Nematolebias whitei (Rio pearlfish): 119422369
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Entry
119422369 CDS
T08042
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04110
Cell cycle
nwh04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119422369 (smc3)
04114 Oocyte meiosis
119422369 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119422369 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119422369 (smc3)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119422369 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
119422369 (smc3)
Proteoglycans [BR:
nwh00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119422369 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
119422369
NCBI-ProteinID:
XP_037545659
LinkDB
All DBs
Position
16:16842620..16877282
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKASAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEMNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELAELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSEDLDGLVDKTEAEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcattattcagggattccgaagttacagggatcaaactgttgtg
gaccctttcagtcccaaacacaatgtgatcgttggccgaaatggatcaggaaaaagtaac
ttcttctatgccatccagtttgtgctcagcgatgaattcagccacttgcgacctgaacag
cgtctggctcttcttcatgaaggaactggtccacgtgtcatttcagcttttgttgagatt
atatttgacaactctgacaaccgactaccgattgacaaagaggaagtctccctccgtcgt
gtcattggtgcaaaaaaagaccagtacttcttagacaaaaagatggtgactaaaaatgac
gtaatgaaccttctggagagtgccggcttctcccgcagtaacccttactacattgtcaag
cagggaaagatcaatcaaatggccacagcacctgactcccagcgtctgaagcttctgaga
gaggtggcaggaacacgagtatatgatgaacgaaaggaggagagcatttctctcatgaag
gagactgaggggaagcgagagaagatcaacgagctgttaaagtacatcgaagagcggctg
cataccctggaagatgagaaggaagagttggcccagtaccagaagtgggacaaaatgaga
cgagcactggagtacaccatttacaaccaagagctgaatgaaacccgcgctaaattggac
gagttgtcttcgaagagggaaacctgtggagacaaatccagacagctgcgtgatgctcag
caagatgcccgagacaaagtagaggagacggagcgtgttgtgcgcgagctgaagtccaag
gcttcggctatgaaggaggagagagagcaactgtcggcggagcgccaggagcagatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggatgagctggcaggcaacagt
gaacagaggaaacgtctgctgaaagagcgtcagaagttgctggagaaaattgaggagaaa
caaaaagaactgcaggagactgaacctaaattcaacatggtgaaggaaaaagaggagcgg
ggcatctccaggcttgctcaagctacacaagagaggactgacctgtatgccaagcagggt
cgtggcagccagttcacatccaaagaggagagggataagtggatcaagaaagagctgaag
tccctggaccaggccatcaatgacaaaaagaggcagatcgcagccatccacaaagatctg
gaagacacggagatgaacaaagagaagaaccttgagcagtacaataaacttgatcaagat
ttaaatgaagtcaagactcgtgtagaggagctggacaaaaagtattacgaagtgaagaac
aagaaagatgaacttcaaagtgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccttggcagccaaacgagaagacctggagaagaaacagcagctccttagagcggcc
acaggcaaggctattctcaatggtatcgacagcattaacaaagtcctggagcatttcagg
cggaagggaataaaccagcatgttatcaacggttaccatggcattgtcatgaataatttt
gagtgtgagccagctttttacacctgtgtggaagtgactgctggaactagactgttttac
cacattgtggagacagatgaagtgagcacaaaaatcctcatggagttcaacaaaatgaac
ttgcctggagaggtcactttccttcctcttagcaagctggatgtcagagacaccgcctat
ccagaaaccaacgatgccatccctatgatcagcaagctgcgctacagccccaactttgac
aaggcattcaagcacgtgtttgggaagaccctaatttgtcgcagcatggaggtttccacc
cagctggcaagagcctttaccatggactgcataactctggagggtgaccaagtgagccac
cgtggagctctgacaggaggctactatgacaccaggaaatctcgcctggagctccagaaa
gacatgaggaaggctgaagaggagctggctgagctggaggccaaactcaacgagaaccta
cgtaggaacattgaacgcatcaacaatgagattgaccagctgatgaaccagatgcagcaa
atcgagacacagcagaggaagtttaaggcgtccagagacagtattctgtcagaaatgaag
atgctgaaggagaagaggcagcagtcagagaaaacattcatgcctaagcaacgcagtctc
caaagtttggaggccagccttcatgccatggagtccaccagggagtcgctgaaggctgaa
cttggaacagatctcctctctcagctcagtcttgaggaccaaagacgcgtcgatgatctc
aacgatgagattcgtcagcttcagcaggacaacaggcagctgctgaatgaaagaatcaag
ctggagggaatcatgaccagggtggaaacgtatctcaatgaaaacttgcggaaacgtctt
gaccaagtggagcaggagttaaacgagctacgagaaactgagggcggcacagtgctcaca
gctacaacgtctgagctggacggcatcaacaaacgtgtcaaagacactttggctcgatca
gaagacctggatgggctggttgacaagacagaagcagagattaaggatcacataaagagc
atggagcgatggaagaacattgaaaaagagcaaaatgacgccatcaaccacgacacaaag
gagctggagaaaatgaccaacagacagggcatgctgctcaagaagaaagaggagtgcatg
aagaaaatcagagagctgggctcgctgcctcaggaggcctttgagaagtaccagaccctc
acactcaaacagctgttcagaaaactggagcagtgcaacacagagctgaagaagtacagt
cacgtcaacaagaaagctctggaccagttcgtcaatttctctgagcagaaggagaagtta
atcaagcgtcaggatgagctcgaccgtggctacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaagtacgaggccatccagctcaccttcaaacaggtgtcgaagaacttc
agcgaggttttccagaagctggtgccaggaggcaaagctacgctggtgatgaagaagggg
gatgccgaaggcagccagtcccaggatgaaggagagggcggtgcagatagcgagaggggt
tctggttctcagagcagcgttccctcagtggaccagttcaccggagtcggcatcagagtg
tcgttcactgggaagcagggagagatgagggagatgcagcagctgtctggaggacagaaa
tctctggtagctctggctctgatattcgccattcagaagtgtgaccccgctcctttctac
ctgttcgatgagatcgatcaggccctcgacgctcagcacaggaaggctgtctcagatatg
attgttgagctggcgggccacgctcagttcatcaccaccaccttcagacctgagctgctc
gagtctgcagacaagttctacggagtcaagttcagaaacaaggtgagtcacatcgatgtg
atcacagcagagcaggccaaagacttcgtggaggatgacaccacccatggttaa
DBGET
integrated database retrieval system
