Nematolebias whitei (Rio pearlfish): 119422394
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Entry
119422394 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
nwh04137
Mitophagy - animal
nwh04144
Endocytosis
nwh04340
Hedgehog signaling pathway
nwh04350
TGF-beta signaling pathway
nwh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119422394
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119422394
04350 TGF-beta signaling pathway
119422394
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119422394
04137 Mitophagy - animal
119422394
09144 Cellular community - eukaryotes
04520 Adherens junction
119422394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119422394
04121 Ubiquitin system [BR:
nwh04121
]
119422394
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119422394
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119422394
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119422394
Autophagy
Mitophagy
Other mitophagy associated proteins
119422394
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
HECT type E3
119422394
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119422394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
119422394
NCBI-ProteinID:
XP_037545687
LinkDB
All DBs
Position
16:19579407..19634882
Genome browser
AA seq
775 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVACGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRVAMDIQNTNLS
HPPQLKDQGGPGGPQQALSPAQLPEEAECLTVPKYKRDLVQKLKVLRQELSQQQPQAGHC
RIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKPITLEDMESVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIPV
DEETKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKID
IADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANANNLPKAHTCFNRVDIPPYESYEKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagttcggagaaatggcccagtaaaactgcggttgacagtcctgtgt
gcgaagaacttggcaaagaaagacttctttcggttgccggatccttttgctaaagtagtg
gtggatggttctggacaatgtcactctacagacactgtcagaaatactcttgacccaaag
tggaatcaacattatgatctttacattggaaaaacagactctattactatcagcgtatgg
aaccacaagaagatccacaaaaagcagggtgcaggtttcctgggctgtgtccgcctcttg
tccaacgccatcaacagacttaaagacacaggctatcagagattggatctgaataagctg
ggccccaatgacaatgatactgtgagaggacagatagttgtgagtctgcagtccagagat
cgcatcgggaccgggggtccagtggtagactgcagtcgtctgtttgacaatgatttgcct
gatggctgggaggagaggaggacagcctctggaaggatacaatatctgaaccacatcaca
cgcaccacacagtgggagagacctaccaggccagcatcggagtactctagcccatcaggg
cgtccgctgagctgtgtggtagatgagaacacgccagtgatgactcccgttaacggggca
gtggcctgcggacctccaggcgaacaacgggtccaagagcgccgggttcgatcgcagcga
catcggaattacatgagtcgaacacacttgcatactccgcctgacctgccagagggttat
gagcaaaggacaacccagcagggccaagtgtatttccttcatactcagactggagtcagt
acttggcatgacccccgggtacccagggacctaagtaacgtaaactgtgaggagctgggt
ccactgccaccaggctgggagatcaggaacaccgccactggtcgcgtttactttgtcgac
cacaacaaccgaacaacacagttcacagaccctcgactgtctgctaacctacatctagta
ctcaatccaagtccaaatggttcccgtgtggccatggacatccaaaacactaacctcagt
cacccgccgcagttaaaggaccagggtggtcctgggggccctcagcaagctctgtccccg
gctcagttacctgaagaggccgagtgcctgacggtgcccaaatacaagagggacctggtg
caaaagctgaaggtcctgcgacaagaactttcacagcaacaaccccaggctggtcactgt
cgcatcgaagtcagccgggaggagatctttgaggagtcgtaccgtcaggtgatgaagatg
cgcccaaaagatctttggaaaagactgatgataaaattcagaggagaggagggactggat
tatggcggtgtcgcgagggaatggttatacctgctgtcacacgagatgctgaacccgtac
tacggcttgttccagtactccagagatgacatttacactctacagatcaaccccgactct
gcagtcaacccagagcatctgtcgtacttccactttgtgggtcgtatcatgggcatggcg
gtgttccacggccattacatcgacggaggcttcacgctgcccttctacaagcagctgctt
ggaaaaccaatcacgctggaggacatggagtctgttgaccctgacctccacaacagcctc
gtttggattctagaaaatgatatcactggtgttctggaccacaccttctgtgtagagcac
aacgcctacggagaaataatcccacatgaactcaagcccaacgggaaaagtatccctgtg
gatgaggagaccaagaaggagtatgtcaggttgtacgtgaactggcgtttccttcatggc
atcgaggctcagtttctggccctgcagaaaggcttcaacgaggtcatcccacagcacctg
ctcaaagccttcgatgagaaggaactggagctgatagtatgcggtctggggaagatcgac
atcgctgactggaagtccaacacccgtctgaagcactgcacccctgacagcaacattgtg
aaatggttctggaaagctgtggagtcgtttgatgaggagaggagagcacggctgctgcag
tttgttactggttcatctagagtcccactgcaaggctttaaggctttacagggcgctgct
ggacccagactcttcaccattcatcagattgatgccaacgccaataacctgccgaaagcc
catacctgtttcaaccgtgtcgacattcctccctacgagagctacgagaaactttacgac
aagttactgacggccatcgaggagacttgtggctttgcagtggaatga
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