Nematolebias whitei (Rio pearlfish): 119422299
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Entry
119422299 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119422299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119422299
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119422299
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119422299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf-UDP
zf_RING_Vps8
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
119422299
NCBI-ProteinID:
XP_037545552
LinkDB
All DBs
Position
16:9106610..9140535
Genome browser
AA seq
764 aa
AA seq
DB search
MKDLVKVCSTSLGPEGRTQETHNRATGNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIE
AAVRSSDPRGGSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGW
QWEWENDAGTWTPYDMEVAIAIESAHSRQQACLDLTPLGFCYLIDYKNMTQVNRQSQRCR
RIQRRADLTYPLVAGPLPLPKGGGVGGGGGLTGALLGVGVSGASMGVGSYVTSNGSIPVP
SLGQPCSCQQCMLVLSVKSSMGAGGVGVQTLGRRSLTVQRPKNSSAPSSKPLSPSKSATL
GRGQLQNLSYYQTLPHGLAITKNTATARQNAQLFAQSLAALTVGTSSMTVSAPSNRPPPP
SLPPPQPPSSNPPSIPPKLSSSANEPVPTATLVTPASRVTTPPSPVPSPSPMVMKPQRAP
TVCHAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITG
ILMSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFSHCCSKTTKKQARKGKTPEEVVKK
YLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSKAESVGRLAQCGHQYHFQCLVAMYN
NGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGVQGP
EHPNPAKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWN
EVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEEDALVEK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttggttaaagtttgctccacaagtctcggacctgaagggaggacgcaggag
acccacaacagggccaccgggaacaacatgctcctggcctccgcggtggtggtgtgggaa
tggctgaacgaacacgggcggtggcggccctacagccccgccgtctcccaccagatcgag
gcggccgtccggagcagcgacccccgcggagggagcgtggtcctcggccaggtggacagc
agactgtcgccctacatcatcgacctgcagtccatgcaccagttccggcaggacacagga
accatccgtccggtccggaggagcttctatgatcccgcctcggccccgggtcagggctgg
cagtgggagtgggagaacgacgccggcacgtggactccgtacgacatggaggtggccatc
gccatcgagagcgcccacagccggcagcaggcctgcctggacctgacgccgctcggcttc
tgctacctcatcgactataagaacatgacccaggtgaacagacagagccagaggtgtcgc
agaatccagcgccgtgcggacctgacctacccgctagtggccggcccgctgcctctaccc
aaaggaggtggcgtcggaggaggcggggggctaacgggagctctgctcggcgttggggtt
tcgggggccagcatgggagttgggagttatgtcacctctaatggaagtataccagttccc
agtctgggccagccctgttcctgccaacagtgcatgctggtcctgagtgtgaagtccagt
atgggagcagggggagtgggggtccagactctgggtcggcgctcattaaccgtacagcga
ccgaagaactcgtcagcccccagctccaaacctctgagtccatctaaatctgccacactg
ggccggggtcagctgcagaacctcagctactaccagacgctgccgcacggcctcgccatc
accaagaacaccgccacggcccgacagaacgcccagctcttcgcccagtcgctcgccgcc
ctcaccgttggcacctcctccatgaccgtctcggccccgtcaaacagaccacctcccccg
tccctcccgccgccgcagcccccttcctccaaccctccgtccatcccccccaaactctcg
tcctccgccaacgagccggtgccgaccgccacgttggtcacccccgccagcagagttacc
acgcctccctctccagtgccatcgccgtcgccgatggtgatgaagccgcagcgcgcgccg
acggtgtgccacgccccgttaccgcagcggtcgagcctggccgggttgagcaggccggcg
ctgcagaggatcgccatggctcagtccagagcactgattgcatccggcgttcccaccgtc
ccagtgaaaaatctgaacggatccagtccggtccatccggcgctggctgggattacagga
atcctgatgagtgctgccgctctgccagtgtgtctgacccggcctcccaaactggttctg
catcctccacccgtcagcaagagcgacattaaaccagtgccaggcttcagccactgctgc
agtaaaactaccaagaaacaggctcgaaaaggtaaaactccggaggaggtggtcaagaag
tacctgcagaaagtcaaaagtccaccagaggaggactgtaccatctgcatggagcctttg
gggggaccgtctgggtacaaaggtccaggtgtgggtccagtttcgaaggcggagtccgtg
ggtcggttagcccagtgtggacatcagtaccacttccagtgcctggtggccatgtataat
aacggcaacaaggacggcagtcttcagtgtcccacctgcaaaaccatctacggcgtgaag
acgggcaaccaaccggcagggaagatggagtaccatgtcatccctcactctctaccgggt
caccccgactgtaaaaccatccgcatcatctacaacatcccacctggggttcagggacca
gaacatccgaatccagcgaagccctttaccgccagaggcttcccgagacactgctacctc
ccagacagtgagaagggacgcaaggttctgaggctgctcctggtggcgtgggaccgcagg
ttgatcttctccgtcggcacttcgagcaccacgggagagtccgacaccgtcatctggaat
gaggtccatcataaaaccgagttcggctccaacctgacgggccacggcttccccgacccg
ggacacctggacaacgtcctggaggagctccgcgctcagggcatcaccgaggaagatgca
ctagtggaaaagtga
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