Nematolebias whitei (Rio pearlfish): 119422219
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Entry
119422219 CDS
T08042
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119422219 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119422219 (gtf2f1)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119422219 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
119422219
NCBI-ProteinID:
XP_037545509
LinkDB
All DBs
Position
15:complement(27762774..27769175)
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AA seq
530 aa
AA seq
DB search
MTSLGSSSSSTTEYTVRVPKNTSKKYNIMAFNSGDRVNCSTWTQARMERDMSARRIYGEE
ETAESGAGSEFGKKQREEARRKKFGIVTREFKAEDQPWILKVNGKAGKRFKGVKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTQQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGEDDEEETDKSGKKKKKGGGKGADLLIHDLEDELEMSSDDSDSSMGDDGESKS
KTNKGTGKGKTKKKKRKGSDKEALEDSDDGDYEGLEVDYMSDESSSDEEPTNEKPTKEEE
HPKGIDEASESEEESEEEKPNEDEAKEEEEEEEGKKTPVQTEKKKKKESSGESESSDDSD
IEGETASALFMKKRTPPKRAGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAATKLEQGK
RQGAATDSPAAKRLKLEPSTQSPVPSGKSTPQTPSGKSTPSSSDVQLTEEAVRRYLIRKP
MTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctgggtagcagcagttcttcaaccaccgaatacaccgtgagagtacctaaa
aataccagcaagaaatacaatataatggcattcaattcaggggacagagttaactgttca
acctggacacaggctcgtatggagagagacatgagcgctcggcggatatatggagaggag
gagacggcagaaagtggtgcgggcagcgagtttggaaagaaacagcgtgaggaagctcgg
cggaagaagtttggtattgtgacccgtgagttcaaggcagaggaccagccgtggatttta
aaggtcaatggcaaagctggcaagaggttcaaaggggtgaagaagggtggtgtcacagaa
aatgcatcctactacattttcacacagtgtcctgacggagcttttgaggcttttcctgtt
cacgggtggtacaacttcacacaacaggcaaagcatcgaactctgacagctgaagaagct
gaagaagagtggggcaggcggaacaaggtggttaaccacttcagcatcatgcttcagagg
cgtctacgggagcaggagcgcggtgaggatgatgaagaggagacggacaaatccgggaag
aagaaaaagaaggggggtgggaaaggggccgacctgctcatccacgatctggaagacgag
ctggagatgagcagcgacgacagtgacagcagcatgggcgacgatggagaaagcaagtca
aagacaaacaaagggacagggaaaggaaaaacaaagaaaaagaagagaaagggcagtgac
aaagaggcccttgaagacagcgatgacggggactacgagggtctagaagtggattatatg
tcggatgaaagcagctccgatgaagagccaacaaacgaaaaacccaccaaagaagaggag
caccccaaggggattgacgaagcatcggagagcgaggaagagagcgaagaggagaagccg
aatgaagatgaagcaaaagaggaggaagaggaggaggaagggaagaaaacccctgttcaa
acagaaaagaagaagaaaaaagagagcagcggcgagtcggagagctcagatgacagcgac
attgagggagagacggcttctgctttatttatgaagaagcgaacgcctccaaaacgcgca
ggtggccgcggctcagcaggcagctccaggacaggaagtcgtcctgggacgccgtcaata
gactctgcctccacctccaacacgctccgcgccgctgccaccaagctggagcaagggaag
agacaaggtgctgctacggattcaccagctgccaaacggctcaagctagagcccagcact
cagagtcctgttccctctgggaagagcacacctcaaaccccatcaggcaaatccaccccc
agctcaagtgacgtgcagctgactgaggaggcggtccgccgctacctgatccgtaaaccg
atgaccaccaaagacctgctgaagaagttccagaccaagcgcacgggtttgagcagcgag
cagacggtcaacgtgctggcacagatcctgaagcgcctcaacccagagcgcaaaaacgtc
aacgacaaaatgcatttctacctcacggagtaa
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