Nematolebias whitei (Rio pearlfish): 119422778
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Entry
119422778 CDS
T08042
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119422778 (samd1b)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
119422778 (samd1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119422778
NCBI-ProteinID:
XP_037546105
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All DBs
Position
16:complement(10731476..10744902)
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AA seq
611 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFAAAGGADAPREGTEHPNNNGDSFTEQEEDSEPSPG
LSAHTSACSPGERLKPKPACSPSSACLGCGATTSCAVGSGCVQEEKASARSDEGLGQQGE
GGCPERGAHSTRAPSGAREQPDLSGAEKKTSSGSGSPPQPPAQMETVSVKPKLRVAGGGG
RANSDLGDRLVASVRSLSERSLRGGASSSSSAASKGHMKPLGLKEILGSQEETLTRGKVK
VVMEREVSRGRLRRTRCGNITLPLRGEAREETAPAPPCADRLADSALQDEAAGKPPSPPL
GESEPMDAASEEEEEDDPRSSDQEGLPTVAMTTEPGHVEKTPEDAVILGSWKEEGPQQLV
EDDEVAGSSETSVLDFLPESRSPPAEGAALSQLNGAHVDKKVTASDHLHLEALSPAQHDG
TNHTSSSLNSLQCKTEVGVSSCMLTPTASPRDSGVFEEQGIDGSGGLLKSEGIRGSPVDW
TVSDVVRYFTAAGFPEQATAFRLQEIDGKSLLLMQRNDVLTGLSIKLGPALKIYERHVKV
LQKTHFEDDDC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgggagtggatcctagaaactatcgactctctccgttcg
aggaaagcccgtccggacctggagaggatttgtcgaatggtccggaggcgacacgggtca
gacccggaccgaaccaggacggagctggagaaactcatccaagagcagacggtgctcaaa
gttagctacaaggggtccatctcgtaccggaacgcggccaaggtgcagaggaaaagcaga
aagaagagtgagttcgcggccgctggcggcgcggatgcgccgagggagggaaccgaacat
ccgaacaacaacggcgacagcttcaccgagcaggaggaggactcggagcccagcccaggt
ctgagcgcgcacacatcagcctgcagccccggcgagaggctgaagccgaagcccgcctgc
agcccgagcagcgcgtgcctcggctgtggcgcaacaacgagctgcgcggtggggagcggc
tgcgtgcaggaggagaaagcaagtgcgcggagcgacgagggattaggacagcagggagag
gggggctgcccggagcgcggcgcgcacagcacgagagcaccgagcggagcccgtgaacag
cccgacttgtccggagctgagaagaaaacttcctctgggagcggcagccccccccagccc
ccggcgcagatggagacggtctctgtcaagcccaaacttcgcgtggcgggaggaggcggc
cgcgccaactcagacctgggggacagactggtggcttctgttcgcagcctgtccgagagg
agcctccgggggggcgcctcctcctcctcctccgccgcctccaaaggccacatgaagccg
ctgggcttgaaggagatcctgggcagccaggaggagacgctgacccgaggcaaagtcaag
gtggtcatggagagggaggtgtcgaggggcaggctgcgcaggacgcgctgcgggaacatc
actctcccgctgaggggggaggcgcgggaggagaccgcgccggcacctccgtgcgctgac
agacttgcggacagcgcactgcaggacgaggcggcgggaaagcctccttcgccgccgctc
ggggagagcgagccaatggacgctgccagcgaggaagaggaagaagatgatccccgcagt
tctgatcaggaaggactacccactgtcgccatgacaaccgaaccagggcacgttgagaaa
acgcccgaagatgctgtgatcctgggatcgtggaaggaggagggtccccagcagctggtg
gaggatgatgaagttgctggctcctcggagacgtcggtgctggattttctcccagaatct
cggtctccacctgctgagggagccgctctgtcgcagcttaacggtgcacacgtggacaag
aaagtgactgcctctgatcacttacatctagaagcactaagtcccgcgcagcacgacggc
acaaaccacacgtcctcaagcctcaacagcttgcagtgtaagacagaggtcggtgtgtct
tcctgcatgcttacgcccaccgcgtccccgagggactcgggcgtgtttgaagagcaaggt
attgacggcagtggaggacttctgaagtccgaaggcatcagagggagcccagtggactgg
accgtgtctgacgtggtccgttatttcacagctgcaggttttcctgagcaggcgacggcc
ttcaggctgcaggaaatcgatgggaagtctctcctcctcatgcagcgcaacgacgttttg
accggcctgtctatcaaacttggccccgccctcaagatctacgagcgtcacgtaaaggtt
ctgcagaaaacacacttcgaggacgatgactgctaa
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