Nematolebias whitei (Rio pearlfish): 119422323
Help
Entry
119422323 CDS
T08042
Symbol
tsc2
Name
(RefSeq) tuberin
KO
K07207
tuberous sclerosis 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04115
p53 signaling pathway
nwh04140
Autophagy - animal
nwh04150
mTOR signaling pathway
nwh04218
Cellular senescence
nwh04910
Insulin signaling pathway
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119422323 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119422323 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
119422323 (tsc2)
04218 Cellular senescence
119422323 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
119422323 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119422323 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119422323 (tsc2)
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119422323 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
119422323
NCBI-ProteinID:
XP_037545598
LinkDB
All DBs
Position
16:complement(11661986..11695557)
Genome browser
AA seq
1865 aa
AA seq
DB search
MNKQQNKASLKDKVKGIFGIASPQTPIRPCDPKLPEFIITTEIIKDLHPDNGLNNRMRVI
SQICDLAKMKKFEENAVEAVWKAVEDMLTPEQPPEARHAVLQLLRAIIQGQGEWLGPLRA
YFFKVIGDYQPCNEDLSERLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSIMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSESLTIFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERMYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIEQLLQQIQTIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIQSLHRLMEKFFKNETRSVIRIKVLHILSFVLSTNRQLY
EDELIEMVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTPHFTSLLDIIERVASRSLV
CSGALEVSERDLTAESPMEDVKTAVLGLLEILQSKLYSLPASHASRVYELLISHLQLHYK
NKYCSTIASAIRLQVFDFFLMMRADSLHRIGVPNKNGVMRFSPYCYCDTGEPEKRVCEKK
PTGSTSPPAGSPAPPAAPPASTASIRSAYLPYAPAFSVLLQCLKMETDWKVLKLVLDKLP
WMLQFKVLLLTSPCSLDQLCSTLCLMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTAIT
SYHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHIS
ATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIA
MWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSPFRARSTSLNERPKSLRAVKVSK
AAPVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMHTSTTTCSLGSADENAVTQAD
EGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTS
GGVRTQALLGLDMSERLGGGGEMTRSDPSLHTRITKEAPATLESQSSQQHNRSTRIRVRS
MSGGHALRGGPTQSLSPLVSPSEGELAPPLSPSSGPGLNSVGPPSSTSTAPSAPPPLKDN
PSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSSVLMAMEG
VKEPPAETSSAPASTAAPAPTSVSEPLNQTQSSVGGKSNLIQRSNTDSVVMLEEGSGVTT
PHTPLEWVEGEEFEPMPSEPIFMAPDKTPPPGTLSRSSSTSSQDDEKSTLEEVSEGAIPI
DQPTPGPSTPGSQGPELPFQSHSQSQGHGLNKSSSSPELQTLPEAFAKANLESESVQGDS
SRPRAPSDGKPPAQQLQFEKDKVKGSTGVDVNGLGRQNQAGDGSGPTPQSGGLRLSFPAA
PTHSGPISPSGGHRPRGHTISVSAPSSRRERRTERDSYHNRPGPSNTEKMSGLSPSFVFL
QLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVSNEVAILS
NEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFHIAT
LMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEEYKLGTIKGQFNFVEVVIKPLDYECNLV
SLQCRKDLEGLVDTTVAKIVSDRNLPLLVRQMALHANMASLVHQYRANPSDAYASKWLAR
LRHIKRIRTRAQEDIQSRLAPGISLTQGHPQQSKSFQQNAAAANPEASGQRKRLVSTVDD
FTDFV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaacaaaataaggcatctctgaaggacaaggtgaaggggatctttggaatc
gcttctccccagacaccgatcagaccgtgcgaccccaagctgccagagttcattataact
actgaaattattaaggatctccacccagataacggcctgaacaaccggatgcgagtcatc
agccaaatttgcgatcttgcaaaaatgaaaaaatttgaggagaatgccgtggaggctgtg
tggaaagctgtggaggacatgctaactccagagcagccgccagaagctagacacgctgtc
ctgcagctccttagggccattatacagggacagggtgagtggctcgggcctttgagggct
tactttttcaaggtgatcggagactaccaaccatgcaacgaggacctttcagaaagactg
gaagtgttcaaggctttaactgaaaacgggaaggacatcacgtacctggaggaggacata
gcacgttttgttctcctgtggatggacattggtcttacctctgacttcctccatgttctt
gtgaatctggtaaagttcaacagctgctacctggatcaaaacgtgtccatcatggtccag
aaaatctgtctgctgtgcaacagaacaacatcgtctacagacatagaggtggctcttcag
gtcttggatgctgttgtgtgctacaactgccttccctcagagtccctcacaatttttatt
ataacactctgccgtacggttaacgtaaaggagttttgtgaatcctgctggaagttgatg
aggaaggttttgggaactcatctcggccacagtgctatttacaccatgtgccgcatcatg
gaggagagaatgtacatggaggatgccccactgctgagaggagcggtattcttcgttgga
atggcactgtggggtgcacacagactccctgccctgaaaaacacaccaacgcttgttctg
ccgtctttctataaggctatgtcgtgtgccaacgaggtagtgtcctatgaaatcgtcctc
tccatcaccagactgattaagaagtacggcaaagagctgcaggtggtcacatgggacatc
ctgctgggcatcatagagcaactgctgcagcagatccagacgataggcagcgcagagctg
aaggccattgtctatgaactcttgactacggttgaagagctgtacgagcagaacggttac
cacggctccacagagaagttcttcagtttggtggaaaaatgtgccgacaagagacctgat
gcatccgtgctgaccctcatctcataccgagcgcagtcgatccagccggccaaggacggc
tggatccagagccttcaccgcctcatggagaaattctttaagaacgagactcgcagcgtg
atacggatcaaagtgcttcatatcctgtccttcgttctcagcaccaaccgacagctttat
gaggatgagctgattgaaatggttgtgatccctcagctcagtgggatagctgaagaccgg
gatctggctgtcagaaaacaggccacccagcttctggtggacctcgctgagggttgtaac
actcctcacttcaccagcctcctggacatcattgagcgagtggccagtcgttctctggtt
tgttcaggggccctggaggtttctgagagagacctcacagctgagtctcctatggaggat
gtcaagactgctgtactgggtctgctggaaatcctgcagagcaaactttacagcctccca
gccagccatgcaagtcgcgtctatgagctgcttatcagccacctgcagctccactacaag
aacaaatactgttcaaccatcgcttctgccattagactacaggtgtttgacttcttcctg
atgatgcgtgccgactcgctgcaccgcatcggcgttcccaacaagaacggagtgatgcga
ttcagtccgtactgctactgtgacacgggggaaccagagaagcgcgtttgtgaaaagaag
ccgacaggttcgacatctcctcctgctggtagtcctgctcctcctgctgctcctccagct
tcaacagcctccatacgctccgcttacctcccctatgctcctgccttcagcgtcctgctg
cagtgcctcaaaatggagacagattggaaggtgctgaaacttgttctcgacaagctgcct
tggatgctgcagttcaaagtcctgctgctcacgtctccgtgcagtttggaccagctctgt
tccactctgtgtcttatggtgacggatcgtttgatctctgagcgcttgaaaaagacccca
gagggcttttcccgcacagatgttcagctggctgtagttcctgttctgacagccataaca
tcttaccacaactacttggagcaatcaagacagagagaactggttcagtgccttgagact
ggcctcatttatcgatgtgccaaacagtgtgtggtggctcttacaatgtgcacggtggag
atgcctgatatcatgatcaagctcctccctgcgctcatcgtcaagcttacccacatctct
gccaccgttgccatggcatctcccatgcttgaattcctctctactctggtgcgtttgccc
catctgtacgccaactttgtagctgagcagtatgttagtgtgtttgccatctcgctgccc
tacaccaacccctccaagttcaaccagtacattgtgtctctggcccaccatgtgatcgcc
atgtggttcatacgctgcagacttcccttccgcaaggactttgttcagtacatcacaaag
ggtttgcggtccaacgccctgctgcccttcgacgacggccacgagcagagtccatttcgt
gctcgcagtacgagcctcaatgagaggcccaaaagtctgcgagctgtgaaagtgtcaaag
gcagctcctgtagccaatagcagcagctctccagttaaagagctgagggacctgtcagcc
atggatgctttccgctcccgcagcatcagcgtctccgaacatgcggttcgcaggatgcac
acgtcaaccacaacctgcagtttgggctctgccgatgaaaatgctgtaactcaggcagat
gaggggctcaagactgtccacctggagctcactgagacctgtctagatatgatggcacga
tacgtgttctccaacttctctgcactgcccaagaggtctcccattgcagagtttctctta
gccggaggtcgcagtatgacctggttggttggcaacaagctggtgaccataacaaccagt
ggaggcgtaagaacacaagcattgctcgggctggacatgtctgaacgtctgggaggaggc
ggggaaatgaccaggtcagatccgtcactacacacacgaatcaccaaagaggctccagcc
actctggagtcacagtccagtcagcaacacaacagatcgactcggatacgggtccgctca
atgtcagggggtcacgctctacgtggtggtcctacccagagtcttagtcctctggtctcc
ccctcagagggtgagctagctcctcctctttctccctcctcgggccctggtctgaatagt
gtcggtcctccctcgtccacctccaccgccccatctgctcctcctcctctcaaagataac
cccagcctggctgagtttgtccccatgctcactcagggttgggcagaaatcttcatacgg
agaccttcaggtaacaccagctggctgatgtgtttggagaacccgcccagtcccttttcc
tccgagctcggcaacatgccgctgcaggagctgtccagcgtcctgatggcgatggaggga
gtaaaggagcctcctgctgagacttccagcgctccagccagcaccgccgccccggcaccc
acatccgtctctgaacccttaaaccaaacgcagagcagcgttggagggaagtcgaacctg
attcagcgctccaacaccgactctgtggtgatgctggaagaggggtcaggggtcaccaca
cctcacaccccactggagtgggtggagggggaagagtttgagcccatgccctctgagccc
atattcatggctcctgacaagacgcctcctcctggaacactcagcaggtcatcctccacc
tccagtcaagacgatgaaaagtcgactctggaggaggtgagtgaaggagcgattcccatt
gatcagcccactccaggtccctccacccccggcagccaggggcctgaacttccatttcag
agccactctcagtcccagggtcacggactcaacaagtccagctcctctccagagctccag
acgctgcctgaggccttcgccaaagctaatctggagtctgagagcgtgcagggagactcc
tctcggcccagagcgccctcggatggcaaacctccggcgcagcagcttcagtttgaaaag
gacaaagtgaaagggagcacaggagtggacgtgaatggtttgggacgtcagaaccaagca
ggagacggatccggtccaacacctcaaagcggagggttgaggctgtcttttccagcagca
ccgacacattctggacccatctctcccagcggaggccaccgaccccgaggtcacaccatt
tctgtttcagcaccgtcctccaggagagaacggaggacggagagggactcgtatcacaat
cgacctggaccaagcaacacagagaaaatgtctggactgagccccagttttgtgttcctc
cagctgtaccactctcctttctttgggaatgaggccaacaaaccgttgctgctgcctaaa
actcaggtgatcgaccgagctgtgaaggttttggaccagatgcctccttatgacacccat
aagattggagttgtgtttgttggtgcgggtcaggtgagcaacgaggtcgccatcctgtcc
aacgaatacggctcgaaccgctacgccgcctttctgacgggcctgggaaagttaatccac
ctgaaggactgtgaccctgaccagatctttcttggagggctcgaccagtatggagatgat
ggggagttcacctactgctggcacgacgacatcatgcaggccatcttccacatagctaca
ctgatgccaaacagagagagcgacaaaggctgctgcaacaaaaagcgacacattggcaac
gattttgtcatggtggtatataatgactcaggagaggagtacaaactgggcacgataaag
ggtcagtttaattttgtagaagtcgttattaaaccactggactatgaatgtaacctcgtt
tctcttcagtgccgcaaagatctcgagggtttggtcgacacaacggtggcaaaaatagtt
tcagatcgcaaccttccacttttagttcgacagatggccctgcatgcaaacatggcctct
ttggtgcaccagtacagagctaatccctccgatgcgtatgcttccaagtggctcgcaaga
ttacgacacataaagaggatcagaaccagagctcaagaagacatccagtcccgcttggct
cctggaatctctttgacccaaggacaccctcagcagagcaagtcgtttcagcaaaacgca
gcagcagcaaatcccgaggcctccgggcagaggaagagactcgtctcaacagtggatgat
ttcactgattttgtttga
DBGET
integrated database retrieval system