KEGG   Nematolebias whitei (Rio pearlfish): 119422388
Entry
119422388         CDS       T08042                                 
Name
(RefSeq) transcriptional repressor CTCF
  KO
K23195  transcriptional repressor CTCF
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nwh03000]
    119422388
   03036 Chromosome and associated proteins [BR:nwh03036]
    119422388
Transcription factors [BR:nwh03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    119422388
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    119422388
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_jaz zf-C2H2_7th_ZNF462 zf-C2H2_REST Zf-C2H2_ZNF451 zf-met Zf-C2H2_ZNF451_C zf-C2HE zf-C2H2_15 zf-C2H2_6 DTHCT zf-WIZ
Other DBs
NCBI-GeneID: 119422388
NCBI-ProteinID: XP_037545684
LinkDB
Position
2:complement(6591992..6599125)
AA seq 754 aa
MEGEVITIDAAQAAAMAAEGKVLPEDGEALIQAAQDEVAGNMDMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDDGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTAATVEGLQATYVE
ATTANKDVEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQGTREEEEEEEDEETVEVE
STVPQQDDPEWSKDPEYQPIASVRKGKKGKKSRLRYADGDRDMDVSVYDFEEEQQEGLLS
EVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHL
CGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDY
SSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQ
SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHE
RYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCDKTFRQKQLL
DMHFKRYHDPNFVPTAFVCNKCSKTFTRRNTMLRHAENCMGEAAGDENGIPTPKKGRRGR
KRKMQSRREDDDDDDEDNTEEELDDIEEEDEILAEIEVEQEAPVVPIPAPVEPPVKRKRG
RPPKNRPEPAAIIRVEDEVTGEVDDIIVKKEVGAEQDDISGAAEAEEVIVGGVKSTIQME
ELAQEEDAAQEVQLSEAPPNGDLTPEMILSMMDR
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggagggcgaggttattaccatagatgcagctcaagctgctgccatggctgctgagggg
aaggttctgccagaagatggagaagctttgatacaagcggcgcaggatgaagtggccggg
aacatggatatgatggtgatggatgctcttgatccaactctgctgcaaatgaagacagag
gttttggagggaggcggcacagtaaccgttactggtggagacgatggtcagatcatcaca
ctgcaggtggtgaatatggaagaacaagcaggtgctgcattgggtcttggtcagcttcag
ctggttcaggtacccgtgactgcagcaactgtggagggtctccaggccacttatgtcgaa
gcaacaacagctaacaaggatgtagaaccagttatttgtcacacacttcctttgcctgaa
ggcttccaggttgtaaaagtgggtgccaatggtgaagtggagactgtggagcaggaggag
ctccaaggaacaagggaggaggaggaagaagaggaggatgaggagactgtggaagtggaa
tccactgtccctcagcaagatgacccagaatggtcaaaggacccggagtaccagccgatt
gcctctgtccgcaaggggaagaaagggaaaaagagtcgccttcgctacgcagatggtgat
cgtgacatggatgtgtcggtgtatgactttgaggaagagcagcaggaggggctgctgtca
gaggtgaatgcagagaaggttgtgggcaacatgaagcctccaaagcccacaaagatcaag
aaaaaaggtgtgaagaagacctttcagtgtgagctctgtagctacacctgtccaagacgc
tctaatctggaccgtcacatgaagagccacacagatgagagaccacacaagtgtcacttg
tgtggaagagccttcaggacagtcacactgctgagaaaccatctcaatacacacacaggc
actcggcctcataaatgcacagattgtgacatggcatttgtgaccagcggtgagttggtg
cgccatcgccgttacaaacacacacatgagaagccattcaagtgctcgatgtgcgactat
tccagtgtggaggtgagcaagttgaaaaggcacattcgctctcatacaggagagcgaccc
ttccagtgcagcctgtgcagctatgccagcagagacacctacaagctgaagagacacatg
agaacgcattcgggtgagaagccgtacgagtgctacatctgccatgctcgtttcactcag
agcggcaccatgaagatgcacattctgcagaaacacacagagaatgtggccaagttccac
tgcccacactgtgatactgtcatcgcacgcaagagtgaccttggcgttcacttgaggaag
cagcattcgtttattgagacgggcaagaaatgtcgttactgtgatgctgtgtttcatgag
cgctatgctctcatccagcatcagaagactcacaagaatgagaagcgcttcaagtgtgac
cagtgtgattactgctgcagacaggagcgccacatgataatgcacaagcgtactcacaca
ggggagaagccgtttgcctgtagccagtgtgacaagactttccgtcagaaacagctcctg
gacatgcacttcaagcgctatcatgatcccaactttgtccccactgctttcgtctgcaac
aagtgtagcaagacgttcacccgccggaacacaatgctgcgtcacgctgagaactgcatg
ggtgaagctgctggagatgaaaatggaatacctactcccaagaaaggccgccgtggcagg
aagaggaagatgcagtccaggagggaggatgatgacgacgacgatgaggacaatactgag
gaagaactggatgatatcgaggaggaagatgaaatattagctgaaatcgaggtggagcag
gaagctccagttgttcctattccagcaccagtggagcccccggtcaagaggaaacgtggg
cgacccccaaagaataggcctgaaccggctgccatcatccgcgtggaggacgaggtcacc
ggagaggtcgatgacatcatagtgaagaaggaggttggcgctgaacaagacgacatcagc
ggcgcagcagaggcagaggaagtgatagtcggcggcgtcaagtcgaccattcagatggag
gagctggctcaggaagaagacgcagcacaggaggtgcagttgtctgaggcccctcccaac
ggagacctgacccccgagatgatcctgagcatgatggaccgatga

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