Nematolebias whitei (Rio pearlfish): 119422862
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Entry
119422862 CDS
T08042
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119422862 (tmc5)
03037 Cilium and associated proteins [BR:
nwh03037
]
119422862 (tmc5)
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119422862 (tmc5)
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119422862 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119422862
NCBI-ProteinID:
XP_037546198
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All DBs
Position
16:complement(13465264..13481446)
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AA seq
984 aa
AA seq
DB search
MTSYSTSGVFNPAYHDTETLEIDKRASRKPHHTNPYASEDMAWRGDRVDLRSDAEHGAHR
SGWQEESWRGGEGIPMGQISSDSNSASWQQNLNHGSFQTDGDSRYDSLSAAVQPLPSMSG
NMTMRWRGIAMRRMSMFPNTDPACTTFTEEVIRREVENEEQNLVKELIALSTREQIRQIR
ELPMSFEEKKHIWRQLTAFKSSKQSHHLRRFTDCSKNISLSFRRCAYGIQSARQTLELWH
GIMKEIGGKFGSSVLTYFVFLKWLLMFNVFSFLVNFGFITIPLLVHDLSPNIPSNVSFRG
LELLTGAGYFNYTVMYYGGYSNETLRGLVDYNLQLAYFFTIAVYMVLCGIVLIFSMASSF
KKNYAPADPASNSAWQLLCSWNFSITNERAVRLCKSNLRVQLKESLSEKYQTKQLTLSEK
LEHYGIYFGCWFLSTSLAFGCGASIFYLCQYEQKAVDSGPWSLLNEAKTLLVPFVVSLMN
MVIPLFFSLFNKYEQYSNPRSQIYALLLRNVLLRISILGVLCYYWMNVVPGKFSCWESMV
GQALYRLVVFDFLFLMLGSFFGEFLSNIIGTKLQPRLGVPEFDVAKNVLDLIYAQTLAWI
GIYFSPLLPAIQIVKFFILFYLKKVSLTQNCQPPRQSSRAAQMQTIFIVLLFFPFFVGAL
SMVAYAWNLTPSEQCGPFQGLNKTFSVVEIWISHLKQIHTSDWVVWIYENIIRSELFYFL
LTLIIIVIIYIFWQLIQGRKELIRLLQQQIVNEGKDKSFLLERLQDLQNSHPQITAKPIM
QQKPSRRRSGGLSSGSQSNSNAMVQVLLARQQLEEEEQRQNFCGVSVPSDISTSSATTQA
LLARQRAERQNEDFYQMSDEHPSSFNPLDQAMAARQRSQNDERDDYWSTTDFNETNPVNR
PDAVTQAMEARLRAEDGNDDHLDLASPVSSVMIQVMQARQRADEEERSQWTPAPLQNPDP
SGSSALIQAMLARQQAQNEYDDGY
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagtacaagtggagtttttaacccagcctaccatgacacggaaacactg
gaaattgataaaagggcttccaggaaaccccaccatacgaacccgtatgcgagtgaagac
atggcatggcggggtgacagggttgacctaagaagtgatgctgagcacggagcacacagg
agtggctggcaggaggagagctggagggggggcgaaggcatcccgatgggccaaatcagc
agtgattcaaacagtgcttcatggcagcaaaacctcaatcacggctcgtttcaaactgac
ggtgattctcgctatgactcactatcagcagctgttcaacctctgccttcaatgtcaggc
aacatgacaatgagatggagaggaattgcaatgagaaggatgagcatgtttcccaacact
gatccagcctgcactactttcacagaggaggttataaggagggaggtggaaaacgaggaa
caaaacctcgtcaaggaactcattgctctgtcaactcgagaacaaatacgtcagattcgg
gagcttccaatgagttttgaagagaagaaacatatatggcgacaattaacagcgttcaag
tcttctaaacaatctcaccacttgagacgtttcacagattgctccaaaaatatttcactg
tcttttcgaaggtgtgcttacggtatacagtcagccaggcagactctggaactgtggcac
ggcatcatgaaagagattggaggcaaatttggctccagtgttctcacctattttgtgttc
ctcaagtggcttctgatgttcaacgttttctctttcttggtcaactttggttttatcacc
attccactgcttgttcatgacctttcacccaacataccttcaaacgtgagcttcagaggg
ctggagttactgaccggagccggttacttcaactatactgttatgtactatggtggctac
agtaatgaaactctaaggggtctggtggattacaatctgcagctggcctatttcttcacc
attgctgtctacatggtgctgtgtgggattgtgctcatttttagcatggcaagctcattc
aagaagaactatgcaccagcagacccagcttcgaacagtgcatggcagcttctgtgcagc
tggaattttagtataaccaacgaacgagcagtcagactgtgcaagagcaatcttcgtgtc
caactcaaggaatctttatcagaaaaataccagacaaagcagctaacactttctgaaaaa
ttggaacactatgggatttactttggttgctggtttctctccaccagtctggcttttggc
tgtggagccagcatcttctacctctgccagtacgagcaaaaggcagtagactctggaccc
tggtctctgcttaatgaggcaaagacactcctggttccgtttgtggtgtcattgatgaac
atggtcattccgctcttcttctctctcttcaataaatatgagcagtactccaaccctcgc
agccagatttatgccctgttgcttagaaatgtgttgctcaggatttccatcctgggtgtt
ttatgttactactggatgaatgtggtacctgggaaattttcgtgttgggagtccatggtg
ggacaggctttgtaccgcctggtcgtttttgatttcctttttctgatgttgggatcattc
tttggagaatttcttagcaatatcattgggactaaacttcaaccacgtcttggggtgccg
gagtttgatgtagccaaaaatgttcttgatctcatctatgctcagactctagcctggatt
ggaatctacttttctcctctgctgcctgcgatccagattgtaaaattcttcatcttgttt
tacttaaaaaaggtcagcctgacccagaactgccagcctccgcggcagtcaagcagagca
gctcagatgcaaaccatcttcatcgttctcctcttcttccctttctttgtgggagccctg
tcgatggtcgcgtatgcgtggaatctgaccccctcagagcagtgtggacctttccaagga
ctcaacaaaaccttcagcgtggtggaaatctggatcagccatttaaaacaaattcataca
tctgactgggttgtgtggatctacgaaaacatcatcaggagtgaactcttctactttctc
ctcacgctcatcatcattgtcatcatttacatcttttggcaactcattcaaggccgcaag
gagctcatccgtctgctccaacagcagattgtaaacgagggaaaagacaagtccttcttg
ctagagagactacaagatctccagaattctcaccctcaaatcactgccaaacctataatg
caacaaaagccatcaaggcgacgctcaggtggcctctcctcgggaagtcagtccaactca
aacgccatggttcaggttttacttgctcgccagcagcttgaggaagaggagcagagacaa
aacttttgtggagtttctgttccctctgacatttccacatccagtgccactacacaggct
ttgttggcccgccagagagctgaaagacaaaatgaagacttttaccagatgtctgatgag
catccttcatcgttcaacccacttgaccaggccatggcagccaggcagagatctcagaac
gatgagcgggatgactactggagtacaactgattttaatgaaacaaaccccgtcaacaga
ccggacgctgtcacacaggccatggaggccagactgagagcagaggatggaaacgatgat
cacctggacctggcgtcaccggtgtcaagtgttatgattcaagtcatgcaagccaggcag
agagccgacgaagaggagaggagtcagtggacccctgctccgctgcagaacccagatcct
tctggctccagcgctctcatccaggccatgttggcccggcaacaggcacagaacgagtac
gatgatggttactga
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