Nematolebias whitei (Rio pearlfish): 119422366
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Entry
119422366 CDS
T08042
Symbol
eif3ba
Name
(RefSeq) eukaryotic translation initiation factor 3, subunit Ba
KO
K03253
translation initiation factor 3 subunit B
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119422366 (eif3ba)
03012 Translation factors [BR:
nwh03012
]
119422366 (eif3ba)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119422366 (eif3ba)
Translation factors [BR:
nwh03012
]
Eukaryotic type
Initiation factors
eIF-3
119422366 (eif3ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_RIG_2nd
RHSP
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119422366
NCBI-ProteinID:
XP_037545656
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Position
16:15660592..15671215
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AA seq
683 aa
AA seq
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MQDTAAMMDDPEYDEDEEEEPSFSDPEDFEDDVDDEELLDDILREKPQEADGIDSVVVVD
NVPQVGPERLEKLKNVIHKIFSKFGKITTEFYPEADGMTKGYIFLEYAAPTQALEAVKNA
DGYKLDKQHTFRVNLFTDFDKYMTISDEWEPPEKQPFKDFGNMRHWIEDPDCRDQYSVIY
EAGERTAIFSNDAKESILAEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQR
FSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHCESSAHWPIFK
WSHDGKFFARMTPDTLSIYETPSMGLLEKKSLKITGIKDFSWSPGDNIIAFWVPEDKDIP
ARVTLMQLPSRQEIRVRNLFNVVDCKLHWQRNGDYLCVKVDRTPKGTQGVVTNFEIFRMR
EKQVPVDVVEMKEGIIAFAWEPNGSKFAVLHGESPRINASFYHVRNNGKIELIKMFDKQQ
ANSIFWSPQGQFLVLAGLRSMNGALAFVDTSDCIMMNIAEHYMASDVEWDPTGRYVVTSV
SWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPKPPSLLSGDQIKMIKKDLKKYSKI
FEQKDRLSQSKASKELVDKRRAMMEEYRQYKEAALQVYIEQKDMRLELRGGVDTDELDSN
VDDWEEETIEFFINEEIIPLGDL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacggcggctatgatggacgaccctgagtatgatgaggatgaagaggaggaa
ccttccttcagcgacccggaggacttcgaagatgacgtcgacgacgaggagcttctggat
gacatcttgcgggagaagcctcaggaagctgatgggatagactcggtggttgtggtggac
aatgttcctcaggtgggcccagagcgtttggaaaaacttaaaaacgtcatacacaagatt
ttctccaagtttggcaaaatcacaactgagttttatccagaagctgacggcatgaccaaa
gggtacatcttcttggagtatgctgctcccactcaggctctcgaggcggtcaagaacgca
gacggatacaaacttgacaaacaacatacattcagagtcaacctcttcactgactttgat
aagtacatgaccatcagtgatgagtgggaacctccagagaaacagcctttcaaagatttt
ggcaatatgcgtcactggattgaggacccagactgccgtgaccagtacagtgtaatttac
gaagctggagagaggacagccattttttccaatgatgctaaagaatcaatcttagcagaa
gagcgagcccgctggacagagacgtacgttcgctggtctcctaaaggcacctacctggct
actttccatcagcgaggcattgcattgtggggcggcgagaagttcaaacagatccagagg
ttcagccatcagggtgtgtcgctcatcgacttctcaccgtgtgagaggtatgttgtgacc
ttcagtccactgatggacaccaaggaggatccacaagccatcatcatctgggacatcctg
actggacagaagaagagaggcttccactgcgagagctctgcgcactggcccatattcaag
tggagccatgatgggaagttctttgctaggatgactccagacactctgagcatttatgaa
actccatcaatgggcctgttggaaaagaagagtctcaagattactggcatcaaggacttc
tcgtggtctcctggtgacaacatcatagcgttctgggtacccgaggacaaggacatcccg
gcacgagtcactctgatgcagctgccttcccgccaggagatccgtgttcgtaacctcttc
aatgttgtggactgcaaactgcactggcagagaaatggagattatctgtgcgtgaaagta
gacagaacacccaaaggaactcagggtgttgttaccaactttgaaattttccgaatgaga
gagaagcaggttcctgtcgatgtggtagaaatgaaagaaggaattattgctttcgcctgg
gagcccaacggcagcaagtttgctgttctccacggagagtctccgagaatcaacgcctcc
ttctatcatgtcagaaacaacggcaagatagagctcataaagatgtttgacaagcaacag
gccaacagcattttctggagcccccagggacagtttttagtgctggctggactccggagt
atgaacggagctcttgcctttgtggacacctccgactgcatcatgatgaacatcgcagag
cactacatggcatctgacgtcgaatgggacccgaccggtcgatacgttgtcacctctgtg
tcctggtggagccacaaggtggacaatgcgtactggctgtggacgtttcagggccgtctc
cttcagaagaacaacaaagaccgcttctgtcagctgctctggagacccaaacctcccagt
ctgctcagtggagatcagattaagatgatcaaaaaggatcttaagaaatattcgaagatc
tttgagcagaaggatcgtctgagccagtccaaggcttccaaggagctggtggacaagcgc
agggccatgatggaggagtaccgtcaatacaaggaggcagcgctgcaggtctacatcgaa
cagaaggacatgcgccttgagctcagaggaggtgtggacactgatgagcttgacagcaac
gtggacgactgggaggaggagaccattgagttttttatcaacgaagaaatcattcccctt
ggagatctgtag
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