Nematolebias whitei (Rio pearlfish): 119422342
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Entry
119422342 CDS
T08042
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
nwh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
nwh01100
Metabolic pathways
Module
nwh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119422342 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
119422342 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nwh01003
]
119422342 (xylt1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
119422342 (xylt1)
Glycosyltransferases [BR:
nwh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
119422342 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
119422342
NCBI-ProteinID:
XP_037545626
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All DBs
Position
16:13709920..13842355
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AA seq
946 aa
AA seq
DB search
MVGGPCARRLARRSRSALIAALTVLLVQTLIVWNFSTLDSAEEREKAGSSSSSVREKRDR
VAGNNKAAGSDSFQRGVQRQHLPPPGRGASRHIQQPDGYYSHRPKEKSKVDSNIENSVPK
DFENIDNSNFGARSQPHRQSIGATSNKQRERLQAHAQQQAWHDNSHRPGRSSNEVLSVGH
QSLAVSNNTSYPGGQGILGGQQQHHRTSQAQPAQPQHRHQHPHRKQATPATLEVTYDEPP
KCEISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPDAVTRYCPIEGKANVNIQWDE
DSAESVSSKPVRIAFVLVIHGRASRQFQRLFKAIYHISHYYYIHVDQRSNYLHRQAQVLA
SHYPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWNWDFFINLSAADYPIRTNNQL
VAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRRIPEGVSVDGGSDW
FLLNRMFVEYVINSKDDLVTNMKQFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNW
NRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDAY
LFGPFPQGAPGLNSYWENVYDEPDGVASLSDTQLTFYHSFSRLGLGRAAASLQGNPNDHS
CRYFPMGHPVSVHLYFHFDQFQGYLVQHHATNLATSKLELMETWVAPKKNFRLTTPPSST
FSRLQFAEIGTEWDAKERMFRNIGGLMGPMDEAVGMQKWNKGPNVTVTIVWIDPTNVIAA
TYDILIDASAEFTHYRPPLNQPLRPGVWSVRILHNWSPVAEIRFLITPLAYNKHQPIRQK
DTLKLHNGPLKNSYMEQSFHGLNPVLNIPVSLAYVEQAKRNAALSGPELERWVDGLVGEL
WEAADVCAVGPTACPVMQACTKSPWSSMSPDPKSQLGAPRADGRIR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggcccgtgcgcacgcaggctggcccgccgctcgcgctccgccctgatcgca
gccctcacggtgctgctggtccagactctgatcgtgtggaacttcagcaccctcgactcg
gccgaggaacgagagaaggcgggctccagctccagcagcgtgcgcgagaagagggaccgg
gtcgcgggcaacaacaaagccgccggcagcgactctttccagcgcggcgtccagcggcag
catcttcctccgccggggaggggggcgtctcgccacatccagcagccggatggatattac
tcccaccgaccgaaggagaaaagtaaagtcgacagcaacattgagaactctgtgcccaaa
gactttgaaaatatagacaatagcaactttggtgcacgttctcagccacaccgccagtct
ataggagccaccagcaacaagcagcgggagcgtctgcaggcccacgcccagcagcaggct
tggcacgacaactcccacagaccgggccgcagctccaacgaagttctgtctgtaggccac
cagtcactggcagttagcaacaacacttcctatcctggtggtcagggcatcctgggaggt
cagcagcagcaccaccggacctctcaagcccagcctgcccaaccacagcaccgacatcag
cacccccacaggaagcaggcaactccagcgacgctggaggtgacgtacgatgagcctccc
aaatgtgagatcagtggcaaggaagccatatcagccctgtccagggcaaagagcaaagag
tgccggcagcagattgctgaggtgtactgcagacacaaggagggccagttaatgcctgac
gcagttactcgttactgccccattgaaggtaaagcgaacgtgaacatccagtgggatgaa
gactctgctgagagcgtttcatcgaaaccggtgaggatagcgttcgtccttgtgatccac
ggacgagcctctcgccagttccaacgcctcttcaaagccatctaccacatctcgcactac
tactacatacacgttgaccagcgctctaactacctgcacaggcaggcacaggtcttggcg
tcccattatcccaatgtgagggtgacaccatggcgcatggccaccatctggggaggggcc
agtttgctgaccatgtatctgcgcagcatggctgacctgctggccatgagggactggaac
tgggacttcttcatcaatctcagcgctgccgactacccaatcaggaccaacaaccagctg
gtggccttcctgtccaaatacagagacatgaatttcattaagtcccatggcagggacaat
gcaaggtttatccgtaagcagggtctagatcgcctgttctacgagtgtgacactcacatg
tggaggctgggcgatcgacggatccccgagggcgtctctgtggacggtgggtccgactgg
ttccttctcaaccgcatgtttgttgaatatgtgatcaactccaaggacgacctggtcacc
aatatgaagcagttctacgcttacaccctgctacctgctgagtcgttcttccacactgtg
ctggagaacagtgcccactgtgagagcatggtggataacaacctgcgcatcacaaactgg
aaccgtaaactggggtgtaagtgtcaatacaagcacatcgtggactggtgtggatgctct
cccaatgacttcaagcctgctgacttccaccgcttccagcaaacggttcggcccaccttc
ttcgctcggaagtttgaagccagcgtgaaccaggagatagtgaaccagctggatgcctac
ctgtttggaccgtttcctcagggagcgccgggactgaactcgtactgggagaatgtgtac
gacgagccagatggcgtcgccagcctgtcggacacacagctcacgttctaccactccttt
tcaagactgggcctcggtcgagctgcagcttcactgcagggaaacccaaacgatcacagc
tgcaggtacttccccatgggccacccggtgtcggtgcatctctacttccactttgaccag
ttccaaggctacctggtccagcaccacgccacaaacctggcaacgagcaagctggagctc
atggagacctgggtggcgcccaagaagaacttcaggctcaccacacctcctagcagcacg
tttagcaggttacagttcgcggagatcggcacagagtgggatgctaaagaacgcatgttc
agaaacatcggcggcctgatgggtcccatggacgaggcggtgggcatgcagaagtggaat
aaagggccgaacgtcaccgtcaccatcgtttggatcgaccccaccaacgtcatcgccgcg
acctatgacatcctgatcgatgcgagcgcagagttcacacactaccgcccaccactcaac
cagcctctgcgccctggggtgtggagcgttcgcatcctgcacaactggagccctgtggct
gagatcagattcctcatcaccccactggcttataacaagcaccagcccatcaggcaaaag
gacacgttaaagctccacaatggcccgctgaagaacagctacatggagcagagctttcac
ggtctgaacccggttctgaacatccccgtcagcctggcgtacgtggaacaagcaaagagg
aacgcagccctgagtggcccagagctggagcgctgggtggacggcctggtgggtgagctg
tgggaggcagcggatgtctgcgctgttggacccaccgcctgcccggtcatgcaggcctgc
accaaaagtccgtggagctccatgagcccagatcccaaatcccagctcggagcgccgcgg
gccgacggtcgcattaggtag
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