Nematolebias whitei (Rio pearlfish): 119422814
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Entry
119422814 CDS
T08042
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04517
IgSF CAM signaling
nwh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119422814 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119422814 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119422814 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
119422814 (si:ch211-286b5.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
DUF6735
Motif
Other DBs
NCBI-GeneID:
119422814
NCBI-ProteinID:
XP_037546141
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All DBs
Position
16:complement(11883652..11897824)
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AA seq
437 aa
AA seq
DB search
MDSPGSMDSRFGQQGRSGLLKGPNTLEGCSLRTSWCATKQENRDQGDALREQLKEMDEHN
GRLQNMLRTERAKSSCLQLQCLQQEAELRRQELHCNKLKEKLSQLTDGQKGKGPSIEVLN
VPPGSRGKREHLSKPFRPNARQEEATLHLMLERREAELREAMKLRHSLTTLLHALRLDME
RSVTELMDVEQEGEGSLVETETSLGEDVTGGVIQSWRKVLKKLRDILSEGRTAASTDHDK
LMAQLETELKESQQLVRLQQQLLQDSLVSPLPLELSDSYYLEEWERLQMSLAELNRQRRT
FERERQAFTDAAIRLSRERHDLEQQRACYVKQQYLCASSPFGQGAQTSNGGESSAFGFSS
GRPTDVSGCHPITPSSTESGNEGGARVQTPDTPELYAALNLSYNHRSRHAEHQSEMWDGV
ADKRLHTPWPSYLDWSF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggactctccaggaagtatggattccagatttgggcagcaggggcgctcaggtctcctt
aagggtccaaacactctggaaggatgctctctaagaacatcctggtgtgctaccaaacag
gagaacagagaccaaggagatgcactcagggagcagctaaaagagatggatgaacacaat
ggcaggcttcagaacatgctgaggactgaacgggccaaaagctcctgtctgcagctgcag
tgtctccagcaagaggcagaactgaggcgtcaggagcttcactgcaacaagctgaaggag
aaactctcacagctgactgacgggcagaaaggcaaaggaccatccatagaggtgctgaac
gtcccacctggaagcagaggcaaaagagagcatctgagcaaaccgttcaggccaaacgca
agacaagaggaggcgacgctgcatctgatgctggagcgcagggaggcagagctgagagag
gccatgaagctgcgccacagcctcaccaccctcctgcacgcgctcagactcgacatggag
cggtctgtgacggagctgatggatgtggaacaagaaggagagggaagtctggttgaaact
gagacgtctctcggtgaagacgtgaccggaggagtcattcagagctggaggaaggtcctg
aagaaactgcgagacatcctttctgaaggtcgaactgctgctagcaccgaccacgacaaa
ctcatggctcagctagaaactgagctgaaagaaagtcagcagcttgtcagattacagcag
cagctcctgcaggacagccttgtctcgcctcttcccctcgagctctcagactcctattat
ttggaagaatgggaacgtcttcagatgtccttggcagagctgaatcgtcagaggaggact
tttgaaagggagcggcaggctttcactgacgccgccattcgactgagccgtgagcgccac
gatttggagcaacaaagagcctgttatgtgaagcagcaatatttgtgtgcgtcgtctccg
tttggccaaggagcacagaccagcaacgggggagagagctctgctttcggtttctccagt
gggaggcccacggacgtgtctggctgtcatcccatcactccatcatccactgagtctgga
aatgaaggaggagctcgggttcaaacccccgacacccctgagctgtacgctgccctcaat
ctgtcttacaatcacaggtccagacatgctgagcaccagtcggagatgtgggatggagta
gccgacaagcgactgcacacaccttggccttcctatttagactggtcattttaa
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