Nematolebias whitei (Rio pearlfish): 119422158
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Entry
119422158 CDS
T08042
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nwh01001
]
119422158 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nwh04054
]
119422158 (ciita)
Enzymes [BR:
nwh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119422158 (ciita)
Protein kinases [BR:
nwh01001
]
Serine/threonine kinases: Other
TAF1 family
119422158 (ciita)
Pattern recognition receptors [BR:
nwh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119422158 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NPHP3_N
LRR_14
LRR_8
DUF815
AAA_16
NB-ARC
nSTAND3
AAA_22
AAA
TsaE
nSTAND6
AAA_19
RsgA_GTPase
nSTAND_NTPase5
GpP-like_1st
AAA_7
Motif
Other DBs
NCBI-GeneID:
119422158
NCBI-ProteinID:
XP_037545441
LinkDB
All DBs
Position
15:24163754..24185201
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AA seq
1195 aa
AA seq
DB search
MQEFDQDSLISDMLPENLTEFMECFDPDEFSNYFKSGCFEDIINDNETLRPLEAPTSSIH
HKEPQTVKLQKNKRKRQRTSQHTKMNPTTKRLKVTEQPVTPDANGELTITPKSVPTPTPE
PVRDLHPSPPLFQVYPSPPATSIPIQLISLPDNSGYQVVQLSSSPPPLIGLPLSNITATP
AYILANLVPATPPPCKRKVLPLSPVNGAVAPVLMSSFPPSSLSDMTSKAVSPPPSPSNKV
SPCKESPRSPTVDEIPQRVKDYIQQYKAHMAEICHDMEAGLSLHTHYVDVQVTMREIVRS
GKNTNNSLDKELIITGDVDRQKSSMEQNQIFQNLNGVKCNKRYMLLFGNAGMGKTTLIKK
LCLDWSKDCIPQFDFVFLFEGKKLTLTEPTYSLQTLLLSLSSFSPPCTDPGEVYTQILAA
PKRVLIIFDGFDELRDYKMLLQALEKDLVTSLQRDSKAQSFTVKQLFSAILQRVLLPGCT
LLLATRPRVVASQLLRRTDSLLEVCGFNPANVETYLSKYFTDPTLKASVVDRLTASSYLR
LLCWNPGLCHMVCTVLEWSKGSEVLPRTLTGLCHQVLCQKLGKDRGRTQWPGETQEALTE
ISNNSQVRKGHENNQTKSRKARQSALCSQKVRKAKGQDKQQEKVDEGNVSEDTNRKEDKE
LLSQLSSLAWEGVKSNTSIIPAGRVVSAKLKAFGLRTGLLLSQRLRTIVKRDNEEGGGHD
TNKTRRVEEGESKENGGDVDLVDDCGDGILLWANPFLQSYIAAVHLSLSRTVPDRSFLQT
LPLQTTVKGRGKPKREELELTQRFAVGLLFHNRAELERLHSYRETVFRDMLRSKQALATK
HLEDLSMSELSPAQVLEACNYVYEASFTHDGSGGSPASRMLTHLTENLPEFLTFRGVSFS
PPDVFSVQNVLEQGGAKGRTFSLDLEDSGIQICGLRSLMSLNNINTYRACIADVITLWEQ
LEQSDEEGLLQGAVSKFKIHPLKATQVCHIEHLENLVNIHMRKRLSESSSQLDSILAEGV
PAVKELCKLEFELGPENGPVALPKLWDLLPGLQNLQHLDLEKSKIGDKGADNLANALVSL
KCLEILNLSQNCIGDEGVKKLALSLRDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLT
ELDIKYNKMTDVGAQSLGASLRSCKKIKTLRMWNQCIPYGVFERLQQQDSRILWH
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtttgaccaggattcccttatctctgatatgttaccagagaatttaactgaa
ttcatggaatgttttgatccagatgagttctccaattatttcaagtctggttgttttgaa
gacatcatcaatgacaatgagactctcaggccactcgaggcccccacctcatccattcac
cacaaggagccacagacagtgaagctacagaagaataaaagaaagagacagagaacttcc
cagcacaccaaaatgaatcccacaacaaaaagactaaaagtaacagagcaaccagtcacc
cctgacgcaaacggtgaactgaccatcactccaaaatctgtgccaactccaactccagaa
ccagttagagacctccacccctccccaccactgtttcaggtctatccatccccaccggcc
acgtccattcccatccagctcatctccctcccagacaattcaggatatcaggtggtccag
ttgtcctcttctcctcctcctctcattgggcttccactctccaacatcacggctacgcca
gcgtacatcttagctaacttagttcctgccacccctccaccctgcaaacgcaaagtgctc
ccactctctccagtgaacggagctgtagcacctgttctgatgagttctttcccacccagt
tctctgtcagacatgaccagcaaagcagtgtccccacctccatcccccagtaacaaggtg
tccccctgtaaggagtcaccaaggtctcccactgtggatgaaattccacagcgtgtaaag
gattatattcagcaatacaaggcacacatggctgaaatctgccatgatatggaggcaggt
ttgagcctacatactcattacgtagatgtgcaagtgactatgagagagattgttcgatca
ggaaagaacacaaacaacagtctggacaaggaacttataatcactggagatgtagatcgc
caaaaaagctccatggaacagaatcagatcttccaaaacctaaatggagtcaagtgtaat
aaacgctacatgttgctgtttgggaatgcgggcatgggaaaaaccacgctgatcaagaag
ttgtgtcttgactggtctaaagactgcatccctcagtttgactttgtcttcttattcgag
gggaagaagctgactttaacagagcccacctatagccttcagacacttctgctcagcctt
tcctccttctctcccccctgcacagaccctggggaagtgtacactcaaatccttgcagct
cccaaacgcgtgctcattatttttgatgggtttgatgagttgcgggactataaaatgctg
ctccaggctctagagaaggacttggtgacatcactgcagagagacagcaaggcgcagagc
ttcacggtgaagcagctgttttctgccatccttcagagggtcttacttccagggtgcact
cttctactcgctacacggccaagagtcgtcgccagccagttactgcggcgcacagacagc
cttctggaggtgtgtggtttcaatccagcaaacgtggagacgtacttgtccaagtacttc
actgaccctacgctcaaggcatctgttgtggaccggctaacagccagcagctacctacga
ctcctctgctggaaccctggactctgccacatggtgtgcacagtcctagagtggtccaaa
ggttcagaggtcttaccaagaactctaactgggctctgccaccaggtgctgtgtcaaaaa
ttgggaaaagacagaggtagaacacaatggcctggtgaaacccaagaagctcttacagaa
atctcaaataattctcaagtgaggaagggtcatgaaaataatcagactaagtccagaaaa
gccaggcagagcgccctttgctcccagaaagtgagaaaggcaaaaggacaagataaacaa
caagagaaagtggacgaggggaatgtttctgaggacacaaacagaaaagaagacaaagag
ttgttgtcccaactgagctctttggcctgggagggggtcaaatccaacacctcgatcatt
cctgcaggaagagtcgtgtctgccaaactcaaggcgtttggcctgaggacagggctgctg
ctttctcagcgcctgaggacaattgtcaaaagagataatgaggagggaggaggacatgac
acaaacaagacgagaagagtggaggaaggagaaagcaaagaaaacggaggagacgttgac
ctcgttgatgactgcggtgatggcatcttattgtgggcgaaccctttccttcagagttac
atagctgccgttcatttgtctttatccaggactgtgccggaccgttccttcctccagacg
ctccctctccagacgactgtcaaaggccgtggaaaacctaaaagggaagagctcgagctc
actcaacgatttgccgtgggccttctgttccacaacagggccgaactagagaggcttcac
tcgtacagagagactgtcttcagagacatgttgcgcagcaagcaggcactggcgacaaaa
cacttggaagatctttccatgagtgaactgagtccagctcaggtcctagaggcatgcaac
tatgtctatgaagcaagttttacacatgacggtagcggaggaagccctgccagcagaatg
ttgacacatctgacagaaaatctgccagaattcctgacgtttcgtggagtttccttcagc
ccgccagatgtgttcagtgttcagaatgttcttgagcagggtggagctaaaggtagaacg
ttctctttggatctggaggactcgggtatacagatctgtggacttagatctctgatgagc
ctcaacaacatcaacacgtacagggcttgcatcgctgatgtcatcaccctttgggagcag
ctggagcagagtgatgaagaaggactccttcaaggagcggtgtccaagttcaagatccac
cctctaaaagccacacaggtctgccacattgagcatctggagaacctggtgaacattcac
atgcgcaagaggctatcagagagctcaagtcagttagattccatcctggcagagggggtc
ccagcagtcaaagagctgtgcaagctggaatttgagcttggtccagaaaacggtcccgtg
gctcttcccaagctctgggatcttttgccaggtctacaaaacctgcagcaccttgatcta
gaaaagagtaagatcggggacaaaggagcagataacttggcgaatgcgttagtctctctc
aaatgtttggagatactaaatctgtcacagaattgcataggagatgaaggagtgaagaaa
ctggctctttcactgagggacctgcccaaactgcactgtttaagtctttacagtaatgtg
atttctgacgaaggggcagagagtttggcagcagtcctcccacacatggcttctctaacc
gagctcgacattaaatataacaagatgacagatgtcggcgctcagagcttgggagccagt
ttgagaagctgtaaaaagattaagacattaaggatgtggaaccagtgtattccatatgga
gtgtttgagagacttcagcagcaggacagccgcatcctttggcattaa
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integrated database retrieval system
