Nematolebias whitei (Rio pearlfish): 119422860
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Entry
119422860 CDS
T08042
Symbol
sec23b
Name
(RefSeq) protein transport protein Sec23B
KO
K14006
protein transport protein SEC23
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119422860 (sec23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119422860 (sec23b)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119422860 (sec23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
119422860
NCBI-ProteinID:
XP_037546195
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Position
16:13428904..13441632
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AA seq
767 aa
AA seq
DB search
MSTYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPNLPPVQYEPVV
CSRANCKAVLNPLCQVDFRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPAAPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKDLSSKQIQEMLGLTKPAASGQQGRPVAPQDAAAASCKFLQPVHLVDM
NLTDLLGELQKDPWPVPQGKRPLRSTGVALSVAVGLLEGTFPNTGARVMLFIGGPPTQGP
GMVVGDELKTPIRSWHDIQKDNARHLKKSTKYFEALANRSAANGHSVDIYACALDQTGLL
EMKCLSNLTGGHIVMGDSFNTSLFKQTFQRVFSKDYNGDFRMAFGGVLEVKTSRELKVCG
AIGPSVSLHSKGACVSENEMGIGGTSQWKVCGLNPSTTLGIYFEVVNQHNAPIPQGGRGA
IQFITQYQHSNTQKRIRVTTIARNWADAQSQIQHIESSFDQEAAAVLMARLGVFRAESEE
GPDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFVRQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILPDRILLMDTFFQLVI
YHGETIAQWRKAGYQEMAEYENFKQLLQAPLDDAQEILQTRFPMPRYVDTEHGGSQARFL
LSKVNPSQTHNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSST
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctaccaggagttcatccaacagaacgaggacagagatggtgtgaggttcagc
tggaacctttggccctccagccgtctggaagccactagattagtggttccagtctcttgc
ctctttacacctctaaaggaaaggccgaacctgccacctgttcagtatgagccagtcgtg
tgcagccgggcgaactgcaaagctgtgctcaacccactttgtcaagttgacttcagagcc
aaaatatgggcgtgcaacttctgcttccagagaaatccttttccgccctcctatgcaggc
atatcagacgtgaaccaaccagctgaactcatgcctcaattttctaccattgagtacata
gtacagcgggggcccgcagcccctctcatcttcctgtatgtcgtggacacatgtttggaa
gaagaggacctccaggccctcaaggagtccctgcagatgtccctgagcctgctaccgccc
aacgcgctggtgggcctcatcacattcggacgcatggttcaggttcatgagctcagctgt
gaggggatcgccaagagctacgtgttcaggggcaccaaggacctctcctccaaacagatc
caggagatgcttggtttgacgaagccggcagcttcaggacagcaaggtcgtcctgtggct
cctcaggacgccgccgctgcctcttgcaagttccttcagcccgtgcatcttgtggatatg
aatctgacagacttgcttggagagcttcagaaagatccctggcctgtccctcagggcaaa
aggcctctccgctccaccggtgtcgcactgtctgttgctgtcggccttctggaggggaca
ttcccaaacacgggggctcgtgtgatgcttttcattggcgggccgcccacccagggacca
ggcatggtggtgggagacgagttgaaaacccccatccgctcttggcatgacattcagaag
gacaacgcaaggcatttgaagaaatctactaagtattttgaagccttggccaaccggtct
gcagcaaacggccacagtgttgacatctatgcctgcgctctagaccagactggactgctg
gagatgaagtgtttgtccaatctcacagggggacacatcgtgatgggagactctttcaac
acgtctctgttcaaacaaaccttccagagagtttttagtaaggactacaatggagacttc
cgcatggcgtttggaggcgtcctagaagtcaagacctcaagagagctgaaggtatgtgga
gccattggaccaagtgtttctctccactccaagggagcctgtgtttctgagaacgagatg
ggtattggtggcacaagccagtggaaagtgtgcggtctcaacccctccacaactttgggc
atttactttgaagttgtgaatcagcacaatgcaccaattccccagggaggccgaggggcg
atccaatttatcacccagtaccagcactccaacacgcagaagaggatacgggtcaccacc
atcgcccggaactgggcagacgctcagtctcagattcagcacattgaatcgtcgtttgac
caagaggcagccgcggtgctcatggctcgcctgggcgtcttccgggcagagtcggaggag
ggaccagacgttctgcgctggcttgacaggcagctcatccgcctgtgtcagaagttcggc
cagttcaacaaagacgatccaacttccttcaaactgtcggagtccttgtccctctacccg
cagtttatgttccaccttcgtcggtcgccgttcctgcaagtgttcaacaacagtccagac
gagtcctcctattacaggcaccactttgtgagacaggacctgacccagtccctgatcatg
atccagccgatcctctactcgtactccttctacggaccaccagagcccgtgctcctggac
agcagcagcatactgccggatcgaatcctgctcatggacactttcttccagctggttatt
taccacggagagaccatagctcagtggagaaaggcaggctaccaggaaatggcagagtat
gagaatttcaagcagctgctccaggctcctctggatgacgctcaggagatcctgcagacg
cgcttccccatgcctcggtacgtcgacaccgagcacggaggctcacaggctcgcttcctg
ctctccaaagtcaacccatcacagacccacaacaacctctacgcatggggacaggagtca
ggagccccgatcctcactgatgatgtcagcttacaagtcttcatggatcacttgaagaaa
ctggctgtttccagctccacgtag
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