Nematolebias whitei (Rio pearlfish): 119422471
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Entry
119422471 CDS
T08042
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119422471 (lrba)
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Others
Others
119422471 (lrba)
Endosome - Golgi transport
119422471 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
119422471 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_WDHD1_1st
KNTC1_N
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_1st
SUKH_6
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
119422471
NCBI-ProteinID:
XP_037545772
LinkDB
All DBs
Position
16:28076137..28388840
Genome browser
AA seq
2935 aa
AA seq
DB search
MANADPAERKDGQAAGLNPGVPVRGIRMKFAVLAGLVEVGEVSNRDIVETVFNLLVGGQF
DLEMNFIIQEPESIVCMVELLEKCEPNCQAEIWSIFTAILKKSVRNLQACTEVGLIQQVL
QRISAADSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKTQWPRHAVKLLSVLKYMA
HRNGPDSFFSFPGKNAAAIALPPIARWPYQNGFTFHTWLRMDPLNNINADKDKPYLYCFR
TNKGMGYSAHFVGGCLIVTSLKSKGKGFQHCIKYDFKPQKWYMVTLVHTYNRWKNSEISC
YVNGELASFGDIAWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFSEALSAAQILA
IYQLGPSYQGTFKYRAESDLLFAEHHKTLLYDGKLSSCIALTYNPRATDAQLCLESSPKD
NASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSSQELDTSVC
CTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKLHVTRPVLDIVLAFSRYLSNL
QNGILLLKQLCDHILFNPAIWIHAPTKVQLTLYTYLATEFISTVTIYNAVRRVGTVLQIM
HTLKYYYWVVSPQDRSGIVPKGLDGPRPNHKEMLSLRAFLLLFVKQLIIKDHGVKEDELQ
SILNYLLTMHEDENLMDVLQLLVALMSEHPGSMIQAFDQRNGIRVIYKLLGSQNEGIRVQ
TLKVMGYFLKNLLPKRKSEVMLSHGLFSLMTERLMLHFGQFTMTTYNVLYEILTEQICTQ
VIHKQHPDPDSTVKILNPQILKVIAALVKNSPSSPESMEVRRAFLSDMIKLFNNSRENRR
SLLQCSVWQEWMLSLCFVNPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSI
THSKVTFEQHKENLSRMFRQYQQQESTSSQSTIRTVSGLSQSAETTKCVNGPPGEEMATS
TVIELKVDKLSQKSFDSATSPTITSGPLEVEEDRGQTSITVSNILARTEDEEQKAAKEEE
SSKGPSNVEKEIEAALIQKTNTEEKTEDFKNENTVTEVAAEKSNDDETTESSQSVTADIK
TEEVEGDSAMPPGDDAHTDDERSVEDTKRESSVSATEDVLNEKVPEKVDMPHQMSPEPVA
SLDNSVVGGTSVFNEGLADVPSVGDQVHPSDSDDSQESSYISAATGEEGEVVKNEQDTHH
DDDEGETNDHQEQESRMENETEMQDVELNENEESKSEEKPVSCLDSQAPRAEMPEENITE
SPKEKVSDHQSSSKTEGAFEDTQSSDAQTPSSVQDAVAASDSTSLNQPTETSGNSEGKTP
AGDSDNTTIISSSDTPKKTNSVSKTKEIKIARLDVSNVALDTERLELKETCTTETSQGQA
SVVSSAAGEAGSTSGQPRESSTPAPRSTMFRIPEFRWSHMHQRLLTDLLFSVETDIQAWR
SHSSKTVLDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPQLSAATSSTHELENIEP
SQGLPVEASITFLQRLINLADVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAIAVRN
CLECQHAQFKHEGSARSFTVMPSTVLGTAMSATAQSPVDVVTGGVSPVRDLDRLLQDMDI
NRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKRHPQRSQSSRSTDS
DVVSGGAEVENGFSLRRYDSGLSEDHTSAAASEADLSSSGVIHGPDAISEALSTLSSEVR
PAPSDSKGKNVKDILRSLVSTQSDDFTVDPSLLPPAFLGLVDDVARDSSLQFRSFDRSVV
VGPKKGSGMPSQGPPASVQMSSAASVSAGTPVDSVDVVSSDDALHAASVDSAASGDQLPA
STSLPSVPPLSSVTQNTTPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQE
LLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLV
RVANEAEFILSRQRAEDVHKHAEFESNCAEYAAEKREEEKLCDHLIRAAKFRDHMTATQL
IQKIVNILTDKHGAWGNSSKSRPREFWRLDYWEDDLRRRRRFVRNPFGSSHSEATLKAAA
EHASEEDVLKGKQSIKSQVLGNQNSDSETSLDGDDDTLSSLDEKDLENLTGPVNLSTSAE
LVAPAVVVKGTLSVTASELFFEVDEDEPAFKTIDPKILSYTEGLHGKWLFTEIRAVFSRR
YLLQNTALEVFLANRSEFEHMFNDSSVCCSSLCQHLNIFFKFSFFPCRRISLATPKQLFK
ASNMTQRWQRREISNFEYLMFLNTISGRTFNDLNQYPVFPWVITNYDSAELDLTLPSNFR
DLSKPIGALNPKRAAFFSDRYESWEDEQVPKFHYGTHYSTSSFTLMWLLRIEPFTTLFLN
FQGGKFDHADRTFSSLSRAWRNCQRDTSDVKELIPEFFYLPEMFVNANSYNLGVMEDGTV
VSDVELPPWAKNPEEFVQINRQALESEFVSCQLHQWIDLIFGYKQQGPEAARALNVFYYL
TYEGAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQD
VIMVLKFPSNSPVTHVVANTQPALTSPAIITVTASRLFAVNKWHGLTGHQSSADQQYQLP
VEIDPLIASNVGAHRRQISDLLDQSIQISSQCFVITADNRFILLCGFWDKSFRVYSTDTG
KLTQIVFGHRDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKHNSIGESPGAAFTI
PRAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSMNGDLLWTLEGPELCQRPRLIQS
SSEGHCIVYYDKGHFCLFTVNGKLLGHLEVEDGIKAMLLSKDGQYLLTGGDEGVVSVWQV
HDLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNKWHHEYQTRY
NT seq
8808 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcggatccggctgagaggaaggacggccaggctgcggggctcaaccccggg
gtgcccgtcaggggcatccggatgaagttcgccgtgctggccggcctggtggaagttgga
gaagtttccaaccgagacatcgtggagacggtgttcaacctgctggttggtggtcagttc
gaccttgagatgaacttcatcatccaggagccggagagcattgtgtgcatggtggagctc
ttggagaagtgtgagccaaattgtcaagccgagatttggagcatcttcacggccatcctc
aagaaaagcgttcgtaacctgcaggcatgcactgaagtggggctcatccagcaggtgctc
cagcgtatatcggcagctgacagcatgattgcagacctgttggtggacatgttgggtgta
cttgccagctacagcatcacagtgaaagaactgaagcttttcttcagcaagctacaaggg
gaaaaaacccagtggccacgtcacgcagtgaagcttttgtcggttctcaagtacatggca
cacagaaatggccctgactcattcttcagctttccagggaaaaatgcagctgcaatagct
ctgcccccgattgcaagatggccataccagaatggatttacattccacacgtggctccga
atggaccctctcaacaacatcaatgcagacaaagacaagccttatttatactgtttccgt
accaataaaggcatgggttactctgcgcactttgtgggcggctgtttgatagtgacctca
ttaaaatcaaagggcaaaggtttccagcactgtataaagtacgacttcaaaccacagaag
tggtacatggtgactcttgtacacacctacaatcgctggaaaaacagtgagattagctgc
tatgtgaacggagaactggcttcctttggagacatcgcctggtttgtcaacaccagcgac
acgtttgacaagtgttttcttggctcatctgagacggcagacgtgaaccgtgtgttctgt
gggcaaatgggggcagtgtacctgttttcagaagctctcagcgctgctcagatactggcc
atctatcagctgggtccaagctaccagggcacgttcaagtacagagctgagagcgacttg
ctgtttgccgagcatcataagaccttgctctacgacggcaagctgtcctcgtgcattgcc
ttgacctacaaccctcgcgccacagatgcccagctctgccttgagtcctctcccaaggac
aatgcctcaatttttgttcattcacctcatgctctcatgctgcaggatgtgaaggctgtc
gtgactcactcagtccagagtggcatccactccattggaggcgttcaggtcctcttccct
ctgtttgcacagctggattattgccagccctccagccaagagctggacacctccgtgtgc
tgcactttgctgtcctttgtgatggagctcttgaagaactctgtggcaatgcaggagcag
gtcttggcctgcaaaggatttctcgtcattggctacactttggagaagtcttccaagctg
catgtgacgcggcctgtcctggacattgttctagccttttccagataccttagcaacttg
cagaatggcatcttgttgctcaagcagctttgtgaccacattctgttcaaccccgccatc
tggattcatgctccaaccaaggtgcagctgacactctacacctacttggcaactgaattc
atcagcacagtgaccatctacaacgctgttcgcagggttggcacagttctccaaatcatg
cacacacttaaatactactactgggtggtcagccctcaggatcgcagtggaattgtaccc
aaaggtcttgatggtccgaggccaaaccataaggagatgctctccttgcgagcctttttg
ctgttgtttgtcaagcagctcataatcaaggatcatggagtgaaggaagatgagctgcaa
agtattctgaactacctcctgaccatgcacgaggatgaaaatctcatggatgtcctgcag
ttgttggttgctctaatgtctgagcatcctggctccatgattcaagcctttgaccagcgc
aacgggattcgtgtgatctacaagcttttgggctcccaaaacgagggaataagagtccaa
acactgaaggtcatgggctattttcttaaaaatctattaccaaagagaaaatctgaggtc
atgctgagtcatggtttgttctcgctgatgactgaacgtctgatgctccactttggccag
ttcactatgacgacctacaacgtgctgtacgagattcttacagagcagatctgcactcaa
gtgatccataaacaacatccggaccccgactctactgtgaagatcctcaacccacaaatt
ctgaaggtaatcgctgccctcgtgaagaactctccctcctcccctgaaagcatggaggtg
cgcagggcctttctgtcagacatgatcaaactgttcaataacagtcgggagaaccgcagg
agcctgctgcagtgctcagtgtggcaggagtggatgctctctctgtgctttgtcaacccg
cgcaacagtgaggagcagaaaatcacagagatggtgtacgccatcttccgcatcctgctc
taccacgccatcaaatacgagtggggcggttggcgtgtctgggtggacaccctgtccatc
acccactccaaggtgaccttcgagcaacacaaggaaaatctgtcccgcatgttccgtcag
taccagcagcaggagtctacaagctctcaaagcacaattagaacggtctctggtctcagc
caaagtgcagaaactacaaaatgtgttaatgggccacccggagaagaaatggcaacctcg
actgtcattgagcttaaagtggacaaactgtctcagaaatcctttgactcagcaactagt
cccactatcacctctgggccactggaggttgaggaggatagaggccaaacatccatcact
gtgtccaacattctggccagaaccgaggatgaagagcagaaggcggcaaaagaggaggag
tcttccaaaggtccctcaaatgttgaaaaagaaattgaagctgctctgatacaaaaaact
aatacagaggaaaagactgaagactttaagaatgaaaacacagtgactgaggtagcggct
gagaaaagcaatgatgatgaaactacagaaagcagccaatcagtgacagctgatattaag
acggaggaagtggaaggagactcggcaatgcccccaggtgatgatgcacacacagatgat
gaaagatcagttgaggacaccaaaagagaatcatcagtctcagctacagaagatgtttta
aatgaaaaagttccagaaaaagtagacatgccacaccaaatgtcccctgagcctgtagct
tctctggataacagtgttgttggaggaacttctgtcttcaatgaaggcttggctgatgta
ccgtctgttggtgaccaggtccatcctagtgattcagatgacagtcaagagtcctcttat
atttctgctgctactggagaggaaggggaagtagtaaaaaatgaacaagatacacatcat
gatgacgatgaaggggaaacgaatgatcaccaagaacaggagtcgagaatggaaaatgaa
accgaaatgcaggatgttgaattaaatgaaaatgaagaaagtaaatctgaggagaaacca
gtgtcttgtttggacagtcaagctcctcgagctgaaatgcctgaggaaaatatcacagaa
tcacccaaagaaaaagttagtgaccaccagtcttcctccaaaactgaaggtgcttttgaa
gacacgcagtcctctgatgctcaaacaccctcttcagtccaagatgctgttgcagcttca
gactccacctccctaaaccagcctacagagaccagtgggaacagtgaagggaagacccca
gctggggactctgataacaccaccattatctccagctctgacaccccaaagaaaacaaat
tctgtcagcaagaccaaagagatcaaaattgcccgactagacgtgtccaatgtggccttg
gacacggagagacttgaactgaaggagacttgtactacagaaacaagccaaggccaagca
tcagtagtatcatcagcagcaggagaagctggaagtacttcaggccaacctagagagagc
agcacaccagctcctcgctccactatgttccgtattccagagttccgttggtcccacatg
catcagcgcctcctgactgacctactgttttctgttgagacagacatccaggcttggagg
agtcactcttcaaagacggtcctggactttgtgaacagcagtgagaatgttgtgtttgtg
cacaacagtatacatctcatctcccaggtggtggacaatctcatcatggcttgtggaggc
attctacctcagctgtctgctgccacatcttccactcatgaactagaaaatattgaacca
tcccaaggtttgccggtggaagcttcaatcaccttcttgcagcgtctcattaacctcgca
gacgttctcatctttgccagctccctcaacttcacagagatcgaagctgagaagaacatg
tcatcgggtgggatcctgcgacagtgtcttcgtttggtgtgcgctatagccgtgaggaac
tgtctggagtgtcagcacgcccagtttaagcatgaaggttcagcacgaagcttcaccgtc
atgcccagcactgtactgggaacagccatgtctgccactgcccagagtcctgtcgatgta
gtgacaggtggcgtgtccccagtcagagacttggaccggctccttcaagacatggacatt
aaccgcctcagagcagttgttttcagagatattgaggacagtaagcaggctcagtttctg
gctcttgcagtcgtctatttcatctctgtcctcatggtgtcaaagtatcgagacatattg
gagccgcacaatgacaagagacaccctcagcgttcacagtcttcaaggagtacagacagc
gatgttgtttctggtggcgctgaggtagaaaacggcttctctctgagacgctatgattct
ggtctcagtgaggaccacacctcggctgcagcaagcgaggcggatctgtcatcctctggc
gtaattcatggtccagacgccatctctgaagccctgtctacgctgtcgtccgaggtcaga
cccgctccgtctgactcaaagggcaagaatgtgaaagacattttacgcagccttgtcagc
acccagtctgatgatttcacggtagacccgagtctgctgccaccagcgttcctcggactt
gtggatgatgtggcccgagactcatcccttcaatttcgctcttttgatagaagtgttgtc
gttggacccaaaaaagggagtgggatgccatctcaaggccctcctgcctctgtccagatg
tcctctgctgcctcggtgtctgctgggacaccagtcgacagcgttgatgtggtttcttct
gatgacgcccttcatgctgcctctgtagactctgctgcctcaggcgaccagcttccagcc
agcaccagcctgccatctgtcccaccactctcctctgtgacccagaacaccacccccaat
atgagtatctcagagcgtctggagcacgctcttgaaaaggctgctcctctgctgagggag
atctttgtcgactttgccccgtttctctctcgtactcttctgggcagccatggacaggag
ctgctgatcgagggcaccagtctggtgtgtatgaagtccagcagctcggtggtggagctt
gtcatgcttctgtgctctcaggaatggcagaactccatccagaagaatgcaggcctggcc
ttcattgagttggtcaacgagggcaggcttctcagtcacaccatgaaggaccatctggtt
cgtgttgcaaatgaagccgaattcatcctgagcagacaaagggctgaagacgtacataaa
catgcagagtttgagtcaaactgcgccgagtacgcagctgaaaaacgagaagaggagaaa
ctgtgcgaccacttgatcagagcagctaagtttcgagaccacatgacggccacacagctc
atccagaagatagtcaacatcctgaccgacaaacatggagcctgggggaactcttccaaa
agccggccgagggagttctggcgcctggactactgggaggacgatttaaggaggcgacgc
cgcttcgtcaggaaccccttcggatcgagtcactcagaagctacgctcaaagcagcggcc
gagcacgcatcggaggaggacgttctcaaagggaagcagtccatcaagagtcaggttctg
ggaaatcagaactctgacagtgagacgtcactggacggagacgatgacacgttgtcctcc
ttagacgagaaggacctggaaaacctaacaggcccagtaaacctgagcaccagtgctgag
ctcgtggctccggctgtggtggtgaaaggcaccctgtccgtcaccgcgtccgagctcttc
ttcgaggtggatgaagacgagccggcctttaagaccatcgacccaaagatcttatcctat
acagaaggccttcatggaaaatggctgttcacagagatccgagccgtgttctccagacgc
tatttgctgcagaatactgcgctggaagtatttttggcaaacagaagtgagtttgaacat
atgtttaatgactcttcagtttgttgttcttctttgtgccaacatttgaacatttttttt
aaattttcattttttccttgtagacgtatttctctggccacacccaaacagctcttcaag
gcttccaacatgactcagcgctggcagcgtcgagagatatccaactttgagtatctgatg
tttcttaacaccatttctggtcgtaccttcaacgatttaaatcagtacccagtctttccc
tgggtcatcaccaactatgactcggcagaacttgacctcactctgcccagcaacttcaga
gatctgtctaagcccattggtgcgctgaaccccaagagggcagcattcttctcagaccga
tatgagtcctgggaggacgagcaggtgcccaagttccactatggcacccactactccacc
tccagtttcaccttgatgtggctgcttcgcattgaaccttttacaactttattcctcaac
ttccaaggagggaagtttgaccatgctgaccgcaccttctcctcactgtccagagcctgg
aggaactgccagagagacacatctgatgttaaggaactcattccagagttcttctatctg
cctgagatgtttgtaaacgccaacagttacaacctgggagtgatggaagatggcactgtg
gtgtctgatgtggaacttccaccttgggccaaaaacccagaagagtttgtgcagattaat
cgacaggctctggagagtgagtttgtgtcctgtcagcttcaccagtggatcgacttgatt
ttcggctacaagcagcagggaccagaagctgcgagagcgctcaatgttttctattatcta
acctacgaaggcgcagtcaacctcagctccatcagtgaccccatgctcagagaggctgtg
gagtctcagatcaggagttttggacagaccccttgtcagttacttattgagccacacccg
ccccgaagctcagccatgcaagtgaccccactgatgttcacggagcagatgcagcaggat
gttatcatggtgctgaagttcccgtccaattctccggtgacacatgtagtggccaacacg
cagccagctctaacatcacctgctatcatcactgtcaccgccagccgcctctttgctgtc
aacaagtggcacggcttgacaggtcatcagagttcagctgatcagcagtaccaacttcct
gtggaaattgaccctttgatagctagcaacgtgggagctcatcgtcgtcagatctcagac
ctgctggatcagagcattcagatcagctcccagtgttttgtcatcacagctgacaaccgc
ttcatccttctgtgtggcttctgggataagagcttcagggtttactccactgacacaggc
aaactcactcagatagtgtttgggcaccgtgacgtggtgacgtgccttgctcgctctgag
tcctacatcggaggagactgctacatcctgtccggctccagagatgccaccctgctgctg
tggtactggaatggaaagcataacagcatcggagagagcccaggcgcagcatttaccata
ccgagggccatcctgacgggtcatgactgtgaggtgacgtgtgcgagtgtgtgtgctgag
ctgggtctcgtcatcagcggctgcaaagagggtccttgtctgatccattccatgaatggg
gacctgctgtggaccctggagggccccgagctctgccagcggcccagactcatccagtcc
tcctccgagggtcactgcatcgtttattacgacaagggacacttctgtcttttcaccgtc
aatggcaaactgctcggacacttggaagtggaagacggtatcaaggccatgcttctcagc
aaagatggccagtatctgctgacaggtggagatgaaggtgtagtttctgtctggcaggtc
catgaccttaaacagctgttcacctatcctggctgtgatgcaggaatccgctccatggcc
atgtcacatgaccaaaggtgcatcataacgggcatggcttctggaagcattgtgctcttc
tacaacgacttcaacaagtggcaccacgagtaccagaccagatactga
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integrated database retrieval system
