Nematolebias whitei (Rio pearlfish): 119422754
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Entry
119422754 CDS
T08042
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119422754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119422754
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
119422754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
119422754
NCBI-ProteinID:
XP_037546076
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Position
16:9965566..9975861
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AA seq
461 aa
AA seq
DB search
MGTRTGSGSTGNGSTTGSAPNTASETDAGRLEDREYRTELVFSGSELDSDSGDEEDTGGS
GGDKRGVKRERSDREDCRPSGHSSGGLNRGYGGVSSPGSGVKPGKKTRGRVKIKMEFIDN
KLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKA
LIQTCLNSPDSPPRSDPSSDQRMSATGFEETDLTYQVTETEGSPEGPKDMIKPTFSLPAV
TQASLPLQVQTSAPSWQPPSSNGTVLKTSAGVVLPGGITLMSGASLPPGTHTIPLSQLQG
QPVTVQSHAAPATLLQASPTQQTTLLRLPAAVPLSGTGVSQQVQTIQVQPSSQQVSTSQS
SSDLQSSASSSVAGHMMYPGGHTVMYAAPTPSLNDGSLTVLNTSHDPAAVQQVFLASLPP
VAAQIPVSAVQLHQMVLSQQSSNNLTELQVVNLDVHQSKED
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccagaactggatcagggagtacgggcaatggcagtaccaccgggtccgcaccg
aacacagcttccgagacagatgcaggccgactggaggaccgggagtaccgcactgagttg
gttttcagcggctccgagttggactctgactcaggggacgaagaggacacaggagggtcc
ggcggggacaagaggggcgtgaagcgagagaggagcgacagggaggactgtcgtccatca
ggacactcttctggtggtctgaaccgggggtacggaggagtgagctccccggggtccgga
gtcaaacccgggaagaagacccggggcagagtcaagatcaaaatggagttcatcgacaac
aaactgagacggtacaccactttcagcaagaggaagacaggcatcatgaagaaggcgtat
gagttgtctacgctcacaggtacgcaggtgttgctgctggtcgccagtgagacaggtcac
gtttacacctttgccaccaggaagctgcagccaatgatcacctcagagacagggaaagcc
ctgatccagacctgcctcaactctccggactccccgcctcgctccgatccgtcttctgac
cagagaatgagtgccacaggctttgaagaaacagacctcacctaccaggtgacggagacc
gagggcagccccgagggcccaaaggacatgatcaaaccaactttcagcctgcctgctgtc
actcaggcctccctgcccctgcaggtgcagaccagcgccccctcctggcagcccccctcc
tccaacgggacggtgttgaagacgtcagcaggtgtcgtcctccctggaggaattaccttg
atgtcaggtgcctctctgccccccggcacacacaccatccccctcagccagctgcagggc
caacctgtgaccgtccagagccatgcagcccccgccaccttactgcaagcttcacctaca
caacaaaccaccctgctccgcctccccgccgctgtgccactgtcaggaactggagtgtct
cagcaggtgcaaaccatccaggttcaacccagctcccagcaggtttccaccagtcagagc
agctctgatctacagagctcagcctcctcctcagtggcaggtcacatgatgtaccccggc
ggtcacacagtgatgtatgctgcaccaacaccctcactgaatgatggcagcctcaccgtt
ctcaacacgtcacatgaccccgctgccgtccagcaggtcttcctcgcttctcttcctcct
gtcgctgctcagatcccggtttctgccgtccagctgcaccagatggtcctcagccagcag
agcagcaacaacctgacagagcttcaggtcgttaatctggacgtccaccaatcaaaagaa
gactga
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