDNSSDAIVCNCGQDALLL
TVRKDGPNQGRQFYKCNSGSCNFFLWADQPSQQGVPERREPLRPAQRTPQPMRPSQGFGN
MSRGGREQEASAAGHAMCNCNETAVTRTVQKDGPNKGRTFDTCGKPRDQQCGFFQWTDEN
VSTPGGFNAAGDRGKKGRKTAADGSANGLPAAKKPRTCSICRTPGHTRATCPQR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgctgattctgcacctcctcggaagatcctcgcttcggtcgggtctgacgcggcttcag
cagaggtccttctgggggacccggagcggccggtgcccggagacaccgtggtggtcagac
atgatccggagccggactcaaatcaagcgggtcctctgtgtggctgagaagaacgatgca
gccaaagggatctcagagatcatgtccagcggcagagccaggaggagggaaggaatgtca
aagtttaataaaatttatgagtttgagtatcatctctttggccagaatgtgacagtaaca
acgacatcagtgtcaggacatttacttgctttggagtttaaggcacctttccagaaatgg
cacagctgcaatcctgtgttgctgtttgacatagaggttgagaagtattgtccagataat
atgatacaaatcaagcgaactctggagaaggaagtgaggcaatgtcaggccctgatcatc
tggactgattgtgacagggagggggaaaacattggctttgagattatcgatgtttgcaga
gcagtgaagcccaatttgcaagtctttcgggcaaagttttctgagatcactcctaacacg
attcggagagcttgtgagatgctagcagagcctgattctaacatcagcgatgctgttgaa
gttcgccaggagctggatttacgaattggagcatccttcactcgattccagacacttcgt
ctgcagaagatcttcccagaatcccttgccaatcagctgatctcatacggcagctgtcag
tttcccactctgggctttgtggtggagcgcttcaaagccattcaggccttcattcctgag
attttctacaagatcaaagtgcttcatgaagttgaggaggacactgtggagttcagctgg
aagagaaaccgtctctttaatcacacagcttgcctggtgctctaccagatctgcatggag
gatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaaatggagacctctg
cctttggacactgtggaactggagaaactggcatctcggaagctcagaataaacgccaaa
gagaccatgaaaattgctgaaaaactttacacacaagggtttatcagctatcctcgcaca
gaaacaaacatttttcctgccaccctctcccttgcccccctggtggaacagcaaacacag
agctcagagtgggggacttttgcccagcgagtgctggaccagccggggggacccaatcca
cgacagggccgaagctctgaccaagctcaccctcccatccaccccaccaagtacaccaac
acactgcagggtaatgaagcacaagtgtatgagttcattgtccggcacttcctggcctgt
gtatcccaggatgctttggggcaggaaactgtggtggacatcgacatcgctcaagagaag
ttctccgcctctggtctcatgattattgcgaggaattatctggatgtttacccttacgac
aggtggagcacaaagctgatcccggtgttcgaacaaaactcccagtttcagccctctgcc
atcgagatggtggatggacagacaagtccaccgcagctgctcactgaagcagacctcata
tcactgatgcaaaagcacggcattggcacagatgccacgcatgcagaccacatcgagacc
atcaagagtcgtttgtatgtgagtttgacggcagaccagaggtttgttcctggagagctt
ggtatgggactagtggaaggttacaactccatgggctacgagatgtcaaaaccaaacctt
cgtgctgagctggaggccgacctcaaactggtgtcagagggcaagaaggacaaacagagt
gtactgcagcttcacatccagaaatacaagactgtcttcatcgagtctgtcaagaaggcc
aaaaagttagacgaagccctggctccatatctgggtgcagctcaagagatcagtgaagag
gaacagcaggacatggagatccctctgccggtgaggaagtgtccgaactgcggtcgggac
atggtgttgaaaaaaaagagggagggaaacagtaagtttctgacatgcatgggataccca
gcctgtaagacggccgtttggtttcctgacacggtgcttgaggtcaacagggatgaaagt
gtttgtcccacatgtcagccaagccctgttcacatgttgaagttcaagttccgcagaggt
ggccttcctcccatgatgcctctggaatttgtcggatgtattggtggttgtgatgagaca
ctcagagaggtgctggacctgaaatacctcagaacacgaggaggaggagatgaccttcca
gctctgaggcctcctagagcagagccacccagagccccaagttcccatcctcggccctct
cttcctcctgtcccttcctggaccttgcaaccaagacctcctccaggtggtggaggagtg
tgtgtcgacaacagcagtgacgcgatcgtgtgcaactgtggtcaggacgcactccttctg
actgtgcggaaagatggacccaatcagggtcgccagttctacaagtgcaactctgggagt
tgcaacttcttcctgtgggcagatcagccgagtcaacagggggtgccggagaggcgagag
cccttacggccagcacagaggacccctcagcctatgaggccatctcaggggtttggaaac
atgtccagaggtggcagagagcaagaagcgagtgcagcgggacacgcaatgtgcaactgc
aacgagactgcagtgacacgcactgtgcagaaggacgggccaaacaagggccgcacgttc
gacacctgcgggaaaccacgggatcagcagtgtggcttctttcagtggaccgatgagaac
gtatctacaccaggtggttttaatgctgctggagatagagggaagaaggggaggaagaca
gcagcagatggttcagccaacggactccccgctgctaaaaaacctcgaacctgcagcatc
tgccgcaccccgggacacacccgagccacctgtcctcagcggtga
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