Nematolebias whitei (Rio pearlfish): 119422309
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Entry
119422309 CDS
T08042
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04517
IgSF CAM signaling
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119422309
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119422309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119422309
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119422309
Intermediate filaments
Intermediate filament-binding proteins
119422309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PMC2NT
Motif
Other DBs
NCBI-GeneID:
119422309
NCBI-ProteinID:
XP_037545576
LinkDB
All DBs
Position
16:9804814..9839735
Genome browser
AA seq
2336 aa
AA seq
DB search
MMTTVAAEFDHMELQQQYSSSDTVNKRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTSSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDQPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETKKMIEKYESLASDLLEWIEQTIIILNNRKFSNSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYKERV
QAVVAVAKELEAEHYHDIKRIAARKDNVIRLWEYLLELLKARRQRLDMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVKTVVTNANKHSVCD
SGYKPCDPQVIQDRVAHLDFCYQELTQLAAERRARLEESRQLWKFFWEMAEEEGWIREKE
QILSSLEHGKDLTGATRLLSQQRALEDEMSGRAGHLQHTIAEGQAMIQAGHFGAAKIQER
IADLQAQWVALEQLVAMRKRSLEEVLALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TLALVRKHKDTATEVASYRSVIDSLHEQVAALPTEKAESEEVHDRLAGIEERYKEVSELT
KLRKQALQDALALYKMFSEVNACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NSQASRVAVVNQIARQLVHSEHPSQKDIKSQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRGE
AQRLSEEHPDQAQAITGRLAEINAVWKEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTRQAEAFLNNQEYVLAHTEML
TTLEGAEAAIKKQEDFMTTMDANEDKINAVVEAGRRLASDGNVNADRIQERVSSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWVSEKMLTAQDLTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGKLLVSEKPETEEVVKEKLSLLHSMWEQLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQLLENQVEVRQREVVE
LQSHVKALGQEVKDTDEVDGRRQVVEKKFQELLDPLRRRRNFLVASREVHQFNRDIEDEI
LWAQERMPVATSSDYGHNLQTVQLLIKKNQTVQKEIQGHQPRITDILERSQSLLQDESSN
SDGIHQRLSDLQQLWKQLMEEVERRNERLQEAHKAQQYYFDAAEAEAWMSEQELFMMSEE
KAKDEQSAVNMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSKVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDTVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILARIADKQKKLPDEMGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRSLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALLA
RKHFASPEIKDKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKRRK
PPSPEPAEVQQQQSACTQNGLALDQNSPQDALEGDDLVNGFAEPSSKEPSPTPSPTSGRK
TKSQSSTLPAKNQDLTSLLEGFLHRKHEWGGHNKKASNRSWHNVYCVIRNQEVSFYKDNK
AAGQGVAYHGEPPVSLKDATCDVASNYKKKKHVFKLRVPDGNEYLFQAKDEEEMSSWIQT
VLTAATDHSHTEGSDPGTPASGRAQTLPATVTLGAESSPGKRDKEKRFSLFSKKKQ
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacagtggcggcggagttcgaccacatggagctgcagcagcagtacagcagc
agcgacacggtcaacaagcgctgggacgacgactgggacaacgagaacagctcggcccgg
ctctttgagaggtcgcgcatcaaggcgctcgcagatgaacgagaggcagttcagaagaag
accttcaccaagtgggtcaactcccacctatccagggtctcctgcagaatcacagacctc
tacatggacctgagagatggacggatgctcatcaaactgctagaagttctctccggggag
aagctgcccaagcccaccaaaggtcggatgcggatccactgcctggagaatgtggacaaa
gctttgcaattcctcaaagagcagcgggttcacctggagaacatgggctcccacgacatt
gtggacgggaatcatcgcctgactctgggtctgatctggaccatcatcctacgattccag
attcaggacatcagtgtggagactgaagacaacaaggagaagcgttcggccaaagacgct
ctgctgctctggtgtcagatgaagactgccgggtactcaaacgtcaatatccataacttc
accagcagctggagggatgggatggccttcaatgctctcattcacaaacacagacctgat
ttgattgactttgataaactgaagaagtctaacgctcactacaaccttcagaatgccttt
aacctggcagagcagcacctaggcctgaccaagctgctcgatccagaagacatcagcgtg
gaccagcccgatgaaaaatccgtcatcacctacgtggtgacctattatcactacttctct
aaaatgaaggctctgaaggtagagggcaaacggatcggaaaggtcctggacaacgccatc
gagacaaagaagatgatcgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaataacaggaagttctccaactctctggtgggggtccag
cagcaactgcaggctttcaacacctaccggactgtggagaaacctccaaagtttacagag
aaggggaacctggaggtcctgctcttcaccatccagagtaagatgagagccaacaaccag
aaggtctacatgcctcgtgaaggaaaactcatctctgacatcaacaaggcatgggagcgt
ctggagaaggcagagcatgaaagggagctggccctgaggacggagctcatccgtcaggag
aagctggagcagctggccaggcgctttgacaggaaggcagcaatgagggagacctggctc
agtgagaaccagaggctggtatcccaggacaactttggctttgacctccaggctgtggag
gcggccaccaagaaacacgaggccattgagacagacattgcagcatacaaggagcgggtc
caggctgtggtcgccgtggcaaaggagctggaggcagagcattaccatgacatcaaacgc
attgcagccaggaaggacaacgtgatccgattatgggagtacctgctggagctgcttaag
gcacgcagacagagactggacatgaacctgggtctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaagactatggaaaa
catttgctgggggtggaggatctgctgcagaaacatgccctggtagaggccgacatctcc
attcaggcagaccgggttaagaccgtggtcaccaacgccaacaagcactcggtctgcgac
agcggctacaagccctgcgacccgcaggtcatccaggaccgggtcgcccacctggatttc
tgctaccaggagctgacccagctggctgccgagcgtcgtgcccgcctggaggagtctcgc
cagctctggaaattcttctgggagatggcagaggaggagggctggatcagagagaaggag
cagattctgtcctccctggagcacggtaaggatctgacgggtgcaacgcgcctcctgagc
cagcaacgcgccctggaggatgagatgagcgggcgagctggacacctgcagcacacgata
gccgagggtcaggctatgattcaggcgggtcacttcggtgcagctaagattcaggagcgc
atcgcagatctgcaggctcagtgggttgcactcgagcagcttgtcgccatgaggaaaagg
agtctggaggaggttctggccctgcatcagttccaagccgacgcagacgatgttgacgcc
tggacactggacgcactgcgcatcgtctccagcggtgagacgggccacgacgagttttcc
accctggccctggtcaggaaacacaaggacactgctacagaggtggccagctatcgctca
gtcatcgactcgcttcatgaacaggtagcggcactacctacggagaaggcagagtctgag
gaggtgcacgaccggctggctggcatcgaggaacgctacaaggaggtgtcagagctgaca
aagttgaggaagcaggccctgcaggacgcgctggcgctctacaaaatgttcagcgaggtc
aacgcctgtgaggtttggattgatgagaaggagcagtggctgaacagcatggagatccct
gaaaaactggaagaccttgaggtcatacagcacaggtttgaaagtctggagccagagatg
aacagccaggcatctcgtgttgctgtggtgaaccagattgctcgacagctggtccacagt
gaacatccgagccagaaggacattaagtctcagcaggacaaactcaacaacaggtggagt
cagttccgagacctagtggaccaaaagaaggagtccctgaactcagctctgggtgtgcag
aactaccaccttgactgcaacgagaccaaatcctggatcaaagaaaaaaccaaagtcatc
gaatccacccaggaactgggcaacgacctgaccggagtcatggctctgcagcgcaaactg
accggtatggagcgggacctggtagccattgaggacaagctgggggacctgcgtggcgag
gcccagcggctgtcagaggagcacccagaccaggcccaggccattacaggacgcctggct
gagatcaatgccgtctggaaggagatgaagaacactctgaagacccgagaagagtcgctg
ggagaggcccggaagcttcagcagttcctgcgagagctagatgacttccagtcctggctt
tcccgtacacagactgccatcgcctccgaggacatgcccaacacgctggccgaggctgag
aagctgatggcccagcacgaaggcatcaagaatgaaatccagaactacgaggaggactac
cagaagatgcgagacatgggagaaatggtgacgcagggtcagacagatgcgcagtacatg
ttcctgcgtcagcggctgcaggcgcttgacacaggctggaacgagctgcataagatgtgg
gagaaccggcagaacctgctgtcccagtcccatgcttaccagttgttcctgagggacacc
aggcaagctgaagcctttctcaacaaccaggagtacgttctggctcacacagagatgctc
accactctggagggtgctgaggctgccatcaagaagcaagaggactttatgaccaccatg
gatgccaatgaggataagatcaacgcagtggtggaggcgggtcgtcggctggcgtctgat
gggaacgtcaacgccgatcgtatccaggagagggtctcctccatcgacgacaggcacaag
aagaacagggaggctgctgttgagctgctgatgagactgaaggacaatagagacctgcag
aagttcctgcaggactgtcaggagctgtctctgtgggtcagtgagaagatgttgacagcg
caggacctgacctatgatgaggccaggaacctgcacagcaagtggctgaaacaccaggcc
ttcatggccgaactgcagtccaataaggagtggctggacaagatccagaaggacgggaag
ctgctggtgtcagagaagccggagacggaggaggtggtgaaggagaagctgtcattgctc
cacagcatgtgggagcagctggagtccaccactcagaccaaagcccaatgtctgtttgat
gctaacaaggccgagctgttcacgcagagctgcgctgacctggacaagtggctgggcggc
ctggagggccagatccaatctgacgactacggcaaagacctgacgtccgtcaacatactg
ctgaagaaacagcagttgttggagaaccaggtagaggtgcgtcagagggaggtggtggaa
ctgcagagccatgtgaaggcccttggtcaagaggtgaaggacactgatgaggtggacggg
cggaggcaggtggtggagaagaagttccaagagttgctggatccactgcggcgccgcaga
aacttcttggtggcgtccagagaggttcaccagttcaaccgagacattgaggatgaaatc
ctctgggcccaggagaggatgcctgtggccacatcttctgactacggccacaacctgcaa
acggttcaactgctgatcaagaagaaccagacggtgcagaaggaaattcagggtcatcag
cctcgtatcaccgacattctagagcgcagtcagagtcttctgcaggacgagtcctccaac
agcgatgggatccatcagcgtctgtcagacctgcagcagctgtggaaacagttgatggag
gaagttgagcggcgcaatgaacggctacaggaggcccacaaagcccagcagtactacttt
gatgctgccgaggctgaggcctggatgagcgaacaggagctcttcatgatgtcagaggag
aaagccaaggatgagcagagtgccgtcaacatgctgaagaagcatcagatcatggagcag
gcggtcgaggactatgccgagactgtccaccagctgtctaaaaccagccgaggacttgtg
gccgatggacacccagagagtgaacggatcagtatgcggcaatccaaggtggataagctg
tacgccggcctgaaggacctatccgaggagaggcggggtaaactggatgagaggctccgc
ctcttccagctcaatcgggaggtggacgacctggagcaatggattgctgagcgagaggtg
gttgctgggtctcacgagctgggtcaggactacgaacatgtcactatgctgcaggagaga
ttccgggagtttgcgcgggacactgggaacattgggcaggagcgtgtagacaccgtcaat
cggctggcagatgaacttatcaacgccgggcacggtgatgcagccacagtggccgagtgg
aaagacggtctgaacgaggcctgggccgacttgctggaactcatcgacaccagaactcag
atcctcgctgcctccttcgagctccataagttctaccacgatgccaaagagatcctggca
cgcatcgcggacaagcagaagaagctgccagatgagatgggccgggaccagaacacggtg
gagacattgcaaaggatgcacaccacctttgaacatgacatccaggcactcggaacacag
gtgaggcagcttcaggaggatgccgttcgcctgcagtcagcgtacgccggagataaggca
gatgacatccagcgccgggaaagcgaagtgttggaggcctggaggagcctgctggaggcc
tgcgatgggcgcagggtccgcctcctggacaccggggacaagttccgcttcttcagcatg
gtccgggacctcatgctctggatggaggacgtgatccggctcatcgaggcccaggaaaaa
ccccgagatgtttcttctgtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgatgcccgtaacgacagcttcaccacctgcattgagttgggcaaagctctgctggcc
aggaaacactttgcttctccagagattaaagacaagctgctgcagctgacggacaaaagg
aaggagatgatcgataagtgggaggaccgatgggagtggctccgcctcatcctggaggtg
caccagttctcgagggatgccggcgtggccgaggcctggctcctgggccaggagccgtac
ctgtccagcagggagatggggcaaagtgtggacgaggtggagaagctcatcaaacgccac
gaagcttttgagaagtctgccgccacctgggaagaacgcttctctgccctggagaggctg
accacgctggagcttctggaggtccggaggcaacaggaggaggaggagaagaggaggaaa
ccaccgtctcctgaaccagctgaggtccagcagcagcagagcgcctgcactcaaaacgga
ctcgcactggatcagaactctcctcaggacgcactggaaggtgacgatctggtgaacggc
ttcgctgagcccagctccaaggagccaagccccaccccctcaccaacatctggcaggaag
actaagagccagtcgtctacactgcccgccaagaaccaggacctgacctcgcttcttgaa
ggcttcctgcatcgtaaacatgagtggggaggtcacaacaaaaaggcctccaacaggtca
tggcacaacgtgtactgcgtcatcaggaaccaggaagtgagcttctacaaggacaacaag
gcagctggacagggcgtggcttatcatggcgagccacccgtcagcctgaaggatgccacc
tgtgatgtggcgtccaactacaagaagaagaaacacgtcttcaaactcagagtcccggat
ggaaacgagtatctgttccaagccaaagatgaagaggagatgagctcctggatccagacc
gtcctcaccgccgccacagaccactcccacacggagggcagcgaccccggcacgccggcc
tccgggcgcgctcagacgctgcccgctaccgtcacgctcggcgccgagtccagtcccggc
aagagagacaaagagaaacgcttcagcctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
