Nematolebias whitei (Rio pearlfish): 119422371
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Entry
119422371 CDS
T08042
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119422371 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_EndoS
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
119422371
NCBI-ProteinID:
XP_037545660
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All DBs
Position
16:16980898..16999138
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALASLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAQGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPPVVYRLSSLTTLYLRFNRITTVEKDIQNLSKLTMLSIRENKIKQLPAEIGELCCL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISLLPEGLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKISED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPIEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQQLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLTHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaggactcaaaagaaaaagaccccaaaggtggtccg
gcaggtaaagaaagggaaaaagaggccaaggctttagccagcttagtcaaagacggtggc
aaagaaacaaagaccaaagggaaagatgccaaagaaggaaagaaggacacaagcagctca
acaccgggtgttgccttctctgttgacaatacaataaagcggccaaatccggcacaaggt
acacgcaagaaatccagcaatgcagaagttatcaaagagctcaataagtgtcgggaggag
aattcaatgaggctggacctatccaaacggtccattcacatgttgcccacctctattaag
gagttgactcagttggctgaactctacctatatagcaacaagctacagagcctaccagct
gaggtgggttgtctatcaggcttggtcactttggccctcagtgagaactccttgaccagt
ttgcctgattccctggactcactgaagaagctccgaatgcttgacctccggcacaacaag
ctcagagagatcccacctgtcgtctatcggctgtcttctctgaccacgctgtacctgcgc
ttcaatcgcatcacaactgtagagaaggacatccagaacctgtccaagctcaccatgctc
agtattcgtgagaacaagattaagcagctacctgcagagataggtgagctatgctgcctc
attactttggatgttgcccataaccagttggaacatctaccaaaggagattggaaattgc
acacaaataaccaacctcgacttgcagcacaatgagctcctggacctcccagagacgatt
ggcaatttggcaagcataaatcggttaggtctgcgatataatcgattgtcggcgatcccc
agatctttagccaaatgtcgagaactagaggagttaaacctcgaaaataacaacatttca
ctgttgccagaaggcctgctgtcgagtttattaaacctgacaagtcttacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccttctcagttctccaccatttactccctc
aacatggagcacaaccgtatcaacaagatcccatttggtatcttctccagggccaaggtg
ttgagcaagcttaacatgaaggataaccagttaacatctctgccactggattttggcaca
tggaccagcatggttgaacttaacctggccactaatcagctgactaagatctcagaagat
gtctgtggtctcgtctctctagaggtgttaatattgtccaataaccttctgaaaaagtta
ccgcatggtattgggaatttgagaaagttgcgagaactcgacttggaggaaaataagttg
gaatgtctaccgattgaaatcgcttacctaaaagatttacagaaattggtgttgacaaat
aatcagctaactacattacccagaggcatcggccacctcaccaacctgacccatcttggt
ttgggtgagaacttgctgcaacagctgccagaggagattggcactctggagaatttggag
gagctgtacctcaacgacaaccccaatctgcatagcctcccatttgagctcgccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcacccacctgccgccccagatt
gtcgcaggaggtccctctttcatcatccagtttctcaagatgcagggaccgtaccgtgcc
atggtctga
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