Nematolebias whitei (Rio pearlfish): 119422388
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Entry
119422388 CDS
T08042
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119422388
03036 Chromosome and associated proteins [BR:
nwh03036
]
119422388
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119422388
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119422388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-met
Zf-C2H2_ZNF451_C
zf-C2HE
zf-C2H2_15
zf-C2H2_6
DTHCT
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
119422388
NCBI-ProteinID:
XP_037545684
LinkDB
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Position
2:complement(6591992..6599125)
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AA seq
754 aa
AA seq
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MEGEVITIDAAQAAAMAAEGKVLPEDGEALIQAAQDEVAGNMDMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDDGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTAATVEGLQATYVE
ATTANKDVEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQGTREEEEEEEDEETVEVE
STVPQQDDPEWSKDPEYQPIASVRKGKKGKKSRLRYADGDRDMDVSVYDFEEEQQEGLLS
EVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHL
CGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDY
SSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQ
SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHE
RYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCDKTFRQKQLL
DMHFKRYHDPNFVPTAFVCNKCSKTFTRRNTMLRHAENCMGEAAGDENGIPTPKKGRRGR
KRKMQSRREDDDDDDEDNTEEELDDIEEEDEILAEIEVEQEAPVVPIPAPVEPPVKRKRG
RPPKNRPEPAAIIRVEDEVTGEVDDIIVKKEVGAEQDDISGAAEAEEVIVGGVKSTIQME
ELAQEEDAAQEVQLSEAPPNGDLTPEMILSMMDR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttattaccatagatgcagctcaagctgctgccatggctgctgagggg
aaggttctgccagaagatggagaagctttgatacaagcggcgcaggatgaagtggccggg
aacatggatatgatggtgatggatgctcttgatccaactctgctgcaaatgaagacagag
gttttggagggaggcggcacagtaaccgttactggtggagacgatggtcagatcatcaca
ctgcaggtggtgaatatggaagaacaagcaggtgctgcattgggtcttggtcagcttcag
ctggttcaggtacccgtgactgcagcaactgtggagggtctccaggccacttatgtcgaa
gcaacaacagctaacaaggatgtagaaccagttatttgtcacacacttcctttgcctgaa
ggcttccaggttgtaaaagtgggtgccaatggtgaagtggagactgtggagcaggaggag
ctccaaggaacaagggaggaggaggaagaagaggaggatgaggagactgtggaagtggaa
tccactgtccctcagcaagatgacccagaatggtcaaaggacccggagtaccagccgatt
gcctctgtccgcaaggggaagaaagggaaaaagagtcgccttcgctacgcagatggtgat
cgtgacatggatgtgtcggtgtatgactttgaggaagagcagcaggaggggctgctgtca
gaggtgaatgcagagaaggttgtgggcaacatgaagcctccaaagcccacaaagatcaag
aaaaaaggtgtgaagaagacctttcagtgtgagctctgtagctacacctgtccaagacgc
tctaatctggaccgtcacatgaagagccacacagatgagagaccacacaagtgtcacttg
tgtggaagagccttcaggacagtcacactgctgagaaaccatctcaatacacacacaggc
actcggcctcataaatgcacagattgtgacatggcatttgtgaccagcggtgagttggtg
cgccatcgccgttacaaacacacacatgagaagccattcaagtgctcgatgtgcgactat
tccagtgtggaggtgagcaagttgaaaaggcacattcgctctcatacaggagagcgaccc
ttccagtgcagcctgtgcagctatgccagcagagacacctacaagctgaagagacacatg
agaacgcattcgggtgagaagccgtacgagtgctacatctgccatgctcgtttcactcag
agcggcaccatgaagatgcacattctgcagaaacacacagagaatgtggccaagttccac
tgcccacactgtgatactgtcatcgcacgcaagagtgaccttggcgttcacttgaggaag
cagcattcgtttattgagacgggcaagaaatgtcgttactgtgatgctgtgtttcatgag
cgctatgctctcatccagcatcagaagactcacaagaatgagaagcgcttcaagtgtgac
cagtgtgattactgctgcagacaggagcgccacatgataatgcacaagcgtactcacaca
ggggagaagccgtttgcctgtagccagtgtgacaagactttccgtcagaaacagctcctg
gacatgcacttcaagcgctatcatgatcccaactttgtccccactgctttcgtctgcaac
aagtgtagcaagacgttcacccgccggaacacaatgctgcgtcacgctgagaactgcatg
ggtgaagctgctggagatgaaaatggaatacctactcccaagaaaggccgccgtggcagg
aagaggaagatgcagtccaggagggaggatgatgacgacgacgatgaggacaatactgag
gaagaactggatgatatcgaggaggaagatgaaatattagctgaaatcgaggtggagcag
gaagctccagttgttcctattccagcaccagtggagcccccggtcaagaggaaacgtggg
cgacccccaaagaataggcctgaaccggctgccatcatccgcgtggaggacgaggtcacc
ggagaggtcgatgacatcatagtgaagaaggaggttggcgctgaacaagacgacatcagc
ggcgcagcagaggcagaggaagtgatagtcggcggcgtcaagtcgaccattcagatggag
gagctggctcaggaagaagacgcagcacaggaggtgcagttgtctgaggcccctcccaac
ggagacctgacccccgagatgatcctgagcatgatggaccgatga
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integrated database retrieval system