Nematolebias whitei (Rio pearlfish): 119422120
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Entry
119422120 CDS
T08042
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119422120 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119422120 (rangap1a)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119422120 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
SDA1_dom
BUD22
PI3K_1B_p101
CPSF100_C
PTPRCAP
Tim54
PPP4R2
Motif
Other DBs
NCBI-GeneID:
119422120
NCBI-ProteinID:
XP_037545398
LinkDB
All DBs
Position
15:complement(21619719..21631919)
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AA seq
574 aa
AA seq
DB search
MATDIIAQLADSLAKTAVKDGELSYKGQGRKLDDAKSVEDMVKEIQDFEGLQALRLEGNT
FGVAAAQAIAKTLETKSDFKRCYWSDMFTGRLRSEIPPALNSLGDALMLASARLTVLDLS
DNAFGPDGVKGIEKLLKSVTCFTLQELRLNNCGMGIGGGKILASSLIQCHHKSSAENSPL
SLKVFVAGRNRLENEGATALAQAFQLMSSLEEVHMPQNGINHSGVTALATAMQHNPGLRI
LNLNDNTFTEKGAVAMAQALKHLRSVQVINFGDCLVRPEGAKAIAETVSEGLPILKELNL
SYGEITAEAALAVVQAVKNKDQLEKLDLNGNCLGDDGCKALKDAMEGMNMGEFLGSLSDD
EGELEEDEDEEEDEEEDDDDYEEDEEEEEELEEEEVEESSQNKLSTPTSAPRPPDVSSFL
IFPSPDKLLKLGAKRALLVQQQVDLTDPSKTAEALLKIASVYKEENSDVKHAVLDTIDGL
LNKAFSTPSFQSFSFVSSLLVLLGLIKSEDKVKPVLVVPGHLHVLEHIVRQDYFPKESVA
VLEAFVSRNSKSLESCGNARNSLQSTLHRVRYQS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacattattgcacagttggctgactctctggccaagactgctgtcaaagat
ggagagctgagttacaaaggtcaaggaagaaagctggatgatgccaagtcagtggaggac
atggtgaaggagatccaggactttgagggcttgcaggctctcagactggagggaaacacg
tttggtgtggcggcagcacaggccatcgccaagactctggagacgaagagcgacttcaag
cgctgttattggagtgacatgtttactggtcgactgcgttctgaaatccctcctgccctg
aattcactgggtgatgcactgatgctggccagtgcccgtctgactgttttagacctcagc
gacaacgcatttggtccagatggtgtaaagggcattgagaaactgctgaagagtgttacc
tgcttcacgttgcaggaacttcgtctcaataattgcggcatgggcatcggaggcggaaag
attttggcctcatcgttgattcagtgtcatcacaaatccagtgcagagaactcccccctc
agcttgaaggtgtttgttgctggaaggaatcgactggaaaatgaaggagccactgcactc
gctcaggccttccagctgatgagcagcctggaggaggttcatatgcctcagaatggcatc
aatcactcgggtgtgaccgcgctggccacagccatgcagcacaacccaggactccgaatc
ttaaacctcaacgacaacacctttactgaaaagggggctgttgccatggctcaggcgctg
aaacacctccgcagcgtccaggtgatcaactttggagactgtctagttcgaccagaaggc
gctaaagcaatcgcagaaactgtatcggagggactgcccatcctcaaggaactgaatctg
tcgtatggtgagatcacagcagaagcagctctggctgtcgtacaggcagtgaagaacaag
gaccagctggaaaaactggatctgaatggtaattgtctgggagacgacggctgcaaagct
ctgaaagatgccatggaagggatgaatatgggcgagtttctaggatcactcagtgatgat
gagggtgagcttgaggaggatgaggatgaagaggaggatgaagaggaggatgacgacgat
tatgaagaagatgaagaagaggaggaggagttggaggaagaggaagtagaggaaagcagc
cagaacaagctgtccactcctacatcagccccacgaccaccagatgtctcttcattcctc
atctttccatctcctgacaagctgctcaaactgggcgccaagagagccctgctggtgcag
cagcaggtggatttgacagatccatcaaaaactgctgaagccctcctaaagatcgcatcc
gtgtacaaggaggagaacagcgacgtcaagcacgctgtgctggacactattgatggcctt
ctgaacaaagcgttcagcactccgtcctttcagagcttcagttttgtttcgtctttgtta
gtgctgctcggactcatcaagagtgaggacaaggtcaagcccgtgctcgtggtcccgggc
cacctccacgtcttggagcacattgttcggcaggattacttccccaaggagagcgtggcg
gtgctggaggcttttgtgtcccggaacagcaagtccttagagtcgtgtggaaacgctcgg
aacagcctccagtcgacactgcacagagtccgatatcagagctga
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